RNA–Protein interactions for RNA: ENST00000242059.9

SCRN1-201, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRN1, Length 5,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-201ENST00000242059 DCAF8L2P0C7V8 631 aa17.25■□□□□ 0.35
SCRN1-201ENST00000242059 NISCHQ9Y2I1 1504 aa16.21■□□□□ 0.19
SCRN1-201ENST00000242059 FAM9AQ8IZU1 332 aaPredicted RBP16■□□□□ 0.15
SCRN1-201ENST00000242059 SUPT5HO00267 1087 aaKnown RBP15.57■□□□□ 0.08
SCRN1-201ENST00000242059 APLP2Q06481 763 aa15.42■□□□□ 0.06
SCRN1-201ENST00000242059 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
SCRN1-201ENST00000242059 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
SCRN1-201ENST00000242059 ATP1B4Q9UN42 357 aaPredicted RBP14.89□□□□□ -0.03
SCRN1-201ENST00000242059 PELP1Q8IZL8 1130 aaKnown RBP14.79□□□□□ -0.04
SCRN1-201ENST00000242059 MYT1LQ9UL68 1186 aa14.79□□□□□ -0.04
SCRN1-201ENST00000242059 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
SCRN1-201ENST00000242059 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
SCRN1-201ENST00000242059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.62□□□□□ -0.07
SCRN1-201ENST00000242059 HNRNPUL2Q1KMD3 747 aaKnown RBP14.62□□□□□ -0.07
SCRN1-201ENST00000242059 UBTFP17480 764 aaKnown RBP14.62□□□□□ -0.07
SCRN1-201ENST00000242059 MYT1Q01538 1121 aa14.57□□□□□ -0.08
SCRN1-201ENST00000242059 TTBK1Q5TCY1 1321 aaPredicted RBP14.49□□□□□ -0.09
SCRN1-201ENST00000242059 ABCC9O60706 1549 aa14.47□□□□□ -0.09
SCRN1-201ENST00000242059 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCRN1-201ENST00000242059 FBLN2P98095 1184 aa14.21□□□□□ -0.13
SCRN1-201ENST00000242059 CHIC1Q5VXU3 224 aa14.19□□□□□ -0.14
SCRN1-201ENST00000242059 PCGF6Q9BYE7 350 aa14.12□□□□□ -0.15
SCRN1-201ENST00000242059 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
SCRN1-201ENST00000242059 ESF1Q9H501 851 aaKnown RBP14.1□□□□□ -0.15
SCRN1-201ENST00000242059 CCER1Q8TC90 406 aaPredicted RBP14.09□□□□□ -0.15
SCRN1-201ENST00000242059 HRCP23327 699 aa14.07□□□□□ -0.16
SCRN1-201ENST00000242059 ZEB1P37275 1124 aaPredicted RBP14.04□□□□□ -0.16
SCRN1-201ENST00000242059 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
SCRN1-201ENST00000242059 BCANQ96GW7 911 aa13.97□□□□□ -0.17
SCRN1-201ENST00000242059 ITGAEP38570 1179 aa13.95□□□□□ -0.18
SCRN1-201ENST00000242059 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
SCRN1-201ENST00000242059 NEFLP07196 543 aa13.9□□□□□ -0.18
SCRN1-201ENST00000242059 CDK11AQ9UQ88 783 aaPredicted RBP13.88□□□□□ -0.19
SCRN1-201ENST00000242059 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
SCRN1-201ENST00000242059 ERICH6Q7L0X2 663 aa13.84□□□□□ -0.19
SCRN1-201ENST00000242059 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
SCRN1-201ENST00000242059 PPARGC1BQ86YN6 1023 aaKnown RBP13.76□□□□□ -0.21
SCRN1-201ENST00000242059 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
SCRN1-201ENST00000242059 FAM50AQ14320 339 aaKnown RBP13.75□□□□□ -0.21
SCRN1-201ENST00000242059 NEFMP07197 916 aa13.7□□□□□ -0.22
SCRN1-201ENST00000242059 PLPPR3Q6T4P5 718 aa13.65□□□□□ -0.22
SCRN1-201ENST00000242059 CHMP7Q8WUX9 453 aaPredicted RBP13.63□□□□□ -0.23
SCRN1-201ENST00000242059 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
SCRN1-201ENST00000242059 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
SCRN1-201ENST00000242059 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
SCRN1-201ENST00000242059 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
SCRN1-201ENST00000242059 SCRIBQ14160 1630 aa13.55□□□□□ -0.24
SCRN1-201ENST00000242059 CNGB1Q14028 1251 aaPredicted RBP13.52□□□□□ -0.25
SCRN1-201ENST00000242059 ARID3CA6NKF2 412 aa13.51□□□□□ -0.25
SCRN1-201ENST00000242059 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
SCRN1-201ENST00000242059 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
SCRN1-201ENST00000242059 LOC105371045A0A1W2PR82 267 aa13.5□□□□□ -0.25
SCRN1-201ENST00000242059 TRIM26Q12899 539 aaPredicted RBP13.49□□□□□ -0.25
SCRN1-201ENST00000242059 ZNF326Q5BKZ1 582 aaKnown RBP13.49□□□□□ -0.25
SCRN1-201ENST00000242059 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
SCRN1-201ENST00000242059 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
SCRN1-201ENST00000242059 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
SCRN1-201ENST00000242059 ARID4BQ4LE39 1312 aaPredicted RBP13.45□□□□□ -0.26
SCRN1-201ENST00000242059 CLSPNQ9HAW4 1339 aa13.42□□□□□ -0.26
SCRN1-201ENST00000242059 TSPY4P0CV99 314 aa13.4□□□□□ -0.26
SCRN1-201ENST00000242059 TSPY10P0CW01 314 aa13.4□□□□□ -0.26
SCRN1-201ENST00000242059 C14orf37Q86TY3 774 aa13.4□□□□□ -0.26
SCRN1-201ENST00000242059 NPM2Q86SE8 214 aaKnown RBP13.39□□□□□ -0.27
SCRN1-201ENST00000242059 YTHDC1Q96MU7 727 aaKnown RBP13.39□□□□□ -0.27
SCRN1-201ENST00000242059 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
SCRN1-201ENST00000242059 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
SCRN1-201ENST00000242059 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
SCRN1-201ENST00000242059 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
SCRN1-201ENST00000242059 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
SCRN1-201ENST00000242059 ZCCHC6Q5VYS8 1495 aaKnown RBP13.34□□□□□ -0.27
SCRN1-201ENST00000242059 NEUROD1Q13562 356 aa13.33□□□□□ -0.27
SCRN1-201ENST00000242059 PLEKHD1A6NEE1 506 aa13.3□□□□□ -0.28
SCRN1-201ENST00000242059 A0A0G2JS52 829 aa13.29□□□□□ -0.28
SCRN1-201ENST00000242059 CCDC180Q9P1Z9 1646 aa13.27□□□□□ -0.29
SCRN1-201ENST00000242059 CANXP27824 592 aaKnown RBP13.27□□□□□ -0.29
SCRN1-201ENST00000242059 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
SCRN1-201ENST00000242059 ACIN1Q9UKV3 1341 aaKnown RBP13.26□□□□□ -0.29
SCRN1-201ENST00000242059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.293e-8■□□□□ 8.7
SCRN1-201ENST00000242059 NACADO15069 1562 aa13.23□□□□□ -0.29
SCRN1-201ENST00000242059 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.29
SCRN1-201ENST00000242059 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
SCRN1-201ENST00000242059 HDGFP51858 240 aaKnown RBP13.19□□□□□ -0.3
SCRN1-201ENST00000242059 ANP32CO43423 234 aa13.16□□□□□ -0.3
SCRN1-201ENST00000242059 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
SCRN1-201ENST00000242059 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
SCRN1-201ENST00000242059 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
SCRN1-201ENST00000242059 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
SCRN1-201ENST00000242059 RSF1Q96T23 1441 aaPredicted RBP13.09□□□□□ -0.31
SCRN1-201ENST00000242059 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
SCRN1-201ENST00000242059 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
SCRN1-201ENST00000242059 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
SCRN1-201ENST00000242059 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
SCRN1-201ENST00000242059 CFDP1Q9UEE9 299 aaPredicted RBP13□□□□□ -0.33
SCRN1-201ENST00000242059 DCAF1Q9Y4B6 1507 aa12.99□□□□□ -0.33
SCRN1-201ENST00000242059 NPHP1O15259 732 aa12.99□□□□□ -0.33
SCRN1-201ENST00000242059 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
SCRN1-201ENST00000242059 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
SCRN1-201ENST00000242059 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
SCRN1-201ENST00000242059 KANK1Q14678 1352 aa12.97□□□□□ -0.33
SCRN1-201ENST00000242059 KIF27Q86VH2 1401 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms