RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 KDM6BO15054 1643 aa17.79■□□□□ 0.44
NDUFB3-201ENST00000237889 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
NDUFB3-201ENST00000237889 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
NDUFB3-201ENST00000237889 FBXO41Q8TF61 875 aa17.75■□□□□ 0.43
NDUFB3-201ENST00000237889 MAPKBP1O60336 1514 aa17.74■□□□□ 0.43
NDUFB3-201ENST00000237889 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
NDUFB3-201ENST00000237889 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.43
NDUFB3-201ENST00000237889 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
NDUFB3-201ENST00000237889 DIP2BQ9P265 1576 aa17.67■□□□□ 0.42
NDUFB3-201ENST00000237889 ADGRL1O94910 1474 aa17.66■□□□□ 0.42
NDUFB3-201ENST00000237889 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
NDUFB3-201ENST00000237889 HECW2Q9P2P5 1572 aa17.6■□□□□ 0.41
NDUFB3-201ENST00000237889 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
NDUFB3-201ENST00000237889 ADCY10Q96PN6 1610 aa17.51■□□□□ 0.39
NDUFB3-201ENST00000237889 TSPOAP1O95153 1857 aa17.5■□□□□ 0.39
NDUFB3-201ENST00000237889 PTPRGP23470 1445 aa17.5■□□□□ 0.39
NDUFB3-201ENST00000237889 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
NDUFB3-201ENST00000237889 TTBK1Q5TCY1 1321 aaPredicted RBP17.47■□□□□ 0.39
NDUFB3-201ENST00000237889 LMTK3Q96Q04 1460 aa17.45■□□□□ 0.38
NDUFB3-201ENST00000237889 ASXL2Q76L83 1435 aa17.44■□□□□ 0.38
NDUFB3-201ENST00000237889 KIAA0586Q9BVV6 1533 aa17.43■□□□□ 0.38
NDUFB3-201ENST00000237889 TEX14Q8IWB6 1497 aa17.43■□□□□ 0.38
NDUFB3-201ENST00000237889 ABCC2Q92887 1545 aa17.41■□□□□ 0.38
NDUFB3-201ENST00000237889 GLI2P10070 1586 aa17.4■□□□□ 0.38
NDUFB3-201ENST00000237889 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
NDUFB3-201ENST00000237889 TOP2BQ02880 1626 aa17.39■□□□□ 0.38
NDUFB3-201ENST00000237889 CARMIL2Q6F5E8 1435 aa17.39■□□□□ 0.38
NDUFB3-201ENST00000237889 COL17A1Q9UMD9 1497 aaPredicted RBP17.38■□□□□ 0.37
NDUFB3-201ENST00000237889 TNIKQ9UKE5 1360 aa17.38■□□□□ 0.37
NDUFB3-201ENST00000237889 SOCS7O14512 581 aa17.35■□□□□ 0.37
NDUFB3-201ENST00000237889 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
NDUFB3-201ENST00000237889 ADRA2BP18089 450 aa17.29■□□□□ 0.36
NDUFB3-201ENST00000237889 EPRSP07814 1512 aaKnown RBP17.29■□□□□ 0.36
NDUFB3-201ENST00000237889 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
NDUFB3-201ENST00000237889 UHRF1BP1LA0JNW5 1464 aa17.28■□□□□ 0.36
NDUFB3-201ENST00000237889 BIVM-ERCC5R4GMW8 1640 aa17.27■□□□□ 0.36
NDUFB3-201ENST00000237889 MSH5O43196 834 aa17.26■□□□□ 0.35
NDUFB3-201ENST00000237889 PPRC1Q5VV67 1664 aaKnown RBP17.25■□□□□ 0.35
NDUFB3-201ENST00000237889 IGF1RP08069 1367 aa17.25■□□□□ 0.35
NDUFB3-201ENST00000237889 DISP3Q9P2K9 1392 aa17.25■□□□□ 0.35
NDUFB3-201ENST00000237889 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
NDUFB3-201ENST00000237889 KDM5BQ9UGL1 1544 aa17.19■□□□□ 0.34
NDUFB3-201ENST00000237889 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
NDUFB3-201ENST00000237889 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
NDUFB3-201ENST00000237889 MAP3K4Q9Y6R4 1608 aa17.18■□□□□ 0.34
NDUFB3-201ENST00000237889 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
NDUFB3-201ENST00000237889 CERKQ8TCT0 537 aa17.18■□□□□ 0.34
NDUFB3-201ENST00000237889 KCNH8Q96L42 1107 aa17.17■□□□□ 0.34
NDUFB3-201ENST00000237889 PTPRMP28827 1452 aa17.16■□□□□ 0.34
NDUFB3-201ENST00000237889 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
NDUFB3-201ENST00000237889 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
NDUFB3-201ENST00000237889 WDR7Q9Y4E6 1490 aa17.13■□□□□ 0.33
NDUFB3-201ENST00000237889 MAGI3Q5TCQ9 1506 aa17.13■□□□□ 0.33
NDUFB3-201ENST00000237889 ARID4BQ4LE39 1312 aaPredicted RBP17.13■□□□□ 0.33
NDUFB3-201ENST00000237889 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
NDUFB3-201ENST00000237889 CUL7Q14999 1698 aa17.11■□□□□ 0.33
NDUFB3-201ENST00000237889 FAM9AQ8IZU1 332 aaPredicted RBP17.1■□□□□ 0.33
NDUFB3-201ENST00000237889 PHLDB1Q86UU1 1377 aa17.07■□□□□ 0.32
NDUFB3-201ENST00000237889 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
NDUFB3-201ENST00000237889 IQGAP2Q13576 1575 aa17.05■□□□□ 0.32
NDUFB3-201ENST00000237889 DISP1Q96F81 1524 aa17.03■□□□□ 0.32
NDUFB3-201ENST00000237889 HSPA2P54652 639 aa17.03■□□□□ 0.32
NDUFB3-201ENST00000237889 ARAP3Q8WWN8 1544 aa17.02■□□□□ 0.32
NDUFB3-201ENST00000237889 ZCCHC11Q5TAX3 1644 aaKnown RBP17.01■□□□□ 0.31
NDUFB3-201ENST00000237889 KIF21BO75037 1637 aa17■□□□□ 0.31
NDUFB3-201ENST00000237889 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
NDUFB3-201ENST00000237889 RAPGEF3O95398 923 aa16.98■□□□□ 0.31
NDUFB3-201ENST00000237889 CFAP43Q8NDM7 1665 aa16.96■□□□□ 0.31
NDUFB3-201ENST00000237889 ADAMTSL3P82987 1691 aa16.95■□□□□ 0.3
NDUFB3-201ENST00000237889 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
NDUFB3-201ENST00000237889 POGZQ7Z3K3 1410 aa16.91■□□□□ 0.3
NDUFB3-201ENST00000237889 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
NDUFB3-201ENST00000237889 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
NDUFB3-201ENST00000237889 NEO1Q92859 1461 aa16.85■□□□□ 0.29
NDUFB3-201ENST00000237889 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
NDUFB3-201ENST00000237889 MADDQ8WXG6 1647 aa16.85■□□□□ 0.29
NDUFB3-201ENST00000237889 SPATA31D1Q6ZQQ2 1576 aa16.84■□□□□ 0.29
NDUFB3-201ENST00000237889 BCORL1Q5H9F3 1711 aa16.83■□□□□ 0.28
NDUFB3-201ENST00000237889 YEATS2Q9ULM3 1422 aa16.82■□□□□ 0.28
NDUFB3-201ENST00000237889 ARID3CA6NKF2 412 aa16.82■□□□□ 0.28
NDUFB3-201ENST00000237889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
NDUFB3-201ENST00000237889 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
NDUFB3-201ENST00000237889 AKNAQ7Z591 1439 aa16.79■□□□□ 0.28
NDUFB3-201ENST00000237889 MLECQ14165 292 aa16.78■□□□□ 0.28
NDUFB3-201ENST00000237889 FANCAO15360 1455 aa16.78■□□□□ 0.28
NDUFB3-201ENST00000237889 ABCA8O94911 1581 aa16.77■□□□□ 0.27
NDUFB3-201ENST00000237889 DENND4BO75064 1496 aaPredicted RBP16.75■□□□□ 0.27
NDUFB3-201ENST00000237889 RIMS1Q86UR5 1692 aaKnown RBP16.74■□□□□ 0.27
NDUFB3-201ENST00000237889 ATP10BO94823 1461 aa16.73■□□□□ 0.27
NDUFB3-201ENST00000237889 ABCA9Q8IUA7 1624 aa16.7■□□□□ 0.26
NDUFB3-201ENST00000237889 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
NDUFB3-201ENST00000237889 PLEKHD1A6NEE1 506 aa16.69■□□□□ 0.26
NDUFB3-201ENST00000237889 ARHGEF40Q8TER5 1519 aa16.67■□□□□ 0.26
NDUFB3-201ENST00000237889 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
NDUFB3-201ENST00000237889 PTPRTO14522 1441 aa16.67■□□□□ 0.26
NDUFB3-201ENST00000237889 MAGI2Q86UL8 1455 aa16.67■□□□□ 0.26
NDUFB3-201ENST00000237889 UHRF1BP1Q6BDS2 1440 aa16.66■□□□□ 0.26
NDUFB3-201ENST00000237889 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
NDUFB3-201ENST00000237889 IQSEC2Q5JU85 1478 aa16.64■□□□□ 0.25
NDUFB3-201ENST00000237889 UBAP1LF5GYI3 381 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms