RNA–Protein interactions for RNA: ENST00000226382.3

PHOX2B-201, Transcript of paired like homeobox 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2B, Length 3,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2B-201ENST00000226382 KIF27Q86VH2 1401 aa29.13■■■□□ 2.25
PHOX2B-201ENST00000226382 PEG3Q9GZU2 1588 aa29.12■■■□□ 2.25
PHOX2B-201ENST00000226382 ANP32CO43423 234 aa29.12■■■□□ 2.25
PHOX2B-201ENST00000226382 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
PHOX2B-201ENST00000226382 MAPKBP1O60336 1514 aa29.1■■■□□ 2.25
PHOX2B-201ENST00000226382 SETD5Q9C0A6 1442 aa29.06■■■□□ 2.24
PHOX2B-201ENST00000226382 PPP1R15AO75807 674 aaPredicted RBP29.06■■■□□ 2.24
PHOX2B-201ENST00000226382 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
PHOX2B-201ENST00000226382 PHLDB1Q86UU1 1377 aa29.04■■■□□ 2.24
PHOX2B-201ENST00000226382 CUX1P39880 1505 aa29.01■■■□□ 2.23
PHOX2B-201ENST00000226382 ANO8Q9HCE9 1232 aaPredicted RBP28.98■■■□□ 2.23
PHOX2B-201ENST00000226382 CUX2O14529 1486 aa28.96■■■□□ 2.23
PHOX2B-201ENST00000226382 HNRNPUQ00839 825 aaKnown RBP eCLIP28.95■■■□□ 2.22
PHOX2B-201ENST00000226382 MSH5O43196 834 aa28.87■■■□□ 2.21
PHOX2B-201ENST00000226382 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
PHOX2B-201ENST00000226382 CNGB1Q14028 1251 aaPredicted RBP28.86■■■□□ 2.21
PHOX2B-201ENST00000226382 TONSLQ96HA7 1378 aa28.84■■■□□ 2.21
PHOX2B-201ENST00000226382 IGF1RP08069 1367 aa28.84■■■□□ 2.21
PHOX2B-201ENST00000226382 CARMIL1Q5VZK9 1371 aa28.8■■■□□ 2.2
PHOX2B-201ENST00000226382 LRRC9Q6ZRR7 1453 aa28.8■■■□□ 2.2
PHOX2B-201ENST00000226382 CCER2I3L3R5 266 aa28.79■■■□□ 2.2
PHOX2B-201ENST00000226382 TIAM1Q13009 1591 aa28.77■■■□□ 2.2
PHOX2B-201ENST00000226382 FHOD3Q2V2M9 1422 aa28.73■■■□□ 2.19
PHOX2B-201ENST00000226382 SENP3-EIF4A1A0A087X0R7 540 aa28.71■■■□□ 2.19
PHOX2B-201ENST00000226382 CDK11AQ9UQ88 783 aaPredicted RBP28.7■■■□□ 2.18
PHOX2B-201ENST00000226382 CHIC2Q9UKJ5 165 aa28.68■■■□□ 2.18
PHOX2B-201ENST00000226382 FAM9BQ8IZU0 186 aa28.65■■■□□ 2.18
PHOX2B-201ENST00000226382 CCDC184Q52MB2 194 aa28.64■■■□□ 2.18
PHOX2B-201ENST00000226382 RRP7BPQ9NSQ0 103 aa28.61■■■□□ 2.17
PHOX2B-201ENST00000226382 ARID3CA6NKF2 412 aa28.59■■■□□ 2.17
PHOX2B-201ENST00000226382 B4GALNT3Q6L9W6 998 aa28.59■■■□□ 2.17
PHOX2B-201ENST00000226382 TIMELESSQ9UNS1 1208 aa28.58■■■□□ 2.17
PHOX2B-201ENST00000226382 CFTRP13569 1480 aa28.55■■■□□ 2.16
PHOX2B-201ENST00000226382 HSPA5P11021 654 aaKnown RBP28.54■■■□□ 2.16
PHOX2B-201ENST00000226382 FHAD1B1AJZ9 1412 aa28.54■■■□□ 2.16
PHOX2B-201ENST00000226382 FOXD1Q16676 465 aa28.53■■■□□ 2.16
PHOX2B-201ENST00000226382 PCF11O94913 1555 aaKnown RBP28.53■■■□□ 2.16
PHOX2B-201ENST00000226382 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
PHOX2B-201ENST00000226382 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
PHOX2B-201ENST00000226382 WASHC2AQ641Q2 1341 aa28.49■■■□□ 2.15
PHOX2B-201ENST00000226382 NCAPD3P42695 1498 aa28.48■■■□□ 2.15
PHOX2B-201ENST00000226382 CCDC18Q5T9S5 1454 aa28.48■■■□□ 2.15
PHOX2B-201ENST00000226382 POLR3GLQ9BT43 218 aa28.48■■■□□ 2.15
PHOX2B-201ENST00000226382 PTPRKQ15262 1439 aa28.47■■■□□ 2.15
PHOX2B-201ENST00000226382 CCDC136Q96JN2 1154 aa28.46■■■□□ 2.15
PHOX2B-201ENST00000226382 SLC24A1O60721 1099 aa28.45■■■□□ 2.14
PHOX2B-201ENST00000226382 SALL2Q9Y467 1007 aaPredicted RBP28.43■■■□□ 2.14
PHOX2B-201ENST00000226382 MRS2Q9HD23 443 aa28.43■■■□□ 2.14
PHOX2B-201ENST00000226382 AQRO60306 1485 aaKnown RBP eCLIP28.41■■■□□ 2.14
PHOX2B-201ENST00000226382 NBR1Q14596 966 aa28.4■■■□□ 2.14
PHOX2B-201ENST00000226382 FGD6Q6ZV73 1430 aa28.4■■■□□ 2.14
PHOX2B-201ENST00000226382 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.13
PHOX2B-201ENST00000226382 MAP3K1Q13233 1512 aa28.38■■■□□ 2.13
PHOX2B-201ENST00000226382 C11orf95C9JLR9 678 aaPredicted RBP28.38■■■□□ 2.13
PHOX2B-201ENST00000226382 UBE2Q2Q8WVN8 375 aa28.36■■■□□ 2.13
PHOX2B-201ENST00000226382 EIF4G2P78344 907 aaKnown RBP eCLIP28.35■■■□□ 2.13
PHOX2B-201ENST00000226382 FANCIQ9NVI1 1328 aa28.35■■■□□ 2.13
PHOX2B-201ENST00000226382 PPP4R2Q9NY27 417 aa28.35■■■□□ 2.13
PHOX2B-201ENST00000226382 EIF5BO60841 1220 aaKnown RBP28.34■■■□□ 2.13
PHOX2B-201ENST00000226382 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
PHOX2B-201ENST00000226382 UACAQ9BZF9 1416 aa28.31■■■□□ 2.12
PHOX2B-201ENST00000226382 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
PHOX2B-201ENST00000226382 L3MBTL2Q969R5 705 aa28.29■■■□□ 2.12
PHOX2B-201ENST00000226382 NAIPQ13075 1403 aa28.25■■■□□ 2.11
PHOX2B-201ENST00000226382 ZNF326Q5BKZ1 582 aaKnown RBP28.25■■■□□ 2.11
PHOX2B-201ENST00000226382 CASKIN1Q8WXD9 1431 aa28.24■■■□□ 2.11
PHOX2B-201ENST00000226382 PRKRIP1Q9H875 184 aaPredicted RBP28.24■■■□□ 2.11
PHOX2B-201ENST00000226382 HFM1A2PYH4 1435 aa28.23■■■□□ 2.11
PHOX2B-201ENST00000226382 CFAP43Q8NDM7 1665 aa28.21■■■□□ 2.11
PHOX2B-201ENST00000226382 DEKP35659 375 aaKnown RBP28.21■■■□□ 2.11
PHOX2B-201ENST00000226382 FYCO1Q9BQS8 1478 aa28.21■■■□□ 2.11
PHOX2B-201ENST00000226382 PAK3O75914 559 aaPredicted RBP28.19■■■□□ 2.1
PHOX2B-201ENST00000226382 MPHOSPH9Q99550 1183 aa28.16■■■□□ 2.1
PHOX2B-201ENST00000226382 PTPN23Q9H3S7 1636 aa28.15■■■□□ 2.1
PHOX2B-201ENST00000226382 FMN1Q68DA7 1419 aa28.15■■■□□ 2.1
PHOX2B-201ENST00000226382 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
PHOX2B-201ENST00000226382 NCOA2Q15596 1464 aa28.15■■■□□ 2.1
PHOX2B-201ENST00000226382 NBPF8Q3BBV2 869 aa28.13■■■□□ 2.09
PHOX2B-201ENST00000226382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.1■■■□□ 2.09
PHOX2B-201ENST00000226382 MYOM3Q5VTT5 1437 aa28.09■■■□□ 2.09
PHOX2B-201ENST00000226382 CNTLNQ9NXG0 1405 aa28.09■■■□□ 2.09
PHOX2B-201ENST00000226382 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
PHOX2B-201ENST00000226382 AKNAQ7Z591 1439 aa28.07■■■□□ 2.08
PHOX2B-201ENST00000226382 NOP58Q9Y2X3 529 aaKnown RBP28.07■■■□□ 2.08
PHOX2B-201ENST00000226382 KDM5BQ9UGL1 1544 aa28.07■■■□□ 2.08
PHOX2B-201ENST00000226382 CCDC7Q96M83 1385 aa28.07■■■□□ 2.08
PHOX2B-201ENST00000226382 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.05■■■□□ 2.08
PHOX2B-201ENST00000226382 ZBED9Q6R2W3 1325 aa28.04■■■□□ 2.08
PHOX2B-201ENST00000226382 KIF7Q2M1P5 1343 aa28.03■■■□□ 2.08
PHOX2B-201ENST00000226382 NPM2Q86SE8 214 aaKnown RBP28.02■■■□□ 2.08
PHOX2B-201ENST00000226382 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
PHOX2B-201ENST00000226382 SLC4A1APQ9BWU0 796 aaKnown RBP28■■■□□ 2.07
PHOX2B-201ENST00000226382 SNAPC4Q5SXM2 1469 aa27.99■■■□□ 2.07
PHOX2B-201ENST00000226382 NESP48681 1621 aa27.98■■■□□ 2.07
PHOX2B-201ENST00000226382 ERICH6BQ5W0A0 696 aa27.97■■■□□ 2.07
PHOX2B-201ENST00000226382 PLEKHG5O94827 1062 aa27.96■■■□□ 2.07
PHOX2B-201ENST00000226382 DENND4BO75064 1496 aaPredicted RBP27.95■■■□□ 2.06
PHOX2B-201ENST00000226382 ZNF644Q9H582 1327 aaPredicted RBP27.94■■■□□ 2.06
PHOX2B-201ENST00000226382 EFCAB5A4FU69 1503 aa27.94■■■□□ 2.06
PHOX2B-201ENST00000226382 KDM6BO15054 1643 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms