RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 ERICH3Q5RHP9 1530 aa8.27□□□□□ -1.09
RUFY3-201ENST00000226328 FHAD1B1AJZ9 1412 aa8.27□□□□□ -1.09
RUFY3-201ENST00000226328 ADAMTS12P58397 1594 aa8.27□□□□□ -1.09
RUFY3-201ENST00000226328 SNAPC4Q5SXM2 1469 aa8.25□□□□□ -1.09
RUFY3-201ENST00000226328 P3H3Q8IVL6 736 aa8.25□□□□□ -1.09
RUFY3-201ENST00000226328 CLASP1Q7Z460 1538 aa8.24□□□□□ -1.09
RUFY3-201ENST00000226328 SYNJ2O15056 1496 aa8.23□□□□□ -1.09
RUFY3-201ENST00000226328 CUL7Q14999 1698 aa8.21□□□□□ -1.1
RUFY3-201ENST00000226328 ARID3CA6NKF2 412 aa8.2□□□□□ -1.1
RUFY3-201ENST00000226328 PLEKHD1A6NEE1 506 aa8.19□□□□□ -1.1
RUFY3-201ENST00000226328 SHROOM2Q13796 1616 aa8.19□□□□□ -1.1
RUFY3-201ENST00000226328 PTPRGP23470 1445 aa8.19□□□□□ -1.1
RUFY3-201ENST00000226328 CEP170Q5SW79 1584 aa8.18□□□□□ -1.1
RUFY3-201ENST00000226328 KCNH8Q96L42 1107 aa8.18□□□□□ -1.1
RUFY3-201ENST00000226328 RAPGEF2Q9Y4G8 1499 aa8.18□□□□□ -1.1
RUFY3-201ENST00000226328 NUP160Q12769 1436 aa8.18□□□□□ -1.1
RUFY3-201ENST00000226328 GRIN2AQ12879 1464 aa8.18□□□□□ -1.1
RUFY3-201ENST00000226328 GOLGA3Q08378 1498 aa8.17□□□□□ -1.1
RUFY3-201ENST00000226328 ESF1Q9H501 851 aaKnown RBP8.17□□□□□ -1.1
RUFY3-201ENST00000226328 AEBP2Q6ZN18 517 aaPredicted RBP8.16□□□□□ -1.1
RUFY3-201ENST00000226328 IGF1RP08069 1367 aa8.16□□□□□ -1.1
RUFY3-201ENST00000226328 RUSC2Q8N2Y8 1516 aa8.15□□□□□ -1.1
RUFY3-201ENST00000226328 RIMBP3CA6NJZ7 1639 aa8.15□□□□□ -1.1
RUFY3-201ENST00000226328 RIMBP3BA6NNM3 1639 aa8.15□□□□□ -1.1
RUFY3-201ENST00000226328 RIMBP3Q9UFD9 1639 aa8.15□□□□□ -1.1
RUFY3-201ENST00000226328 PRG4Q92954 1404 aaPredicted RBP8.15□□□□□ -1.1
RUFY3-201ENST00000226328 FAM69CQ0P6D2 419 aa8.13□□□□□ -1.11
RUFY3-201ENST00000226328 TNIKQ9UKE5 1360 aa8.12□□□□□ -1.11
RUFY3-201ENST00000226328 ARHGEF11O15085 1522 aa8.12□□□□□ -1.11
RUFY3-201ENST00000226328 KIAA0586Q9BVV6 1533 aa8.1□□□□□ -1.11
RUFY3-201ENST00000226328 PRXQ9BXM0 1461 aa8.09□□□□□ -1.11
RUFY3-201ENST00000226328 ARID4BQ4LE39 1312 aaPredicted RBP8.08□□□□□ -1.12
RUFY3-201ENST00000226328 ARAP1Q96P48 1450 aa8.07□□□□□ -1.12
RUFY3-201ENST00000226328 CTTNBP2Q8WZ74 1663 aa8.07□□□□□ -1.12
RUFY3-201ENST00000226328 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
RUFY3-201ENST00000226328 ERCC6L2Q5T890 1561 aa8.06□□□□□ -1.12
RUFY3-201ENST00000226328 KIF21BO75037 1637 aa8.05□□□□□ -1.12
RUFY3-201ENST00000226328 CLIP1P30622 1438 aa8.04□□□□□ -1.12
RUFY3-201ENST00000226328 MTUS2Q5JR59 1369 aa8.04□□□□□ -1.12
RUFY3-201ENST00000226328 FMN1Q68DA7 1419 aa8.04□□□□□ -1.12
RUFY3-201ENST00000226328 IQGAP2Q13576 1575 aa8.03□□□□□ -1.12
RUFY3-201ENST00000226328 UGGT2Q9NYU1 1516 aa8.03□□□□□ -1.12
RUFY3-201ENST00000226328 EFCAB2Q5VUJ9 269 aa8.02□□□□□ -1.13
RUFY3-201ENST00000226328 UACAQ9BZF9 1416 aa8□□□□□ -1.13
RUFY3-201ENST00000226328 DISP1Q96F81 1524 aa8□□□□□ -1.13
RUFY3-201ENST00000226328 LOC105371045A0A1W2PR82 267 aa8□□□□□ -1.13
RUFY3-201ENST00000226328 TSPY4P0CV99 314 aa8□□□□□ -1.13
RUFY3-201ENST00000226328 TSPY10P0CW01 314 aa8□□□□□ -1.13
RUFY3-201ENST00000226328 KIAA0556O60303 1618 aa7.99□□□□□ -1.13
RUFY3-201ENST00000226328 SAMD9Q5K651 1589 aa7.99□□□□□ -1.13
RUFY3-201ENST00000226328 PLPPR3Q6T4P5 718 aa7.99□□□□□ -1.13
RUFY3-201ENST00000226328 PLB1Q6P1J6 1458 aa7.97□□□□□ -1.13
RUFY3-201ENST00000226328 CFDP1Q9UEE9 299 aaPredicted RBP7.97□□□□□ -1.13
RUFY3-201ENST00000226328 ADCY10Q96PN6 1610 aa7.96□□□□□ -1.13
RUFY3-201ENST00000226328 FAM50AQ14320 339 aaKnown RBP7.96□□□□□ -1.14
RUFY3-201ENST00000226328 FHOD3Q2V2M9 1422 aa7.95□□□□□ -1.14
RUFY3-201ENST00000226328 UHRF1BP1LA0JNW5 1464 aa7.94□□□□□ -1.14
RUFY3-201ENST00000226328 CCNB3Q8WWL7 1395 aa7.94□□□□□ -1.14
RUFY3-201ENST00000226328 TEX14Q8IWB6 1497 aa7.92□□□□□ -1.14
RUFY3-201ENST00000226328 ITGAEP38570 1179 aa7.92□□□□□ -1.14
RUFY3-201ENST00000226328 MAPKBP1O60336 1514 aa7.92□□□□□ -1.14
RUFY3-201ENST00000226328 ABCA8O94911 1581 aa7.92□□□□□ -1.14
RUFY3-201ENST00000226328 EFCAB5A4FU69 1503 aa7.91□□□□□ -1.14
RUFY3-201ENST00000226328 STAG3Q9UJ98 1225 aa7.91□□□□□ -1.14
RUFY3-201ENST00000226328 MLECQ14165 292 aa7.9□□□□□ -1.14
RUFY3-201ENST00000226328 ABCC2Q92887 1545 aa7.9□□□□□ -1.15
RUFY3-201ENST00000226328 CCDC18Q5T9S5 1454 aa7.9□□□□□ -1.15
RUFY3-201ENST00000226328 CD109Q6YHK3 1445 aa7.9□□□□□ -1.15
RUFY3-201ENST00000226328 CEP162Q5TB80 1403 aa7.89□□□□□ -1.15
RUFY3-201ENST00000226328 RSPH4AQ5TD94 716 aa7.89□□□□□ -1.15
RUFY3-201ENST00000226328 PHLDB1Q86UU1 1377 aa7.88□□□□□ -1.15
RUFY3-201ENST00000226328 ASXL2Q76L83 1435 aa7.88□□□□□ -1.15
RUFY3-201ENST00000226328 KIF13AQ9H1H9 1805 aa7.88□□□□□ -1.15
RUFY3-201ENST00000226328 KDM5BQ9UGL1 1544 aa7.87□□□□□ -1.15
RUFY3-201ENST00000226328 BCANQ96GW7 911 aa7.87□□□□□ -1.15
RUFY3-201ENST00000226328 POGZQ7Z3K3 1410 aa7.87□□□□□ -1.15
RUFY3-201ENST00000226328 ZCCHC11Q5TAX3 1644 aaKnown RBP7.87□□□□□ -1.15
RUFY3-201ENST00000226328 SPAG9O60271 1321 aaKnown RBP7.85□□□□□ -1.15
RUFY3-201ENST00000226328 DIP2BQ9P265 1576 aa7.85□□□□□ -1.15
RUFY3-201ENST00000226328 RAPGEF6Q8TEU7 1601 aa7.84□□□□□ -1.15
RUFY3-201ENST00000226328 GLI2P10070 1586 aa7.84□□□□□ -1.15
RUFY3-201ENST00000226328 TRIM52Q96A61 297 aa7.83□□□□□ -1.16
RUFY3-201ENST00000226328 ARHGAP35Q9NRY4 1499 aa7.83□□□□□ -1.16
RUFY3-201ENST00000226328 PPARGC1BQ86YN6 1023 aaKnown RBP7.83□□□□□ -1.16
RUFY3-201ENST00000226328 WDR7Q9Y4E6 1490 aa7.83□□□□□ -1.16
RUFY3-201ENST00000226328 RTN4Q9NQC3 1192 aaKnown RBP7.82□□□□□ -1.16
RUFY3-201ENST00000226328 ABCC10Q5T3U5 1492 aa7.82□□□□□ -1.16
RUFY3-201ENST00000226328 LRRIQ1Q96JM4 1722 aa7.82□□□□□ -1.16
RUFY3-201ENST00000226328 PPRC1Q5VV67 1664 aaKnown RBP7.82□□□□□ -1.16
RUFY3-201ENST00000226328 MAP3K4Q9Y6R4 1608 aa7.82□□□□□ -1.16
RUFY3-201ENST00000226328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.82□□□□□ -1.164e-10■■□□□ 11.6
RUFY3-201ENST00000226328 GGT6Q6P531 493 aa7.81□□□□□ -1.16
RUFY3-201ENST00000226328 KANK1Q14678 1352 aa7.81□□□□□ -1.16
RUFY3-201ENST00000226328 NUP153P49790 1475 aaKnown RBP7.8□□□□□ -1.16
RUFY3-201ENST00000226328 TROQ12816 1431 aaPredicted RBP7.8□□□□□ -1.16
RUFY3-201ENST00000226328 ACIN1Q9UKV3 1341 aaKnown RBP7.8□□□□□ -1.16
RUFY3-201ENST00000226328 CASKIN1Q8WXD9 1431 aa7.8□□□□□ -1.16
RUFY3-201ENST00000226328 VPS8Q8N3P4 1428 aa7.8□□□□□ -1.16
RUFY3-201ENST00000226328 HECW1Q76N89 1606 aa7.79□□□□□ -1.16
RUFY3-201ENST00000226328 RAPGEF3O95398 923 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms