RNA–Protein interactions for RNA: ENST00000222573.4

ITGB8-201, Transcript of integrin subunit beta 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB8, Length 8,751 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-201ENST00000222573 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
ITGB8-201ENST00000222573 A0A0U1RQG5 324 aaPredicted RBP17.47■□□□□ 0.39
ITGB8-201ENST00000222573 GOLGA6L4A6NEF3 574 aa17.47■□□□□ 0.39
ITGB8-201ENST00000222573 TPRNQ4KMQ1 711 aa17.45■□□□□ 0.38
ITGB8-201ENST00000222573 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.45■□□□□ 0.38
ITGB8-201ENST00000222573 HSP90AA2PQ14568 343 aaPredicted RBP17.43■□□□□ 0.38
ITGB8-201ENST00000222573 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
ITGB8-201ENST00000222573 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
ITGB8-201ENST00000222573 FAM9BQ8IZU0 186 aa17.42■□□□□ 0.38
ITGB8-201ENST00000222573 TMC1Q8TDI8 760 aa17.41■□□□□ 0.38
ITGB8-201ENST00000222573 ARID3AQ99856 593 aa17.41■□□□□ 0.38
ITGB8-201ENST00000222573 LOC105371045A0A1W2PR82 267 aa17.39■□□□□ 0.37
ITGB8-201ENST00000222573 DEKP35659 375 aaKnown RBP17.37■□□□□ 0.37
ITGB8-201ENST00000222573 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
ITGB8-201ENST00000222573 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
ITGB8-201ENST00000222573 PRM3Q9NNZ6 103 aa17.35■□□□□ 0.37
ITGB8-201ENST00000222573 STK11IPQ8N1F8 1099 aa17.34■□□□□ 0.37
ITGB8-201ENST00000222573 SALL2Q9Y467 1007 aaPredicted RBP17.34■□□□□ 0.37
ITGB8-201ENST00000222573 LAS1LQ9Y4W2 734 aaKnown RBP17.33■□□□□ 0.37
ITGB8-201ENST00000222573 RRP12Q5JTH9 1297 aaKnown RBP17.31■□□□□ 0.36
ITGB8-201ENST00000222573 CLSTN1O94985 981 aa17.29■□□□□ 0.36
ITGB8-201ENST00000222573 RSPH6AQ9H0K4 717 aa17.28■□□□□ 0.36
ITGB8-201ENST00000222573 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.35
ITGB8-201ENST00000222573 GOLGA6L3A6NEY3 463 aa17.26■□□□□ 0.35
ITGB8-201ENST00000222573 FGD1P98174 961 aa17.25■□□□□ 0.35
ITGB8-201ENST00000222573 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
ITGB8-201ENST00000222573 NOM1Q5C9Z4 860 aaKnown RBP17.22■□□□□ 0.35
ITGB8-201ENST00000222573 HSCBQ8IWL3 235 aa17.2■□□□□ 0.34
ITGB8-201ENST00000222573 IRX6P78412 446 aaPredicted RBP17.19■□□□□ 0.34
ITGB8-201ENST00000222573 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
ITGB8-201ENST00000222573 ZNF771Q7L3S4 317 aaPredicted RBP17.19■□□□□ 0.34
ITGB8-201ENST00000222573 GPS2Q13227 327 aa17.19■□□□□ 0.34
ITGB8-201ENST00000222573 HTATSF1O43719 755 aaKnown RBP17.19■□□□□ 0.34
ITGB8-201ENST00000222573 SYAP1Q96A49 352 aaPredicted RBP17.17■□□□□ 0.34
ITGB8-201ENST00000222573 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
ITGB8-201ENST00000222573 TPM4P67936 248 aa17.16■□□□□ 0.34
ITGB8-201ENST00000222573 PATL2C9JE40 543 aaKnown RBP17.15■□□□□ 0.34
ITGB8-201ENST00000222573 MEX3CQ5U5Q3 659 aaKnown RBP17.15■□□□□ 0.34
ITGB8-201ENST00000222573 TEX35Q5T0J7 233 aa17.15■□□□□ 0.34
ITGB8-201ENST00000222573 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
ITGB8-201ENST00000222573 KCNJ4P48050 445 aa17.12■□□□□ 0.33
ITGB8-201ENST00000222573 DDX10Q13206 875 aaKnown RBP17.12■□□□□ 0.33
ITGB8-201ENST00000222573 TAF7LQ5H9L4 462 aa17.12■□□□□ 0.33
ITGB8-201ENST00000222573 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
ITGB8-201ENST00000222573 PODXL2Q9NZ53 605 aa17.11■□□□□ 0.33
ITGB8-201ENST00000222573 GBP4Q96PP9 640 aa17.11■□□□□ 0.33
ITGB8-201ENST00000222573 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
ITGB8-201ENST00000222573 HMMRO75330 724 aa17.1■□□□□ 0.33
ITGB8-201ENST00000222573 TAOK2Q9UL54 1235 aa17.1■□□□□ 0.33
ITGB8-201ENST00000222573 GNL2Q13823 731 aaKnown RBP17.08■□□□□ 0.33
ITGB8-201ENST00000222573 MCCP23508 829 aa17.08■□□□□ 0.33
ITGB8-201ENST00000222573 CFAP44Q96MT7 982 aa17.08■□□□□ 0.33
ITGB8-201ENST00000222573 MAP7D2Q96T17 732 aa17.07■□□□□ 0.32
ITGB8-201ENST00000222573 CHMP4BQ9H444 224 aaKnown RBP17.07■□□□□ 0.32
ITGB8-201ENST00000222573 CCDC70Q6NSX1 233 aa17.07■□□□□ 0.32
ITGB8-201ENST00000222573 CEP89Q96ST8 783 aa17.06■□□□□ 0.32
ITGB8-201ENST00000222573 CCDC34Q96HJ3 373 aa17.05■□□□□ 0.32
ITGB8-201ENST00000222573 PHF14O94880 888 aa17.05■□□□□ 0.32
ITGB8-201ENST00000222573 NEFHP12036 1026 aa17.04■□□□□ 0.32
ITGB8-201ENST00000222573 TPM3P06753 285 aa17.03■□□□□ 0.32
ITGB8-201ENST00000222573 CCDC191Q8NCU4 936 aa17.02■□□□□ 0.32
ITGB8-201ENST00000222573 HSP90B1P14625 803 aaKnown RBP17.02■□□□□ 0.32
ITGB8-201ENST00000222573 RDXP35241 583 aaKnown RBP17.02■□□□□ 0.32
ITGB8-201ENST00000222573 CALD1Q05682 793 aaKnown RBP17■□□□□ 0.31
ITGB8-201ENST00000222573 STAG3Q9UJ98 1225 aa16.98■□□□□ 0.31
ITGB8-201ENST00000222573 A0A0G2JS52 829 aa16.97■□□□□ 0.31
ITGB8-201ENST00000222573 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
ITGB8-201ENST00000222573 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
ITGB8-201ENST00000222573 CWC15Q9P013 229 aaKnown RBP16.97■□□□□ 0.31
ITGB8-201ENST00000222573 GZF1Q9H116 711 aaPredicted RBP16.96■□□□□ 0.3
ITGB8-201ENST00000222573 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
ITGB8-201ENST00000222573 PKNOX2Q96KN3 472 aa16.95■□□□□ 0.3
ITGB8-201ENST00000222573 PPP4R2Q9NY27 417 aa16.94■□□□□ 0.3
ITGB8-201ENST00000222573 RGS3P49796 1198 aa16.93■□□□□ 0.3
ITGB8-201ENST00000222573 PDE4CQ08493 712 aa16.93■□□□□ 0.3
ITGB8-201ENST00000222573 MS4A1P11836 297 aa16.92■□□□□ 0.3
ITGB8-201ENST00000222573 TSR1Q2NL82 804 aaKnown RBP16.91■□□□□ 0.3
ITGB8-201ENST00000222573 OS9Q13438 667 aaPredicted RBP16.91■□□□□ 0.3
ITGB8-201ENST00000222573 DYDC1Q8WWB3 177 aa16.89■□□□□ 0.29
ITGB8-201ENST00000222573 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
ITGB8-201ENST00000222573 CCDC66A2RUB6 948 aa16.89■□□□□ 0.29
ITGB8-201ENST00000222573 DCTN1Q14203 1278 aa16.89■□□□□ 0.29
ITGB8-201ENST00000222573 CDR1P51861 262 aa16.88■□□□□ 0.29
ITGB8-201ENST00000222573 CCAR2Q8N163 923 aaKnown RBP16.87■□□□□ 0.29
ITGB8-201ENST00000222573 AK7Q96M32 723 aa16.87■□□□□ 0.29
ITGB8-201ENST00000222573 MTERF4Q7Z6M4 381 aaKnown RBP16.87■□□□□ 0.29
ITGB8-201ENST00000222573 SPRYD3Q8NCJ5 442 aa16.87■□□□□ 0.29
ITGB8-201ENST00000222573 H0YHG0 523 aa16.87■□□□□ 0.29
ITGB8-201ENST00000222573 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
ITGB8-201ENST00000222573 NEXNQ0ZGT2 675 aa16.84■□□□□ 0.29
ITGB8-201ENST00000222573 RUFY1Q96T51 708 aa16.84■□□□□ 0.29
ITGB8-201ENST00000222573 KIAA1211Q6ZU35 1233 aa16.84■□□□□ 0.29
ITGB8-201ENST00000222573 ACBD3Q9H3P7 528 aa16.82■□□□□ 0.28
ITGB8-201ENST00000222573 NPHP1O15259 732 aa16.82■□□□□ 0.28
ITGB8-201ENST00000222573 TPM1P09493 284 aa16.81■□□□□ 0.28
ITGB8-201ENST00000222573 CHGAP10645 457 aaKnown RBP16.81■□□□□ 0.28
ITGB8-201ENST00000222573 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.81■□□□□ 0.28
ITGB8-201ENST00000222573 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
ITGB8-201ENST00000222573 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
ITGB8-201ENST00000222573 INCENPQ9NQS7 918 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms