RNA–Protein interactions for RNA: ENST00000222573.4

ITGB8-201, Transcript of integrin subunit beta 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB8, Length 8,751 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-201ENST00000222573 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
ITGB8-201ENST00000222573 MYT1Q01538 1121 aa22.15■■□□□ 1.14
ITGB8-201ENST00000222573 ERICH6Q7L0X2 663 aa21.79■■□□□ 1.08
ITGB8-201ENST00000222573 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
ITGB8-201ENST00000222573 YTHDC1Q96MU7 727 aaKnown RBP21.22■□□□□ 0.99
ITGB8-201ENST00000222573 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
ITGB8-201ENST00000222573 CENPBP07199 599 aaPredicted RBP20.97■□□□□ 0.95
ITGB8-201ENST00000222573 DCAF8L2P0C7V8 631 aa20.68■□□□□ 0.9
ITGB8-201ENST00000222573 NEFLP07196 543 aa20.6■□□□□ 0.89
ITGB8-201ENST00000222573 DAXXQ9UER7 740 aaPredicted RBP20.55■□□□□ 0.88
ITGB8-201ENST00000222573 APLP2Q06481 763 aa20.32■□□□□ 0.84
ITGB8-201ENST00000222573 ZEB1P37275 1124 aaPredicted RBP20.18■□□□□ 0.82
ITGB8-201ENST00000222573 RTL5Q5HYW3 569 aaPredicted RBP20.12■□□□□ 0.81
ITGB8-201ENST00000222573 SUPT5HO00267 1087 aaKnown RBP19.98■□□□□ 0.79
ITGB8-201ENST00000222573 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
ITGB8-201ENST00000222573 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
ITGB8-201ENST00000222573 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
ITGB8-201ENST00000222573 PCGF6Q9BYE7 350 aa19.89■□□□□ 0.77
ITGB8-201ENST00000222573 GLIPR1L2Q4G1C9 344 aa19.87■□□□□ 0.77
ITGB8-201ENST00000222573 EIF5BO60841 1220 aaKnown RBP19.49■□□□□ 0.71
ITGB8-201ENST00000222573 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
ITGB8-201ENST00000222573 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
ITGB8-201ENST00000222573 ANP32BQ92688 251 aaKnown RBP19.23■□□□□ 0.67
ITGB8-201ENST00000222573 CDK11AQ9UQ88 783 aaPredicted RBP19.05■□□□□ 0.64
ITGB8-201ENST00000222573 ATP1B4Q9UN42 357 aaPredicted RBP19.04■□□□□ 0.64
ITGB8-201ENST00000222573 TNNT2P45379 298 aaPredicted RBP19.01■□□□□ 0.63
ITGB8-201ENST00000222573 MYT1LQ9UL68 1186 aa18.99■□□□□ 0.63
ITGB8-201ENST00000222573 ZBTB47Q9UFB7 747 aaPredicted RBP18.99■□□□□ 0.63
ITGB8-201ENST00000222573 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
ITGB8-201ENST00000222573 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
ITGB8-201ENST00000222573 ANP32AP39687 249 aaKnown RBP18.93■□□□□ 0.62
ITGB8-201ENST00000222573 HRCP23327 699 aa18.88■□□□□ 0.61
ITGB8-201ENST00000222573 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
ITGB8-201ENST00000222573 SLC4A1APQ9BWU0 796 aaKnown RBP18.73■□□□□ 0.59
ITGB8-201ENST00000222573 TRIM26Q12899 539 aaPredicted RBP18.7■□□□□ 0.58
ITGB8-201ENST00000222573 HSP90AA1P07900 732 aaKnown RBP18.68■□□□□ 0.58
ITGB8-201ENST00000222573 DIEXFQ68CQ4 756 aaKnown RBP18.68■□□□□ 0.58
ITGB8-201ENST00000222573 UBTFP17480 764 aaKnown RBP18.67■□□□□ 0.58
ITGB8-201ENST00000222573 CNGB1Q14028 1251 aaPredicted RBP18.67■□□□□ 0.58
ITGB8-201ENST00000222573 GTF3C3Q9Y5Q9 886 aa18.63■□□□□ 0.57
ITGB8-201ENST00000222573 TRIM44Q96DX7 344 aaPredicted RBP18.62■□□□□ 0.57
ITGB8-201ENST00000222573 BCANQ96GW7 911 aa18.58■□□□□ 0.57
ITGB8-201ENST00000222573 TRIM41Q8WV44 630 aa18.54■□□□□ 0.56
ITGB8-201ENST00000222573 CANXP27824 592 aaKnown RBP18.53■□□□□ 0.56
ITGB8-201ENST00000222573 UPF2Q9HAU5 1272 aaKnown RBP18.51■□□□□ 0.55
ITGB8-201ENST00000222573 NCLP19338 710 aaKnown RBP18.5■□□□□ 0.55
ITGB8-201ENST00000222573 NPM2Q86SE8 214 aaKnown RBP18.45■□□□□ 0.54
ITGB8-201ENST00000222573 NEFMP07197 916 aa18.44■□□□□ 0.54
ITGB8-201ENST00000222573 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
ITGB8-201ENST00000222573 NBR1Q14596 966 aa18.38■□□□□ 0.53
ITGB8-201ENST00000222573 ANP32CO43423 234 aa18.33■□□□□ 0.53
ITGB8-201ENST00000222573 ARXQ96QS3 562 aa18.32■□□□□ 0.52
ITGB8-201ENST00000222573 ZNF326Q5BKZ1 582 aaKnown RBP18.31■□□□□ 0.52
ITGB8-201ENST00000222573 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
ITGB8-201ENST00000222573 ITGAEP38570 1179 aa18.3■□□□□ 0.52
ITGB8-201ENST00000222573 PPARGC1BQ86YN6 1023 aaKnown RBP18.28■□□□□ 0.52
ITGB8-201ENST00000222573 ANP32EQ9BTT0 268 aa18.28■□□□□ 0.52
ITGB8-201ENST00000222573 DNTTIP2Q5QJE6 756 aaKnown RBP18.21■□□□□ 0.51
ITGB8-201ENST00000222573 ERICH6BQ5W0A0 696 aa18.21■□□□□ 0.51
ITGB8-201ENST00000222573 AMER1Q5JTC6 1135 aaPredicted RBP18.19■□□□□ 0.5
ITGB8-201ENST00000222573 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
ITGB8-201ENST00000222573 NAP1L5Q96NT1 182 aaPredicted RBP18.15■□□□□ 0.5
ITGB8-201ENST00000222573 CALRP27797 417 aaKnown RBP18.13■□□□□ 0.49
ITGB8-201ENST00000222573 ACIN1Q9UKV3 1341 aaKnown RBP18.08■□□□□ 0.49
ITGB8-201ENST00000222573 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
ITGB8-201ENST00000222573 PTMAP06454 111 aaKnown RBP18.07■□□□□ 0.48
ITGB8-201ENST00000222573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
ITGB8-201ENST00000222573 GOLGA6L22H0YM25 854 aa18.04■□□□□ 0.48
ITGB8-201ENST00000222573 ZRSR1Q15695 479 aaKnown RBP18.01■□□□□ 0.47
ITGB8-201ENST00000222573 TNNT3P45378 269 aaPredicted RBP18.01■□□□□ 0.47
ITGB8-201ENST00000222573 BECN1Q14457 450 aa17.99■□□□□ 0.47
ITGB8-201ENST00000222573 CHAF1AQ13111 956 aaPredicted RBP17.98■□□□□ 0.47
ITGB8-201ENST00000222573 DDRGK1Q96HY6 314 aa17.96■□□□□ 0.47
ITGB8-201ENST00000222573 GOLGA6L6A8MZA4 724 aa17.92■□□□□ 0.46
ITGB8-201ENST00000222573 FKBP8Q14318 412 aa17.92■□□□□ 0.46
ITGB8-201ENST00000222573 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.91■□□□□ 0.46
ITGB8-201ENST00000222573 PTMSP20962 102 aa17.89■□□□□ 0.45
ITGB8-201ENST00000222573 NRDCO43847 1150 aa17.88■□□□□ 0.45
ITGB8-201ENST00000222573 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
ITGB8-201ENST00000222573 L1TD1Q5T7N2 865 aaKnown RBP17.82■□□□□ 0.44
ITGB8-201ENST00000222573 NEUROD1Q13562 356 aa17.81■□□□□ 0.44
ITGB8-201ENST00000222573 RTN4Q9NQC3 1192 aaKnown RBP17.81■□□□□ 0.44
ITGB8-201ENST00000222573 MSNP26038 577 aaKnown RBP17.76■□□□□ 0.43
ITGB8-201ENST00000222573 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
ITGB8-201ENST00000222573 MYH16Q9H6N6 1097 aa17.74■□□□□ 0.43
ITGB8-201ENST00000222573 SETQ01105 290 aaPredicted RBP17.71■□□□□ 0.43
ITGB8-201ENST00000222573 FAM50AQ14320 339 aaKnown RBP17.7■□□□□ 0.42
ITGB8-201ENST00000222573 PPM1GO15355 546 aaPredicted RBP17.68■□□□□ 0.42
ITGB8-201ENST00000222573 USP35Q9P2H5 1018 aa17.63■□□□□ 0.41
ITGB8-201ENST00000222573 GOLGA6L1Q8N7Z2 621 aa17.62■□□□□ 0.41
ITGB8-201ENST00000222573 NOC3LQ8WTT2 800 aaKnown RBP17.62■□□□□ 0.41
ITGB8-201ENST00000222573 PLCB2Q00722 1185 aa17.6■□□□□ 0.41
ITGB8-201ENST00000222573 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
ITGB8-201ENST00000222573 CASC1Q6TDU7 716 aa17.6■□□□□ 0.41
ITGB8-201ENST00000222573 TULP1O00294 542 aaPredicted RBP17.58■□□□□ 0.4
ITGB8-201ENST00000222573 KIAA2012Q0VF49 1180 aa17.55■□□□□ 0.4
ITGB8-201ENST00000222573 APPP05067 770 aa17.53■□□□□ 0.4
ITGB8-201ENST00000222573 ARID4BQ4LE39 1312 aaPredicted RBP17.51■□□□□ 0.39
ITGB8-201ENST00000222573 DRC7Q8IY82 874 aa17.51■□□□□ 0.39
ITGB8-201ENST00000222573 PNNQ9H307 717 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms