RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 CUX2O14529 1486 aa11.42□□□□□ -0.58
SCG3-201ENST00000220478 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
SCG3-201ENST00000220478 FOXD1Q16676 465 aa11.4□□□□□ -0.58
SCG3-201ENST00000220478 SYNJ1O43426 1573 aa11.39□□□□□ -0.59
SCG3-201ENST00000220478 SMARCA4P51532 1647 aa11.39□□□□□ -0.59
SCG3-201ENST00000220478 MAPKBP1O60336 1514 aa11.38□□□□□ -0.59
SCG3-201ENST00000220478 FKBP8Q14318 412 aa11.37□□□□□ -0.59
SCG3-201ENST00000220478 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
SCG3-201ENST00000220478 CEP164Q9UPV0 1460 aa11.37□□□□□ -0.59
SCG3-201ENST00000220478 UBTFP17480 764 aaKnown RBP11.36□□□□□ -0.59
SCG3-201ENST00000220478 BAZ1BQ9UIG0 1483 aaKnown RBP11.35□□□□□ -0.59
SCG3-201ENST00000220478 RAPGEF2Q9Y4G8 1499 aa11.34□□□□□ -0.59
SCG3-201ENST00000220478 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
SCG3-201ENST00000220478 RRBP1Q9P2E9 1410 aaKnown RBP11.33□□□□□ -0.6
SCG3-201ENST00000220478 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
SCG3-201ENST00000220478 ITGAEP38570 1179 aa11.3□□□□□ -0.6
SCG3-201ENST00000220478 WDR97A6NE52 1622 aa11.3□□□□□ -0.6
SCG3-201ENST00000220478 ARAP1Q96P48 1450 aa11.3□□□□□ -0.6
SCG3-201ENST00000220478 FANCIQ9NVI1 1328 aa11.3□□□□□ -0.6
SCG3-201ENST00000220478 UNC13AQ9UPW8 1703 aa11.27□□□□□ -0.61
SCG3-201ENST00000220478 PPP1R15AO75807 674 aaPredicted RBP11.27□□□□□ -0.61
SCG3-201ENST00000220478 FBLN2P98095 1184 aa11.25□□□□□ -0.61
SCG3-201ENST00000220478 KANK4Q5T7N3 995 aaPredicted RBP11.25□□□□□ -0.61
SCG3-201ENST00000220478 TRIM52Q96A61 297 aa11.17□□□□□ -0.62
SCG3-201ENST00000220478 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
SCG3-201ENST00000220478 ERICH3Q5RHP9 1530 aa11.17□□□□□ -0.62
SCG3-201ENST00000220478 DDX10Q13206 875 aaKnown RBP11.17□□□□□ -0.62
SCG3-201ENST00000220478 DEKP35659 375 aaKnown RBP11.16□□□□□ -0.62
SCG3-201ENST00000220478 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
SCG3-201ENST00000220478 PEG3Q9GZU2 1588 aa11.16□□□□□ -0.62
SCG3-201ENST00000220478 CCER2I3L3R5 266 aa11.15□□□□□ -0.62
SCG3-201ENST00000220478 PRXQ9BXM0 1461 aa11.15□□□□□ -0.62
SCG3-201ENST00000220478 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
SCG3-201ENST00000220478 CCNB3Q8WWL7 1395 aa11.13□□□□□ -0.63
SCG3-201ENST00000220478 BIVM-ERCC5R4GMW8 1640 aa11.13□□□□□ -0.63
SCG3-201ENST00000220478 NPM3O75607 178 aaKnown RBP11.12□□□□□ -0.63
SCG3-201ENST00000220478 KDM5BQ9UGL1 1544 aa11.1□□□□□ -0.63
SCG3-201ENST00000220478 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
SCG3-201ENST00000220478 NEFLP07196 543 aa11.08□□□□□ -0.64
SCG3-201ENST00000220478 SIN3AQ96ST3 1273 aa11.08□□□□□ -0.64
SCG3-201ENST00000220478 ARHGAP35Q9NRY4 1499 aa11.08□□□□□ -0.64
SCG3-201ENST00000220478 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
SCG3-201ENST00000220478 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
SCG3-201ENST00000220478 IRX6P78412 446 aaPredicted RBP11.07□□□□□ -0.64
SCG3-201ENST00000220478 HIRIP3Q9BW71 556 aaPredicted RBP11.06□□□□□ -0.64
SCG3-201ENST00000220478 TIAM1Q13009 1591 aa11.05□□□□□ -0.64
SCG3-201ENST00000220478 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
SCG3-201ENST00000220478 SETD5Q9C0A6 1442 aa11.04□□□□□ -0.64
SCG3-201ENST00000220478 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
SCG3-201ENST00000220478 MAP3K1Q13233 1512 aa11.02□□□□□ -0.65
SCG3-201ENST00000220478 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
SCG3-201ENST00000220478 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
SCG3-201ENST00000220478 PHLDB1Q86UU1 1377 aa11□□□□□ -0.65
SCG3-201ENST00000220478 BICRAQ9NZM4 1560 aa10.98□□□□□ -0.65
SCG3-201ENST00000220478 ANP32CO43423 234 aa10.98□□□□□ -0.65
SCG3-201ENST00000220478 IL27Q8NEV9 243 aa10.98□□□□□ -0.65
SCG3-201ENST00000220478 NOP58Q9Y2X3 529 aaKnown RBP10.97□□□□□ -0.65
SCG3-201ENST00000220478 ERICH6BQ5W0A0 696 aa10.97□□□□□ -0.65
SCG3-201ENST00000220478 PPP4R2Q9NY27 417 aa10.96□□□□□ -0.65
SCG3-201ENST00000220478 LRRC9Q6ZRR7 1453 aa10.96□□□□□ -0.65
SCG3-201ENST00000220478 CCDC184Q52MB2 194 aa10.96□□□□□ -0.66
SCG3-201ENST00000220478 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
SCG3-201ENST00000220478 NBR1Q14596 966 aa10.94□□□□□ -0.66
SCG3-201ENST00000220478 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
SCG3-201ENST00000220478 CCDC136Q96JN2 1154 aa10.94□□□□□ -0.66
SCG3-201ENST00000220478 B4GALNT3Q6L9W6 998 aa10.93□□□□□ -0.66
SCG3-201ENST00000220478 CUX1P39880 1505 aa10.93□□□□□ -0.66
SCG3-201ENST00000220478 WASHC2AQ641Q2 1341 aa10.93□□□□□ -0.66
SCG3-201ENST00000220478 PDIA4P13667 645 aaKnown RBP10.92□□□□□ -0.66
SCG3-201ENST00000220478 CHMP4AQ9BY43 222 aa10.91□□□□□ -0.66
SCG3-201ENST00000220478 FHAD1B1AJZ9 1412 aa10.9□□□□□ -0.66
SCG3-201ENST00000220478 POLR1AO95602 1720 aaPredicted RBP10.9□□□□□ -0.66
SCG3-201ENST00000220478 PCF11O94913 1555 aaKnown RBP10.9□□□□□ -0.66
SCG3-201ENST00000220478 ATAD2BQ9ULI0 1458 aa10.9□□□□□ -0.67
SCG3-201ENST00000220478 DENND4BO75064 1496 aaPredicted RBP10.89□□□□□ -0.67
SCG3-201ENST00000220478 AQRO60306 1485 aaKnown RBP eCLIP10.88□□□□□ -0.67
SCG3-201ENST00000220478 UBE2Q2Q8WVN8 375 aa10.87□□□□□ -0.67
SCG3-201ENST00000220478 PTPN23Q9H3S7 1636 aa10.87□□□□□ -0.67
SCG3-201ENST00000220478 PIAS4Q8N2W9 510 aaPredicted RBP10.87□□□□□ -0.67
SCG3-201ENST00000220478 PTPRKQ15262 1439 aa10.86□□□□□ -0.67
SCG3-201ENST00000220478 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
SCG3-201ENST00000220478 RNF123Q5XPI4 1314 aa10.86□□□□□ -0.67
SCG3-201ENST00000220478 IPO9Q96P70 1041 aaKnown RBP10.86□□□□□ -0.67
SCG3-201ENST00000220478 LRRIQ1Q96JM4 1722 aa10.86□□□□□ -0.67
SCG3-201ENST00000220478 AKNAQ7Z591 1439 aa10.84□□□□□ -0.67
SCG3-201ENST00000220478 CDK11BP21127 795 aaKnown RBP10.84□□□□□ -0.67
SCG3-201ENST00000220478 ZBED9Q6R2W3 1325 aa10.84□□□□□ -0.67
SCG3-201ENST00000220478 WASHC2CQ9Y4E1 1318 aa10.84□□□□□ -0.67
SCG3-201ENST00000220478 CNTLNQ9NXG0 1405 aa10.83□□□□□ -0.67
SCG3-201ENST00000220478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCG3-201ENST00000220478 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
SCG3-201ENST00000220478 CCDC18Q5T9S5 1454 aa10.82□□□□□ -0.68
SCG3-201ENST00000220478 C11orf95C9JLR9 678 aaPredicted RBP10.82□□□□□ -0.68
SCG3-201ENST00000220478 IGSF3O75054 1194 aa10.82□□□□□ -0.68
SCG3-201ENST00000220478 UACAQ9BZF9 1416 aa10.81□□□□□ -0.68
SCG3-201ENST00000220478 KIF27Q86VH2 1401 aa10.8□□□□□ -0.68
SCG3-201ENST00000220478 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
SCG3-201ENST00000220478 PAXIP1Q6ZW49 1069 aaPredicted RBP10.8□□□□□ -0.68
SCG3-201ENST00000220478 HFM1A2PYH4 1435 aa10.8□□□□□ -0.68
SCG3-201ENST00000220478 SMG6Q86US8 1419 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms