RNA–Protein interactions for RNA: ENST00000216832.8

PNN-201, Transcript of pinin, desmosome associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNN, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-201ENST00000216832 GRIN2BQ13224 1484 aa11.41□□□□□ -0.58
PNN-201ENST00000216832 ARHGEF11O15085 1522 aa11.41□□□□□ -0.58
PNN-201ENST00000216832 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
PNN-201ENST00000216832 YTHDC1Q96MU7 727 aaKnown RBP11.38□□□□□ -0.59
PNN-201ENST00000216832 ESF1Q9H501 851 aaKnown RBP11.38□□□□□ -0.59
PNN-201ENST00000216832 PRG4Q92954 1404 aaPredicted RBP11.37□□□□□ -0.59
PNN-201ENST00000216832 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
PNN-201ENST00000216832 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
PNN-201ENST00000216832 PTPRGP23470 1445 aa11.34□□□□□ -0.59
PNN-201ENST00000216832 CARMIL1Q5VZK9 1371 aa11.34□□□□□ -0.59
PNN-201ENST00000216832 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
PNN-201ENST00000216832 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
PNN-201ENST00000216832 MYT1Q01538 1121 aa11.33□□□□□ -0.6
PNN-201ENST00000216832 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
PNN-201ENST00000216832 SYNJ2O15056 1496 aa11.29□□□□□ -0.6
PNN-201ENST00000216832 CARMIL2Q6F5E8 1435 aa11.28□□□□□ -0.6
PNN-201ENST00000216832 CUX1P39880 1505 aa11.27□□□□□ -0.61
PNN-201ENST00000216832 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
PNN-201ENST00000216832 PLEKHD1A6NEE1 506 aa11.27□□□□□ -0.61
PNN-201ENST00000216832 APLP2Q06481 763 aa11.26□□□□□ -0.61
PNN-201ENST00000216832 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
PNN-201ENST00000216832 FHAD1B1AJZ9 1412 aa11.25□□□□□ -0.61
PNN-201ENST00000216832 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
PNN-201ENST00000216832 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
PNN-201ENST00000216832 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
PNN-201ENST00000216832 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
PNN-201ENST00000216832 MAGI1Q96QZ7 1491 aaPredicted RBP11.23□□□□□ -0.61
PNN-201ENST00000216832 IGF1RP08069 1367 aa11.2□□□□□ -0.62
PNN-201ENST00000216832 GRIN2AQ12879 1464 aa11.19□□□□□ -0.62
PNN-201ENST00000216832 CDK11AQ9UQ88 783 aaPredicted RBP11.19□□□□□ -0.62
PNN-201ENST00000216832 RAPGEF3O95398 923 aa11.18□□□□□ -0.62
PNN-201ENST00000216832 ZNF316A6NFI3 1004 aaPredicted RBP11.18□□□□□ -0.62
PNN-201ENST00000216832 BCANQ96GW7 911 aa11.12□□□□□ -0.63
PNN-201ENST00000216832 TNIKQ9UKE5 1360 aa11.12□□□□□ -0.63
PNN-201ENST00000216832 ABCA10Q8WWZ4 1543 aa11.11□□□□□ -0.63
PNN-201ENST00000216832 CHD1O14646 1710 aa11.1□□□□□ -0.63
PNN-201ENST00000216832 HSPA2P54652 639 aa11.1□□□□□ -0.63
PNN-201ENST00000216832 ITGAEP38570 1179 aa11.08□□□□□ -0.64
PNN-201ENST00000216832 MIER1Q8N108 512 aa11.07□□□□□ -0.64
PNN-201ENST00000216832 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
PNN-201ENST00000216832 GGT6Q6P531 493 aa11.06□□□□□ -0.64
PNN-201ENST00000216832 ERCC6L2Q5T890 1561 aa11.05□□□□□ -0.64
PNN-201ENST00000216832 TARBP1Q13395 1621 aaKnown RBP11.04□□□□□ -0.64
PNN-201ENST00000216832 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.65
PNN-201ENST00000216832 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
PNN-201ENST00000216832 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
PNN-201ENST00000216832 ASXL2Q76L83 1435 aa11.01□□□□□ -0.65
PNN-201ENST00000216832 KIAA0586Q9BVV6 1533 aa11.01□□□□□ -0.65
PNN-201ENST00000216832 CD109Q6YHK3 1445 aa11□□□□□ -0.65
PNN-201ENST00000216832 UACAQ9BZF9 1416 aa11□□□□□ -0.65
PNN-201ENST00000216832 CEP170Q5SW79 1584 aa11□□□□□ -0.65
PNN-201ENST00000216832 KDM4FA0A1W2PPD8 638 aa11□□□□□ -0.65
PNN-201ENST00000216832 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
PNN-201ENST00000216832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.659e-12■■□□□ 13.8
PNN-201ENST00000216832 EFCAB2Q5VUJ9 269 aa10.99□□□□□ -0.65
PNN-201ENST00000216832 CEP162Q5TB80 1403 aa10.99□□□□□ -0.65
PNN-201ENST00000216832 AFAP1Q8N556 730 aa10.97□□□□□ -0.65
PNN-201ENST00000216832 NUP160Q12769 1436 aa10.96□□□□□ -0.65
PNN-201ENST00000216832 TSPOAP1O95153 1857 aa10.96□□□□□ -0.66
PNN-201ENST00000216832 FHOD3Q2V2M9 1422 aa10.95□□□□□ -0.66
PNN-201ENST00000216832 PLB1Q6P1J6 1458 aa10.95□□□□□ -0.66
PNN-201ENST00000216832 CFDP1Q9UEE9 299 aaPredicted RBP10.95□□□□□ -0.66
PNN-201ENST00000216832 CHGAP10645 457 aaKnown RBP10.95□□□□□ -0.66
PNN-201ENST00000216832 TOP2BQ02880 1626 aa10.93□□□□□ -0.66
PNN-201ENST00000216832 FAM50AQ14320 339 aaKnown RBP10.92□□□□□ -0.66
PNN-201ENST00000216832 PIP4K2BP78356 416 aa10.92□□□□□ -0.66
PNN-201ENST00000216832 ERICH3Q5RHP9 1530 aa10.92□□□□□ -0.66
PNN-201ENST00000216832 HNRNPMP52272 730 aaKnown RBP eCLIP10.91□□□□□ -0.66
PNN-201ENST00000216832 TSPY4P0CV99 314 aa10.9□□□□□ -0.66
PNN-201ENST00000216832 TSPY10P0CW01 314 aa10.9□□□□□ -0.66
PNN-201ENST00000216832 CHIC2Q9UKJ5 165 aa10.89□□□□□ -0.67
PNN-201ENST00000216832 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
PNN-201ENST00000216832 MTUS2Q5JR59 1369 aa10.88□□□□□ -0.67
PNN-201ENST00000216832 ADAMTS12P58397 1594 aa10.88□□□□□ -0.67
PNN-201ENST00000216832 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
PNN-201ENST00000216832 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
PNN-201ENST00000216832 ABCC10Q5T3U5 1492 aa10.87□□□□□ -0.67
PNN-201ENST00000216832 PRDM2Q13029 1718 aa10.86□□□□□ -0.67
PNN-201ENST00000216832 CLASP1Q7Z460 1538 aa10.85□□□□□ -0.67
PNN-201ENST00000216832 PBRM1Q86U86 1689 aa10.84□□□□□ -0.67
PNN-201ENST00000216832 KIF3BO15066 747 aa10.84□□□□□ -0.67
PNN-201ENST00000216832 KDM6BO15054 1643 aa10.83□□□□□ -0.67
PNN-201ENST00000216832 ABCC2Q92887 1545 aa10.83□□□□□ -0.68
PNN-201ENST00000216832 PHF23Q9BUL5 403 aaPredicted RBP10.82□□□□□ -0.68
PNN-201ENST00000216832 IQGAP2Q13576 1575 aa10.82□□□□□ -0.68
PNN-201ENST00000216832 SPAG9O60271 1321 aaKnown RBP10.82□□□□□ -0.68
PNN-201ENST00000216832 TEX14Q8IWB6 1497 aa10.81□□□□□ -0.68
PNN-201ENST00000216832 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
PNN-201ENST00000216832 SUPT16HQ9Y5B9 1047 aaKnown RBP10.8□□□□□ -0.68
PNN-201ENST00000216832 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
PNN-201ENST00000216832 SCAPERQ9BY12 1400 aa10.79□□□□□ -0.68
PNN-201ENST00000216832 PPP1R15AO75807 674 aaPredicted RBP10.79□□□□□ -0.68
PNN-201ENST00000216832 EEA1Q15075 1411 aa10.79□□□□□ -0.68
PNN-201ENST00000216832 NEFLP07196 543 aa10.78□□□□□ -0.68
PNN-201ENST00000216832 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
PNN-201ENST00000216832 CLIP1P30622 1438 aa10.78□□□□□ -0.68
PNN-201ENST00000216832 CLSPNQ9HAW4 1339 aa10.78□□□□□ -0.68
PNN-201ENST00000216832 POGZQ7Z3K3 1410 aa10.77□□□□□ -0.69
PNN-201ENST00000216832 WDR7Q9Y4E6 1490 aa10.77□□□□□ -0.69
PNN-201ENST00000216832 DISP3Q9P2K9 1392 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms