RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 GOLGA3Q08378 1498 aa11.89□□□□□ -0.51
SUPT16H-201ENST00000216297 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
SUPT16H-201ENST00000216297 POLR3GLQ9BT43 218 aa11.88□□□□□ -0.51
SUPT16H-201ENST00000216297 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
SUPT16H-201ENST00000216297 PKNOX2Q96KN3 472 aa11.86□□□□□ -0.51
SUPT16H-201ENST00000216297 SENP3-EIF4A1A0A087X0R7 540 aa11.85□□□□□ -0.51
SUPT16H-201ENST00000216297 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
SUPT16H-201ENST00000216297 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
SUPT16H-201ENST00000216297 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
SUPT16H-201ENST00000216297 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
SUPT16H-201ENST00000216297 PPP1R15AO75807 674 aaPredicted RBP11.81□□□□□ -0.52
SUPT16H-201ENST00000216297 TONSLQ96HA7 1378 aa11.8□□□□□ -0.52
SUPT16H-201ENST00000216297 EEA1Q15075 1411 aa11.8□□□□□ -0.52
SUPT16H-201ENST00000216297 VPS8Q8N3P4 1428 aa11.8□□□□□ -0.52
SUPT16H-201ENST00000216297 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
SUPT16H-201ENST00000216297 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
SUPT16H-201ENST00000216297 RUSC2Q8N2Y8 1516 aa11.78□□□□□ -0.52
SUPT16H-201ENST00000216297 ARXQ96QS3 562 aa11.78□□□□□ -0.52
SUPT16H-201ENST00000216297 CECR2Q9BXF3 1484 aa11.77□□□□□ -0.53
SUPT16H-201ENST00000216297 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-201ENST00000216297 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
SUPT16H-201ENST00000216297 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
SUPT16H-201ENST00000216297 GSE1Q14687 1217 aa11.74□□□□□ -0.53
SUPT16H-201ENST00000216297 RAB3GAP2Q9H2M9 1393 aa11.73□□□□□ -0.53
SUPT16H-201ENST00000216297 NAP1L5Q96NT1 182 aaPredicted RBP11.72□□□□□ -0.53
SUPT16H-201ENST00000216297 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
SUPT16H-201ENST00000216297 CCNB3Q8WWL7 1395 aa11.71□□□□□ -0.53
SUPT16H-201ENST00000216297 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
SUPT16H-201ENST00000216297 MROH2BQ7Z745 1585 aa11.69□□□□□ -0.54
SUPT16H-201ENST00000216297 SLC4A3P48751 1232 aa11.66□□□□□ -0.54
SUPT16H-201ENST00000216297 FRAT1Q92837 279 aaPredicted RBP11.65□□□□□ -0.54
SUPT16H-201ENST00000216297 PDE4AP27815 886 aa11.63□□□□□ -0.55
SUPT16H-201ENST00000216297 ARID4BQ4LE39 1312 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-201ENST00000216297 EIF4G2P78344 907 aaKnown RBP eCLIP11.63□□□□□ -0.55
SUPT16H-201ENST00000216297 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
SUPT16H-201ENST00000216297 HSP90AA2PQ14568 343 aaPredicted RBP11.62□□□□□ -0.55
SUPT16H-201ENST00000216297 SETD5Q9C0A6 1442 aa11.62□□□□□ -0.55
SUPT16H-201ENST00000216297 WIZO95785 1651 aa11.62□□□□□ -0.55
SUPT16H-201ENST00000216297 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-201ENST00000216297 NFKBIBQ15653 356 aa11.61□□□□□ -0.55
SUPT16H-201ENST00000216297 CCDC184Q52MB2 194 aa11.61□□□□□ -0.55
SUPT16H-201ENST00000216297 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
SUPT16H-201ENST00000216297 HSP90AA1P07900 732 aaKnown RBP11.6□□□□□ -0.55
SUPT16H-201ENST00000216297 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
SUPT16H-201ENST00000216297 ZMYND15Q9H091 742 aa11.6□□□□□ -0.55
SUPT16H-201ENST00000216297 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
SUPT16H-201ENST00000216297 HSPA5P11021 654 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-201ENST00000216297 TMC1Q8TDI8 760 aa11.59□□□□□ -0.55
SUPT16H-201ENST00000216297 P3H3Q8IVL6 736 aa11.58□□□□□ -0.56
SUPT16H-201ENST00000216297 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-201ENST00000216297 NUDCQ9Y266 331 aa11.58□□□□□ -0.56
SUPT16H-201ENST00000216297 PNNQ9H307 717 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-201ENST00000216297 ZNF326Q5BKZ1 582 aaKnown RBP11.56□□□□□ -0.56
SUPT16H-201ENST00000216297 NACADO15069 1562 aa11.56□□□□□ -0.56
SUPT16H-201ENST00000216297 FAM43AQ8N2R8 423 aa11.55□□□□□ -0.56
SUPT16H-201ENST00000216297 RAPGEF2Q9Y4G8 1499 aa11.55□□□□□ -0.56
SUPT16H-201ENST00000216297 AKNAQ7Z591 1439 aa11.55□□□□□ -0.56
SUPT16H-201ENST00000216297 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
SUPT16H-201ENST00000216297 WASHC2CQ9Y4E1 1318 aa11.53□□□□□ -0.56
SUPT16H-201ENST00000216297 EXOC6Q8TAG9 804 aa11.53□□□□□ -0.56
SUPT16H-201ENST00000216297 A0A0U1RQG5 324 aaPredicted RBP11.52□□□□□ -0.57
SUPT16H-201ENST00000216297 FRAT2O75474 233 aaPredicted RBP11.51□□□□□ -0.57
SUPT16H-201ENST00000216297 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
SUPT16H-201ENST00000216297 KIF21BO75037 1637 aa11.5□□□□□ -0.57
SUPT16H-201ENST00000216297 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
SUPT16H-201ENST00000216297 RGS3P49796 1198 aa11.49□□□□□ -0.57
SUPT16H-201ENST00000216297 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
SUPT16H-201ENST00000216297 RRBP1Q9P2E9 1410 aaKnown RBP11.47□□□□□ -0.57
SUPT16H-201ENST00000216297 SLKQ9H2G2 1235 aaPredicted RBP11.46□□□□□ -0.57
SUPT16H-201ENST00000216297 GZF1Q9H116 711 aaPredicted RBP11.46□□□□□ -0.57
SUPT16H-201ENST00000216297 RCAN3Q9UKA8 241 aa11.46□□□□□ -0.58
SUPT16H-201ENST00000216297 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.58
SUPT16H-201ENST00000216297 MS4A1P11836 297 aa11.45□□□□□ -0.58
SUPT16H-201ENST00000216297 TRIM44Q96DX7 344 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-201ENST00000216297 SKAP1Q86WV1 359 aa11.44□□□□□ -0.58
SUPT16H-201ENST00000216297 RRP1P56182 461 aaKnown RBP11.43□□□□□ -0.58
SUPT16H-201ENST00000216297 BECN1Q14457 450 aa11.42□□□□□ -0.58
SUPT16H-201ENST00000216297 RRP7BPQ9NSQ0 103 aa11.42□□□□□ -0.58
SUPT16H-201ENST00000216297 PLIN1O60240 522 aa11.42□□□□□ -0.58
SUPT16H-201ENST00000216297 MAPKBP1O60336 1514 aa11.42□□□□□ -0.58
SUPT16H-201ENST00000216297 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
SUPT16H-201ENST00000216297 ARID3AQ99856 593 aa11.41□□□□□ -0.58
SUPT16H-201ENST00000216297 RRP9O43818 475 aaKnown RBP11.4□□□□□ -0.58
SUPT16H-201ENST00000216297 GOLGA6L3A6NEY3 463 aa11.4□□□□□ -0.58
SUPT16H-201ENST00000216297 DCAF11Q8TEB1 546 aa11.4□□□□□ -0.58
SUPT16H-201ENST00000216297 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
SUPT16H-201ENST00000216297 POGKQ9P215 609 aa11.38□□□□□ -0.59
SUPT16H-201ENST00000216297 SMG6Q86US8 1419 aaKnown RBP11.38□□□□□ -0.59
SUPT16H-201ENST00000216297 CNTLNQ9NXG0 1405 aa11.38□□□□□ -0.59
SUPT16H-201ENST00000216297 UPF2Q9HAU5 1272 aaKnown RBP11.38□□□□□ -0.59
SUPT16H-201ENST00000216297 RRAGDQ9NQL2 400 aaPredicted RBP11.36□□□□□ -0.59
SUPT16H-201ENST00000216297 FOXD1Q16676 465 aa11.35□□□□□ -0.59
SUPT16H-201ENST00000216297 ANP32BQ92688 251 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-201ENST00000216297 FAM161AQ3B820 660 aa11.35□□□□□ -0.59
SUPT16H-201ENST00000216297 L3MBTL2Q969R5 705 aa11.35□□□□□ -0.59
SUPT16H-201ENST00000216297 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
SUPT16H-201ENST00000216297 TOP2AP11388 1531 aaKnown RBP11.34□□□□□ -0.59
SUPT16H-201ENST00000216297 ARAP1Q96P48 1450 aa11.33□□□□□ -0.59
SUPT16H-201ENST00000216297 CCDC7Q96M83 1385 aa11.33□□□□□ -0.59
SUPT16H-201ENST00000216297 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms