RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Cux2P70298 1426 aa18.47■□□□□ 0.55
Pdgfra-205ENSMUST00000201711 Cc2d2aQ8CFW7 1633 aa18.46■□□□□ 0.55
Pdgfra-205ENSMUST00000201711 Hspa5P20029 655 aaKnown RBP18.44■□□□□ 0.54
Pdgfra-205ENSMUST00000201711 Erich6D3Z6S9 713 aa18.44■□□□□ 0.54
Pdgfra-205ENSMUST00000201711 Ccer2J3QPU5 274 aa18.43■□□□□ 0.54
Pdgfra-205ENSMUST00000201711 Arhgap27A2AB59 869 aa18.42■□□□□ 0.54
Pdgfra-205ENSMUST00000201711 Baz1bQ9Z277 1479 aa18.41■□□□□ 0.54
Pdgfra-205ENSMUST00000201711 Prdm10Q3UTQ7 1184 aa18.39■□□□□ 0.53
Pdgfra-205ENSMUST00000201711 Aebp1Q640N1 1128 aa18.38■□□□□ 0.53
Pdgfra-205ENSMUST00000201711 Anp32bQ9EST5 272 aaKnown RBP18.35■□□□□ 0.53
Pdgfra-205ENSMUST00000201711 Rgl3Q3UYI5 709 aa18.33■□□□□ 0.52
Pdgfra-205ENSMUST00000201711 Plppr3Q7TPB0 716 aa18.29■□□□□ 0.52
Pdgfra-205ENSMUST00000201711 Phldb1Q6PDH0 1371 aaKnown RBP18.29■□□□□ 0.52
Pdgfra-205ENSMUST00000201711 Mrs2Q5NCE8 434 aa18.29■□□□□ 0.52
Pdgfra-205ENSMUST00000201711 Sin3aQ60520 1274 aaKnown RBP18.26■□□□□ 0.51
Pdgfra-205ENSMUST00000201711 Top2aQ01320 1528 aaKnown RBP18.25■□□□□ 0.51
Pdgfra-205ENSMUST00000201711 Grwd1Q810D6 446 aaKnown RBP18.23■□□□□ 0.51
Pdgfra-205ENSMUST00000201711 PtprkP35822 1457 aa18.23■□□□□ 0.51
Pdgfra-205ENSMUST00000201711 LrpprcQ6PB66 1392 aaKnown RBP18.23■□□□□ 0.51
Pdgfra-205ENSMUST00000201711 Kif27Q7M6Z4 1394 aa18.21■□□□□ 0.51
Pdgfra-205ENSMUST00000201711 Ttbk1Q6PCN3 1308 aa18.2■□□□□ 0.5
Pdgfra-205ENSMUST00000201711 Rpap1Q80TE0 1409 aa18.19■□□□□ 0.5
Pdgfra-205ENSMUST00000201711 Cabp1Q9JLK7 227 aa18.18■□□□□ 0.5
Pdgfra-205ENSMUST00000201711 Top2bQ64511 1612 aa18.15■□□□□ 0.5
Pdgfra-205ENSMUST00000201711 P3h3Q8CG70 732 aa18.15■□□□□ 0.5
Pdgfra-205ENSMUST00000201711 Carmil1Q6EDY6 1374 aa18.14■□□□□ 0.5
Pdgfra-205ENSMUST00000201711 Dhx29Q6PGC1 1365 aaKnown RBP18.14■□□□□ 0.5
Pdgfra-205ENSMUST00000201711 Arhgap35Q91YM2 1499 aa18.14■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 Frmpd1A2AKB4 1549 aa18.14■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 SafbD3YXK2 937 aaKnown RBP18.12■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 Anp32aO35381 247 aa18.12■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 CntlnA2AM05 1397 aa18.12■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 NeflP08551 543 aa18.11■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 Mia2Q91ZV0 1396 aa18.1■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 DiexfQ8BTT6 772 aaKnown RBP18.1■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 Fyco1Q8VDC1 1437 aa18.09■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 Calr4Q3TQS0 420 aa18.08■□□□□ 0.49
Pdgfra-205ENSMUST00000201711 Mtus2Q3UHD3 1353 aa18.08■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Pkd2O35245 966 aa18.08■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Atp1b4Q99ME6 356 aa18.08■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Rtl5Q5DTT4 599 aa18.07■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Rrp7aQ9D1C9 280 aaKnown RBP18.07■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Rad21Q61550 635 aaKnown RBP18.07■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Shroom4Q1W617 1475 aa18.06■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Arap1Q4LDD4 1452 aa18.06■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Wwc2Q6NXJ0 1187 aa18.04■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Ccnb3Q810T2 1396 aa18.03■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Rad54l2Q99NG0 1466 aa18.03■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Mphosph9A6H5Y1 991 aa18.03■□□□□ 0.48
Pdgfra-205ENSMUST00000201711 Gm13697A2AK42 830 aa18■□□□□ 0.47
Pdgfra-205ENSMUST00000201711 Dnajc5bQ9CQ94 199 aa18■□□□□ 0.47
Pdgfra-205ENSMUST00000201711 Kdm2aP59997 1161 aa18■□□□□ 0.47
Pdgfra-205ENSMUST00000201711 Ppp4r2Q0VGB7 417 aa17.99■□□□□ 0.47
Pdgfra-205ENSMUST00000201711 Trak1Q6PD31 939 aa17.99■□□□□ 0.47
Pdgfra-205ENSMUST00000201711 Card11Q8CIS0 1159 aa17.97■□□□□ 0.47
Pdgfra-205ENSMUST00000201711 Fam71e1A1L3C1 212 aa17.96■□□□□ 0.47
Pdgfra-205ENSMUST00000201711 Naip1Q9QWK5 1403 aa17.96■□□□□ 0.47
Pdgfra-205ENSMUST00000201711 AknaQ80VW7 1404 aa17.95■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 Nlrp6Q91WS2 869 aa17.94■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 Clstn2Q9ER65 966 aa17.93■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 Efcab5A0JP43 1406 aa17.92■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 Duox2A2AQ99 1517 aa17.92■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 Grin2bQ01097 1482 aa17.92■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 Map4P27546 1125 aaKnown RBP17.91■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 WrnO09053 1401 aa17.9■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 NrkQ9R0G8 1455 aa17.9■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 Polr3glQ8R0C0 218 aa17.9■□□□□ 0.46
Pdgfra-205ENSMUST00000201711 Ncapd3Q6ZQK0 1506 aa17.88■□□□□ 0.45
Pdgfra-205ENSMUST00000201711 Wdr62Q3U3T8 1523 aa17.88■□□□□ 0.45
Pdgfra-205ENSMUST00000201711 Arid3cA6PWV5 409 aa17.88■□□□□ 0.45
Pdgfra-205ENSMUST00000201711 Rangap1P46061 589 aaKnown RBP17.88■□□□□ 0.45
Pdgfra-205ENSMUST00000201711 Zfp644E9QA22 1323 aa17.88■□□□□ 0.45
Pdgfra-205ENSMUST00000201711 Mroh3A0A1D5RM54 893 aa17.88■□□□□ 0.45
Pdgfra-205ENSMUST00000201711 Mroh2bQ7M6Y6 1581 aa17.87■□□□□ 0.45
Pdgfra-205ENSMUST00000201711 Rundc1Q0VDN7 615 aa17.86■□□□□ 0.45
Pdgfra-205ENSMUST00000201711 Ofd1Q80Z25 1017 aa17.84■□□□□ 0.45
Pdgfra-205ENSMUST00000201711 Exoc6Q8R313 802 aa17.82■□□□□ 0.44
Pdgfra-205ENSMUST00000201711 Arhgef5E9Q7D5 1581 aa17.82■□□□□ 0.44
Pdgfra-205ENSMUST00000201711 Wdr43Q6ZQL4 677 aaKnown RBP17.81■□□□□ 0.44
Pdgfra-205ENSMUST00000201711 PogzQ8BZH4 1409 aaKnown RBP17.81■□□□□ 0.44
Pdgfra-205ENSMUST00000201711 Camsap1A2AHC3 1581 aa17.81■□□□□ 0.44
Pdgfra-205ENSMUST00000201711 AqrQ8CFQ3 1481 aaKnown RBP17.81■□□□□ 0.44
Pdgfra-205ENSMUST00000201711 Stk24Q99KH8 431 aa17.8■□□□□ 0.44
Pdgfra-205ENSMUST00000201711 Usp47Q8BY87 1376 aa17.75■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Gm13695A2AK44 830 aa17.75■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Cwc22Q8C5N3 908 aaKnown RBP17.74■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Plekhh2Q8C115 1491 aa17.74■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Ifit1bl1D3Z6F0 470 aa17.74■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Map3k1P53349 1493 aa17.74■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 ArxO35085 564 aa17.73■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Tdrd9Q14BI7 1383 aa17.73■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Slc4a3P16283 1227 aa17.72■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Urb2E9Q7L1 1524 aaKnown RBP17.71■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Sart1Q9Z315 806 aaKnown RBP17.71■□□□□ 0.43
Pdgfra-205ENSMUST00000201711 Gm20521D3Z5F7 333 aa17.7■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Lamc3Q9R0B6 1581 aa17.7■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Apbb1Q9QXJ1 710 aa17.7■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Tiam1Q60610 1591 aa17.69■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Cnga1P29974 684 aa17.69■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Fhad1A6PWD2 1420 aa17.68■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms