RNA–Protein interactions for RNA: ENSMUST00000197407.4

Nub1-202, Transcript of NEDD8 ultimate buster 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nub1, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1-202ENSMUST00000197407 Lmod2Q3UHZ5 550 aa17.47■□□□□ 0.39
Nub1-202ENSMUST00000197407 Plcd4Q8K3R3 807 aa17.47■□□□□ 0.39
Nub1-202ENSMUST00000197407 4933416C03RikQ3V063 378 aa17.45■□□□□ 0.38
Nub1-202ENSMUST00000197407 Eif5bQ05D44 1216 aaKnown RBP17.43■□□□□ 0.38
Nub1-202ENSMUST00000197407 BicraF8VPZ9 1578 aa17.4■□□□□ 0.38
Nub1-202ENSMUST00000197407 Npm1Q61937 292 aaKnown RBP17.35■□□□□ 0.37
Nub1-202ENSMUST00000197407 Washc2Q6PGL7 1334 aa17.33■□□□□ 0.37
Nub1-202ENSMUST00000197407 Pak3Q61036 559 aa17.33■□□□□ 0.36
Nub1-202ENSMUST00000197407 Rpap1Q80TE0 1409 aa17.3■□□□□ 0.36
Nub1-202ENSMUST00000197407 DaxxO35613 739 aa17.29■□□□□ 0.36
Nub1-202ENSMUST00000197407 Kif15Q6P9L6 1387 aa17.29■□□□□ 0.36
Nub1-202ENSMUST00000197407 Cep162Q6ZQ06 1403 aa17.28■□□□□ 0.36
Nub1-202ENSMUST00000197407 Ipo9Q91YE6 1041 aa17.27■□□□□ 0.36
Nub1-202ENSMUST00000197407 Ubl4bQ9CQ84 188 aa17.26■□□□□ 0.35
Nub1-202ENSMUST00000197407 Rapgef2Q8CHG7 1496 aa17.25■□□□□ 0.35
Nub1-202ENSMUST00000197407 Ipo4Q8VI75 1082 aa17.25■□□□□ 0.35
Nub1-202ENSMUST00000197407 Ncapd3Q6ZQK0 1506 aa17.24■□□□□ 0.35
Nub1-202ENSMUST00000197407 Fmn1Q05860 1466 aa17.23■□□□□ 0.35
Nub1-202ENSMUST00000197407 Smarca4Q3TKT4 1613 aaKnown RBP17.23■□□□□ 0.35
Nub1-202ENSMUST00000197407 Cttnbp2B9EJA2 1648 aa17.18■□□□□ 0.34
Nub1-202ENSMUST00000197407 Liat1Q810M6 228 aa17.17■□□□□ 0.34
Nub1-202ENSMUST00000197407 Setd5Q5XJV7 1441 aa17.17■□□□□ 0.34
Nub1-202ENSMUST00000197407 Gm13697A2AK42 830 aa17.16■□□□□ 0.34
Nub1-202ENSMUST00000197407 Cc2d2aQ8CFW7 1633 aa17.14■□□□□ 0.33
Nub1-202ENSMUST00000197407 Ccer2J3QPU5 274 aa17.12■□□□□ 0.33
Nub1-202ENSMUST00000197407 P3h3Q8CG70 732 aa17.1■□□□□ 0.33
Nub1-202ENSMUST00000197407 BlmO88700 1416 aa17.09■□□□□ 0.33
Nub1-202ENSMUST00000197407 Egfem1Q8C088 590 aa17.09■□□□□ 0.33
Nub1-202ENSMUST00000197407 Slc4a3P16283 1227 aa17.09■□□□□ 0.33
Nub1-202ENSMUST00000197407 Pds5bQ4VA53 1446 aaKnown RBP17.08■□□□□ 0.32
Nub1-202ENSMUST00000197407 Smg6P61406 1418 aaKnown RBP17.08■□□□□ 0.32
Nub1-202ENSMUST00000197407 Tcerg1Q8CGF7 1100 aaKnown RBP17.08■□□□□ 0.32
Nub1-202ENSMUST00000197407 Atad2bE9Q166 1460 aaKnown RBP17.07■□□□□ 0.32
Nub1-202ENSMUST00000197407 Iqgap2Q3UQ44 1575 aa17.07■□□□□ 0.32
Nub1-202ENSMUST00000197407 Mrs2Q5NCE8 434 aa17.04■□□□□ 0.32
Nub1-202ENSMUST00000197407 NeflP08551 543 aa17.04■□□□□ 0.32
Nub1-202ENSMUST00000197407 Eea1Q8BL66 1411 aa17.02■□□□□ 0.32
Nub1-202ENSMUST00000197407 Iqcf3Q9D498 203 aa17.02■□□□□ 0.31
Nub1-202ENSMUST00000197407 Baz1bQ9Z277 1479 aa16.99■□□□□ 0.31
Nub1-202ENSMUST00000197407 Chic2Q9D9G3 165 aa16.98■□□□□ 0.31
Nub1-202ENSMUST00000197407 Top2bQ64511 1612 aa16.98■□□□□ 0.31
Nub1-202ENSMUST00000197407 Ercc6F8VPZ5 1481 aa16.96■□□□□ 0.31
Nub1-202ENSMUST00000197407 Sin3aQ60520 1274 aaKnown RBP16.96■□□□□ 0.31
Nub1-202ENSMUST00000197407 Pdcl3Q8BVF2 240 aa16.96■□□□□ 0.31
Nub1-202ENSMUST00000197407 Top2aQ01320 1528 aaKnown RBP16.93■□□□□ 0.3
Nub1-202ENSMUST00000197407 UacaQ8CGB3 1411 aa16.9■□□□□ 0.3
Nub1-202ENSMUST00000197407 Hspa5P20029 655 aaKnown RBP16.9■□□□□ 0.3
Nub1-202ENSMUST00000197407 Ccdc18Q640L5 1455 aa16.9■□□□□ 0.3
Nub1-202ENSMUST00000197407 ChgaP26339 463 aaKnown RBP16.9■□□□□ 0.3
Nub1-202ENSMUST00000197407 PtprkP35822 1457 aa16.9■□□□□ 0.3
Nub1-202ENSMUST00000197407 AU015836B2RUM3 263 aa16.87■□□□□ 0.29
Nub1-202ENSMUST00000197407 Zbtb7cQ8VCZ7 619 aa16.85■□□□□ 0.29
Nub1-202ENSMUST00000197407 CanxP35564 591 aaKnown RBP16.85■□□□□ 0.29
Nub1-202ENSMUST00000197407 Rtn4Q99P72 1162 aaKnown RBP16.84■□□□□ 0.29
Nub1-202ENSMUST00000197407 Cux2P70298 1426 aa16.83■□□□□ 0.28
Nub1-202ENSMUST00000197407 Gtf2a1Q99PM3 378 aa16.82■□□□□ 0.28
Nub1-202ENSMUST00000197407 Kdm5bQ80Y84 1544 aa16.82■□□□□ 0.28
Nub1-202ENSMUST00000197407 Wwc2Q6NXJ0 1187 aa16.82■□□□□ 0.28
Nub1-202ENSMUST00000197407 Fkbp15Q6P9Q6 1216 aaKnown RBP16.81■□□□□ 0.28
Nub1-202ENSMUST00000197407 Ofd1Q80Z25 1017 aa16.81■□□□□ 0.28
Nub1-202ENSMUST00000197407 Taok2Q6ZQ29 1240 aa16.81■□□□□ 0.28
Nub1-202ENSMUST00000197407 Frmpd1A2AKB4 1549 aa16.8■□□□□ 0.28
Nub1-202ENSMUST00000197407 Arhgap27A2AB59 869 aa16.78■□□□□ 0.28
Nub1-202ENSMUST00000197407 Slc4a2P13808 1237 aaKnown RBP16.78■□□□□ 0.28
Nub1-202ENSMUST00000197407 Arhgap35Q91YM2 1499 aa16.77■□□□□ 0.28
Nub1-202ENSMUST00000197407 Anp32bQ9EST5 272 aaKnown RBP16.77■□□□□ 0.28
Nub1-202ENSMUST00000197407 Gm13695A2AK44 830 aa16.76■□□□□ 0.27
Nub1-202ENSMUST00000197407 AampJ3QN89 436 aa16.76■□□□□ 0.27
Nub1-202ENSMUST00000197407 Kcnn1Q9EQR3 537 aa16.75■□□□□ 0.27
Nub1-202ENSMUST00000197407 Exoc6Q8R313 802 aa16.74■□□□□ 0.27
Nub1-202ENSMUST00000197407 Rrp9Q91WM3 475 aaKnown RBP16.73■□□□□ 0.27
Nub1-202ENSMUST00000197407 Dnttip2Q8R2M2 758 aaKnown RBP16.73■□□□□ 0.27
Nub1-202ENSMUST00000197407 Aebp1Q640N1 1128 aa16.71■□□□□ 0.27
Nub1-202ENSMUST00000197407 Kcnh8P59111 1102 aa16.71■□□□□ 0.27
Nub1-202ENSMUST00000197407 Ankrd36D3Z4K0 1415 aa16.71■□□□□ 0.26
Nub1-202ENSMUST00000197407 Arap1Q4LDD4 1452 aa16.7■□□□□ 0.26
Nub1-202ENSMUST00000197407 DmtnQ9WV69 405 aa16.69■□□□□ 0.26
Nub1-202ENSMUST00000197407 Phldb1Q6PDH0 1371 aaKnown RBP16.68■□□□□ 0.26
Nub1-202ENSMUST00000197407 Zfp777B9EKF4 885 aa16.68■□□□□ 0.26
Nub1-202ENSMUST00000197407 Sart3Q9JLI8 962 aaKnown RBP16.68■□□□□ 0.26
Nub1-202ENSMUST00000197407 Zbtb4Q5F293 982 aa16.67■□□□□ 0.26
Nub1-202ENSMUST00000197407 Mre11Q61216 706 aa16.66■□□□□ 0.26
Nub1-202ENSMUST00000197407 Dnai1Q8C0M8 701 aa16.66■□□□□ 0.26
Nub1-202ENSMUST00000197407 Znf692Q3U381 531 aa16.65■□□□□ 0.26
Nub1-202ENSMUST00000197407 LrpprcQ6PB66 1392 aaKnown RBP16.64■□□□□ 0.25
Nub1-202ENSMUST00000197407 Mia2Q91ZV0 1396 aa16.64■□□□□ 0.25
Nub1-202ENSMUST00000197407 Ppm1gQ61074 542 aa16.63■□□□□ 0.25
Nub1-202ENSMUST00000197407 Shroom4Q1W617 1475 aa16.63■□□□□ 0.25
Nub1-202ENSMUST00000197407 Ncoa2Q61026 1462 aa16.63■□□□□ 0.25
Nub1-202ENSMUST00000197407 Fyco1Q8VDC1 1437 aa16.62■□□□□ 0.25
Nub1-202ENSMUST00000197407 PnisrA2AJT4 805 aaKnown RBP16.61■□□□□ 0.25
Nub1-202ENSMUST00000197407 TchhA0A0B4J1F9 1599 aa16.61■□□□□ 0.25
Nub1-202ENSMUST00000197407 L3mbtl2P59178 703 aa16.59■□□□□ 0.25
Nub1-202ENSMUST00000197407 Camsap2Q8C1B1 1461 aa16.59■□□□□ 0.25
Nub1-202ENSMUST00000197407 Arhgef5E9Q7D5 1581 aa16.58■□□□□ 0.24
Nub1-202ENSMUST00000197407 Wdr62Q3U3T8 1523 aa16.58■□□□□ 0.24
Nub1-202ENSMUST00000197407 CntlnA2AM05 1397 aa16.58■□□□□ 0.24
Nub1-202ENSMUST00000197407 Carmil1Q6EDY6 1374 aa16.55■□□□□ 0.24
Nub1-202ENSMUST00000197407 Dhx29Q6PGC1 1365 aaKnown RBP16.55■□□□□ 0.24
Nub1-202ENSMUST00000197407 Ttll13A4Q9F6 804 aa16.54■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms