RNA–Protein interactions for RNA: ENSMUST00000194774.5

Nphp3-207, Transcript of Nephrocystin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nphp3, Length 4,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3-207ENSMUST00000194774 Arid4bA2CG63 1314 aaKnown RBP10.93□□□□□ -0.66
Nphp3-207ENSMUST00000194774 Os9Q8K2C7 672 aa10.93□□□□□ -0.66
Nphp3-207ENSMUST00000194774 Atad2bE9Q166 1460 aaKnown RBP10.92□□□□□ -0.66
Nphp3-207ENSMUST00000194774 Anp32aO35381 247 aa10.91□□□□□ -0.66
Nphp3-207ENSMUST00000194774 Kif15Q6P9L6 1387 aa10.91□□□□□ -0.66
Nphp3-207ENSMUST00000194774 Rsf1E9PWW9 1441 aaKnown RBP10.91□□□□□ -0.66
Nphp3-207ENSMUST00000194774 NeflP08551 543 aa10.9□□□□□ -0.66
Nphp3-207ENSMUST00000194774 Golga3P55937 1487 aa10.87□□□□□ -0.67
Nphp3-207ENSMUST00000194774 Phldb1Q6PDH0 1371 aaKnown RBP10.86□□□□□ -0.67
Nphp3-207ENSMUST00000194774 Ifnlr1Q8CGK5 535 aa10.86□□□□□ -0.67
Nphp3-207ENSMUST00000194774 Kcna4Q61423 654 aa10.85□□□□□ -0.67
Nphp3-207ENSMUST00000194774 Lmod2Q3UHZ5 550 aa10.84□□□□□ -0.67
Nphp3-207ENSMUST00000194774 Crybg2B7ZCC2 1516 aa10.83□□□□□ -0.68
Nphp3-207ENSMUST00000194774 Hmgb1P63158 215 aaKnown RBP10.83□□□□□ -0.68
Nphp3-207ENSMUST00000194774 Eid3Q3V124 375 aa10.82□□□□□ -0.68
Nphp3-207ENSMUST00000194774 Ccer2J3QPU5 274 aa10.81□□□□□ -0.68
Nphp3-207ENSMUST00000194774 Fbxo3Q9DC63 480 aa10.81□□□□□ -0.68
Nphp3-207ENSMUST00000194774 Ncbp3Q8BZR9 615 aaKnown RBP10.79□□□□□ -0.68
Nphp3-207ENSMUST00000194774 Ccdc88bQ4QRL3 1481 aa10.78□□□□□ -0.68
Nphp3-207ENSMUST00000194774 Ccdc9Q8VC31 543 aaKnown RBP10.76□□□□□ -0.69
Nphp3-207ENSMUST00000194774 Dnajc5bQ9CQ94 199 aa10.75□□□□□ -0.69
Nphp3-207ENSMUST00000194774 Fkbp15Q6P9Q6 1216 aaKnown RBP10.74□□□□□ -0.69
Nphp3-207ENSMUST00000194774 Mapk8ip2Q9ERE9 830 aa10.73□□□□□ -0.69
Nphp3-207ENSMUST00000194774 4933402E13RikQ9D4D2 429 aa10.73□□□□□ -0.69
Nphp3-207ENSMUST00000194774 Ccdc18Q640L5 1455 aa10.72□□□□□ -0.69
Nphp3-207ENSMUST00000194774 Calr4Q3TQS0 420 aa10.68□□□□□ -0.7
Nphp3-207ENSMUST00000194774 Smarca4Q3TKT4 1613 aaKnown RBP10.68□□□□□ -0.7
Nphp3-207ENSMUST00000194774 Cecr2E9Q2Z1 1453 aa10.67□□□□□ -0.7
Nphp3-207ENSMUST00000194774 Smarca2Q6DIC0 1577 aa10.67□□□□□ -0.7
Nphp3-207ENSMUST00000194774 Cux2P70298 1426 aa10.66□□□□□ -0.7
Nphp3-207ENSMUST00000194774 BlmO88700 1416 aa10.65□□□□□ -0.7
Nphp3-207ENSMUST00000194774 Setd5Q5XJV7 1441 aa10.65□□□□□ -0.7
Nphp3-207ENSMUST00000194774 SafbD3YXK2 937 aaKnown RBP10.63□□□□□ -0.71
Nphp3-207ENSMUST00000194774 PtmaP26350 111 aa10.62□□□□□ -0.71
Nphp3-207ENSMUST00000194774 Eea1Q8BL66 1411 aa10.61□□□□□ -0.71
Nphp3-207ENSMUST00000194774 AcrbpQ3V140 540 aa10.6□□□□□ -0.71
Nphp3-207ENSMUST00000194774 Iqgap2Q3UQ44 1575 aa10.6□□□□□ -0.71
Nphp3-207ENSMUST00000194774 BicraF8VPZ9 1578 aa10.59□□□□□ -0.71
Nphp3-207ENSMUST00000194774 CftrP26361 1476 aa10.59□□□□□ -0.71
Nphp3-207ENSMUST00000194774 Fam71e1A1L3C1 212 aa10.59□□□□□ -0.71
Nphp3-207ENSMUST00000194774 Hnrnpul2Q00PI9 745 aaKnown RBP10.58□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Ppp4r2Q0VGB7 417 aa10.58□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Brd2Q7JJ13 798 aaKnown RBP10.58□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Irx6Q9ER75 438 aa10.58□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Irx3P81067 507 aa10.57□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Wdr43Q6ZQL4 677 aaKnown RBP10.57□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Pabpn1Q8CCS6 302 aaKnown RBP10.56□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Mrs2Q5NCE8 434 aa10.55□□□□□ -0.72
Nphp3-207ENSMUST00000194774 HomezQ80W88 542 aa10.54□□□□□ -0.72
Nphp3-207ENSMUST00000194774 BbxQ8VBW5 907 aa10.54□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Upf2A2AT37 1269 aaKnown RBP10.54□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Hdac5Q9Z2V6 1113 aa10.53□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Kiaa1211Q5PR69 1207 aa10.53□□□□□ -0.72
Nphp3-207ENSMUST00000194774 DekQ7TNV0 380 aaKnown RBP10.53□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Fmn1Q05860 1466 aa10.52□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Cep162Q6ZQ06 1403 aa10.52□□□□□ -0.72
Nphp3-207ENSMUST00000194774 Arhgap27A2AB59 869 aa10.52□□□□□ -0.72
Nphp3-207ENSMUST00000194774 1700019A02RikA0A087WPV9 146 aa10.52□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Chic2Q9D9G3 165 aa10.52□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Gm13697A2AK42 830 aa10.51□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Plcd4Q8K3R3 807 aa10.51□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Ecm2Q5FW85 670 aa10.5□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Sparcl1P70663 650 aa10.5□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Psmd1Q3TXS7 953 aa10.49□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Skap1Q3UUV5 355 aa10.49□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Mrc2Q64449 1479 aa10.49□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Ccdc96Q9CR92 584 aa10.49□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Arid4aF8VPQ2 1261 aaKnown RBP10.48□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Ppp1r18Q8BQ30 594 aa10.48□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Lmod3E9QA62 571 aa10.48□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Erich6D3Z6S9 713 aa10.47□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Nlrp6Q91WS2 869 aa10.47□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Mia2Q91ZV0 1396 aa10.46□□□□□ -0.73
Nphp3-207ENSMUST00000194774 Synj1Q8CHC4 1574 aa10.46□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Zbtb4Q5F293 982 aa10.46□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Cc2d2aQ8CFW7 1633 aa10.45□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Tnnt2P50752 301 aa10.45□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Hsp90b1P08113 802 aaKnown RBP10.45□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Dhx29Q6PGC1 1365 aaKnown RBP10.44□□□□□ -0.74
Nphp3-207ENSMUST00000194774 AknaQ80VW7 1404 aa10.44□□□□□ -0.74
Nphp3-207ENSMUST00000194774 LrpprcQ6PB66 1392 aaKnown RBP10.44□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Frmpd1A2AKB4 1549 aa10.44□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Ube2q2Q8K2Z8 378 aa10.43□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Safb2Q80YR5 991 aaKnown RBP10.43□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Baz1bQ9Z277 1479 aa10.43□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Rsph4aQ8BYM7 716 aa10.42□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Fgd1P52734 960 aa10.41□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Znf526Q8BI66 675 aa10.41□□□□□ -0.74
Nphp3-207ENSMUST00000194774 AppP12023 770 aa10.41□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Gtf3c3Q3TMP1 882 aa10.41□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Cttnbp2B9EJA2 1648 aa10.4□□□□□ -0.74
Nphp3-207ENSMUST00000194774 Rad21Q61550 635 aaKnown RBP10.4□□□□□ -0.75
Nphp3-207ENSMUST00000194774 PtmsQ9D0J8 101 aaKnown RBP10.4□□□□□ -0.75
Nphp3-207ENSMUST00000194774 Clstn2Q9ER65 966 aa10.4□□□□□ -0.75
Nphp3-207ENSMUST00000194774 Samd1D3YXK1 519 aa10.39□□□□□ -0.75
Nphp3-207ENSMUST00000194774 Gpatch11Q3UFS4 262 aa10.39□□□□□ -0.75
Nphp3-207ENSMUST00000194774 Hsp90aa1P07901 733 aaKnown RBP10.38□□□□□ -0.75
Nphp3-207ENSMUST00000194774 Prm3Q62100 101 aa10.38□□□□□ -0.75
Nphp3-207ENSMUST00000194774 Ofd1Q80Z25 1017 aa10.37□□□□□ -0.75
Nphp3-207ENSMUST00000194774 Cwc22Q8C5N3 908 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms