RNA–Protein interactions for RNA: ENSMUST00000183820.1

Trav6d-4-202, Transcript of T cell receptor alpha variable 6D-4 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav6d-4, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4-202ENSMUST00000183820 Znf703P0CL69 594 aa14.03□□□□□ -0.16
Trav6d-4-202ENSMUST00000183820 Synj1Q8CHC4 1574 aa14.01□□□□□ -0.17
Trav6d-4-202ENSMUST00000183820 Fbln2P37889 1221 aa14□□□□□ -0.17
Trav6d-4-202ENSMUST00000183820 Pelp1Q9DBD5 1123 aaKnown RBP14□□□□□ -0.17
Trav6d-4-202ENSMUST00000183820 Kif15Q6P9L6 1387 aa13.99□□□□□ -0.17
Trav6d-4-202ENSMUST00000183820 Ube2uB1AUC4 352 aa13.99□□□□□ -0.17
Trav6d-4-202ENSMUST00000183820 Zcchc11B2RX14 1644 aaKnown RBP13.98□□□□□ -0.17
Trav6d-4-202ENSMUST00000183820 Styxl1Q9DAR2 321 aa13.98□□□□□ -0.17
Trav6d-4-202ENSMUST00000183820 Rtn4Q99P72 1162 aaKnown RBP13.96□□□□□ -0.17
Trav6d-4-202ENSMUST00000183820 Urb2E9Q7L1 1524 aaKnown RBP13.94□□□□□ -0.18
Trav6d-4-202ENSMUST00000183820 Kcnn1Q9EQR3 537 aa13.93□□□□□ -0.18
Trav6d-4-202ENSMUST00000183820 Plb1Q3TTY0 1478 aa13.91□□□□□ -0.18
Trav6d-4-202ENSMUST00000183820 Arhgef5E9Q7D5 1581 aa13.89□□□□□ -0.19
Trav6d-4-202ENSMUST00000183820 Npm3Q9CPP0 175 aaKnown RBP13.89□□□□□ -0.19
Trav6d-4-202ENSMUST00000183820 Npm1Q61937 292 aaKnown RBP13.88□□□□□ -0.19
Trav6d-4-202ENSMUST00000183820 Cacnb1Q8R3Z5 597 aa13.87□□□□□ -0.19
Trav6d-4-202ENSMUST00000183820 Prr29B1ARI9 187 aa13.84□□□□□ -0.19
Trav6d-4-202ENSMUST00000183820 Brd4Q9ESU6 1400 aaKnown RBP13.81□□□□□ -0.2
Trav6d-4-202ENSMUST00000183820 Tshz2Q68FE9 1030 aa13.81□□□□□ -0.2
Trav6d-4-202ENSMUST00000183820 Cep164Q5DU05 1446 aa13.81□□□□□ -0.2
Trav6d-4-202ENSMUST00000183820 Rusc2Q80U22 1514 aa13.8□□□□□ -0.2
Trav6d-4-202ENSMUST00000183820 Lamc3Q9R0B6 1581 aa13.79□□□□□ -0.2
Trav6d-4-202ENSMUST00000183820 MpndQ3TV65 487 aa13.78□□□□□ -0.2
Trav6d-4-202ENSMUST00000183820 Dhx29Q6PGC1 1365 aaKnown RBP13.78□□□□□ -0.2
Trav6d-4-202ENSMUST00000183820 Ttbk1Q6PCN3 1308 aa13.77□□□□□ -0.21
Trav6d-4-202ENSMUST00000183820 Esf1Q3V1V3 845 aaKnown RBP13.76□□□□□ -0.21
Trav6d-4-202ENSMUST00000183820 Adgrl3Q80TS3 1537 aa13.75□□□□□ -0.21
Trav6d-4-202ENSMUST00000183820 Pitpnm1O35954 1243 aa13.74□□□□□ -0.21
Trav6d-4-202ENSMUST00000183820 Crocc2F6XLV1 1638 aa13.72□□□□□ -0.21
Trav6d-4-202ENSMUST00000183820 Clcn6O35454 870 aa13.71□□□□□ -0.21
Trav6d-4-202ENSMUST00000183820 Skida1Q80YR3 822 aa13.7□□□□□ -0.22
Trav6d-4-202ENSMUST00000183820 Ift140E9PY46 1464 aa13.67□□□□□ -0.22
Trav6d-4-202ENSMUST00000183820 Pip4p2Q9CZX7 257 aa13.67□□□□□ -0.22
Trav6d-4-202ENSMUST00000183820 Kank3Q9Z1P7 791 aa13.66□□□□□ -0.22
Trav6d-4-202ENSMUST00000183820 PtprtQ99M80 1454 aa13.65□□□□□ -0.22
Trav6d-4-202ENSMUST00000183820 Il27Q8K3I6 234 aa13.64□□□□□ -0.23
Trav6d-4-202ENSMUST00000183820 Cep170Q6A065 1588 aa13.63□□□□□ -0.23
Trav6d-4-202ENSMUST00000183820 PtprkP35822 1457 aa13.62□□□□□ -0.23
Trav6d-4-202ENSMUST00000183820 LrpprcQ6PB66 1392 aaKnown RBP13.62□□□□□ -0.23
Trav6d-4-202ENSMUST00000183820 Trim35Q8C006 501 aa13.62□□□□□ -0.23
Trav6d-4-202ENSMUST00000183820 Gm156Q58A37 223 aa13.6□□□□□ -0.23
Trav6d-4-202ENSMUST00000183820 Ccdc18Q640L5 1455 aa13.58□□□□□ -0.24
Trav6d-4-202ENSMUST00000183820 Gapvd1Q6PAR5 1458 aa13.57□□□□□ -0.24
Trav6d-4-202ENSMUST00000183820 Ccdc136Q3TVA9 1136 aa13.57□□□□□ -0.24
Trav6d-4-202ENSMUST00000183820 Pprc1Q6NZN1 1644 aa13.53□□□□□ -0.24
Trav6d-4-202ENSMUST00000183820 Camsap1A2AHC3 1581 aa13.51□□□□□ -0.25
Trav6d-4-202ENSMUST00000183820 Plekhg3Q4VAC9 1341 aa13.51□□□□□ -0.25
Trav6d-4-202ENSMUST00000183820 Rtl1Q7M732 1744 aa13.5□□□□□ -0.25
Trav6d-4-202ENSMUST00000183820 Disp1Q3TDN0 1521 aa13.5□□□□□ -0.25
Trav6d-4-202ENSMUST00000183820 PogzQ8BZH4 1409 aaKnown RBP13.5□□□□□ -0.25
Trav6d-4-202ENSMUST00000183820 Setd1bQ8CFT2 1985 aa13.49□□□□□ -0.25
Trav6d-4-202ENSMUST00000183820 TnnQ80Z71 1560 aa13.47□□□□□ -0.25
Trav6d-4-202ENSMUST00000183820 Nup160Q9Z0W3 1402 aaKnown RBP13.46□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Ppp1r37Q8BKR5 712 aa13.44□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Cc2d2bA0A286YDU8 1405 aa13.44□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Golga3P55937 1487 aa13.43□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Tcf3P15806 651 aa13.43□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Duox2A2AQ99 1517 aa13.43□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Pbrm1Q8BSQ9 1634 aaKnown RBP13.41□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Fgd6Q69ZL1 1399 aa13.41□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Cadps2Q8BYR5 1297 aa13.4□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Rapgef2Q8CHG7 1496 aa13.4□□□□□ -0.26
Trav6d-4-202ENSMUST00000183820 Lrrc43Q3V0L5 667 aa13.38□□□□□ -0.27
Trav6d-4-202ENSMUST00000183820 Samd9lQ69Z37 1561 aa13.37□□□□□ -0.27
Trav6d-4-202ENSMUST00000183820 Ythdc2B2RR83 1445 aaKnown RBP13.37□□□□□ -0.27
Trav6d-4-202ENSMUST00000183820 Abcc1O35379 1528 aa13.36□□□□□ -0.27
Trav6d-4-202ENSMUST00000183820 AknaQ80VW7 1404 aa13.35□□□□□ -0.27
Trav6d-4-202ENSMUST00000183820 AqrQ8CFQ3 1481 aaKnown RBP13.35□□□□□ -0.27
Trav6d-4-202ENSMUST00000183820 Nyap1Q6PFX7 833 aa13.34□□□□□ -0.27
Trav6d-4-202ENSMUST00000183820 Setbp1Q9Z180 1582 aa13.33□□□□□ -0.28
Trav6d-4-202ENSMUST00000183820 Ppp1r18Q8BQ30 594 aa13.33□□□□□ -0.28
Trav6d-4-202ENSMUST00000183820 Top2aQ01320 1528 aaKnown RBP13.3□□□□□ -0.28
Trav6d-4-202ENSMUST00000183820 Chd1P40201 1711 aa13.3□□□□□ -0.28
Trav6d-4-202ENSMUST00000183820 Jarid2Q62315 1234 aa13.29□□□□□ -0.28
Trav6d-4-202ENSMUST00000183820 Rad54l2Q99NG0 1466 aa13.28□□□□□ -0.28
Trav6d-4-202ENSMUST00000183820 Grin2aP35436 1464 aa13.27□□□□□ -0.29
Trav6d-4-202ENSMUST00000183820 Ak9G3UYQ4 1894 aa13.26□□□□□ -0.29
Trav6d-4-202ENSMUST00000183820 Grin2bQ01097 1482 aa13.25□□□□□ -0.29
Trav6d-4-202ENSMUST00000183820 Magi3Q9EQJ9 1476 aa13.25□□□□□ -0.29
Trav6d-4-202ENSMUST00000183820 Alpk3Q924C5 1678 aa13.24□□□□□ -0.29
Trav6d-4-202ENSMUST00000183820 Ccdc88bQ4QRL3 1481 aa13.23□□□□□ -0.29
Trav6d-4-202ENSMUST00000183820 CadpsQ80TJ1 1355 aa13.21□□□□□ -0.29
Trav6d-4-202ENSMUST00000183820 Soga1E1U8D0 1418 aa13.19□□□□□ -0.3
Trav6d-4-202ENSMUST00000183820 AdgbG3UZ78 1657 aa13.17□□□□□ -0.3
Trav6d-4-202ENSMUST00000183820 EprsQ8CGC7 1512 aaKnown RBP13.16□□□□□ -0.3
Trav6d-4-202ENSMUST00000183820 AI481877A2ALV5 1481 aa13.15□□□□□ -0.3
Trav6d-4-202ENSMUST00000183820 Arhgef11Q68FM7 1552 aa13.15□□□□□ -0.3
Trav6d-4-202ENSMUST00000183820 Efcab5A0JP43 1406 aa13.13□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Dnmt1P13864 1620 aaKnown RBP13.13□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Neo1P97798 1493 aa13.13□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 SnphQ80U23 495 aa13.12□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 BC005561E9Q5E2 1589 aa13.11□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Ttc37F8VPK0 1563 aa13.11□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Mapkbp1Q6NS57 1503 aa13.11□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Cngb1E1AZ71 1325 aa13.11□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Pla2r1Q62028 1487 aa13.1□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Clasp1Q80TV8 1535 aaKnown RBP13.1□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Cyb5rlB1AS42 316 aa13.1□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Fmn1Q05860 1466 aa13.1□□□□□ -0.31
Trav6d-4-202ENSMUST00000183820 Gpatch8A2A6A1 1505 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 100.5 ms