RNA–Protein interactions for RNA: ENSMUST00000173739.7

Apoe-205, Transcript of Apolipoprotein E, mouse

APPRIS P1 TSL 1 (best) BASIC

Gene Apoe, Length 1,221 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Apoe-205	ENSMUST00000173739	Rapgef2	Q8CHG7	1496 aa		34.69	■■■■□ 3.14
Apoe-205	ENSMUST00000173739	Chd1	P40201	1711 aa		34.6	■■■■□ 3.13
Apoe-205	ENSMUST00000173739	Cadps	Q80TJ1	1355 aa		34.55	■■■■□ 3.12
Apoe-205	ENSMUST00000173739	Top2a	Q01320	1528 aa	Known RBP	34.5	■■■■□ 3.11
Apoe-205	ENSMUST00000173739	Setbp1	Q9Z180	1582 aa		34.49	■■■■□ 3.11
Apoe-205	ENSMUST00000173739	Pla2r1	Q62028	1487 aa		34.46	■■■■□ 3.11
Apoe-205	ENSMUST00000173739	Soga1	E1U8D0	1418 aa		34.45	■■■■□ 3.11
Apoe-205	ENSMUST00000173739	Ppp1r18	Q8BQ30	594 aa		34.44	■■■■□ 3.1
Apoe-205	ENSMUST00000173739	Gpatch8	A2A6A1	1505 aa		34.43	■■■■□ 3.1
Apoe-205	ENSMUST00000173739	Plekhg3	Q4VAC9	1341 aa		34.39	■■■■□ 3.1
Apoe-205	ENSMUST00000173739	Dnmt1	P13864	1620 aa	Known RBP	34.37	■■■■□ 3.09
Apoe-205	ENSMUST00000173739	Ak9	G3UYQ4	1894 aa		34.33	■■■■□ 3.09
Apoe-205	ENSMUST00000173739	Nrk	Q9R0G8	1455 aa		34.32	■■■■□ 3.08
Apoe-205	ENSMUST00000173739	Neo1	P97798	1493 aa		34.31	■■■■□ 3.08
Apoe-205	ENSMUST00000173739	Synm	Q70IV5	1561 aa		34.31	■■■■□ 3.08
Apoe-205	ENSMUST00000173739	BC005561	E9Q5E2	1589 aa		34.24	■■■■□ 3.07
Apoe-205	ENSMUST00000173739	Gm14025	A2AP89	1413 aa		34.22	■■■■□ 3.07
Apoe-205	ENSMUST00000173739	AI481877	A2ALV5	1481 aa		34.22	■■■■□ 3.07
Apoe-205	ENSMUST00000173739	Arhgap27	A2AB59	869 aa		34.22	■■■■□ 3.07
Apoe-205	ENSMUST00000173739	Abcc2	Q8VI47	1543 aa		34.19	■■■■□ 3.06
Apoe-205	ENSMUST00000173739	Abca16	E9PWJ7	1678 aa		34.17	■■■■□ 3.06
Apoe-205	ENSMUST00000173739	Map3k4	O08648	1597 aa		34.16	■■■■□ 3.06
Apoe-205	ENSMUST00000173739	Shroom4	Q1W617	1475 aa		34.14	■■■■□ 3.06
Apoe-205	ENSMUST00000173739	Eprs	Q8CGC7	1512 aa	Known RBP	34.13	■■■■□ 3.05
Apoe-205	ENSMUST00000173739	Ifnlr1	Q8CGK5	535 aa		34.11	■■■■□ 3.05
Apoe-205	ENSMUST00000173739	Tchh	A0A0B4J1F9	1599 aa		34.1	■■■■□ 3.05
Apoe-205	ENSMUST00000173739	Pxdn	Q3UQ28	1475 aa		34.07	■■■■□ 3.05
Apoe-205	ENSMUST00000173739	Wiz	O88286	1684 aa	Known RBP	34.06	■■■■□ 3.04
Apoe-205	ENSMUST00000173739	Zeb1	Q64318	1117 aa		34.05	■■■■□ 3.04
Apoe-205	ENSMUST00000173739	Ccdc88b	Q4QRL3	1481 aa		34.03	■■■■□ 3.04
Apoe-205	ENSMUST00000173739	Arhgef12	Q8R4H2	1543 aa	Known RBP	34.03	■■■■□ 3.04
Apoe-205	ENSMUST00000173739	Adgb	G3UZ78	1657 aa		34.01	■■■■□ 3.04
Apoe-205	ENSMUST00000173739	Clasp1	Q80TV8	1535 aa	Known RBP	33.98	■■■■□ 3.03
Apoe-205	ENSMUST00000173739	Adamts12	Q811B3	1600 aa		33.95	■■■■□ 3.03
Apoe-205	ENSMUST00000173739	Ttc37	F8VPK0	1563 aa		33.94	■■■■□ 3.02
Apoe-205	ENSMUST00000173739	Eif4g1	Q6NZJ6	1600 aa	Known RBP	33.92	■■■■□ 3.02
Apoe-205	ENSMUST00000173739	Mapkbp1	Q6NS57	1503 aa		33.9	■■■■□ 3.02
Apoe-205	ENSMUST00000173739	Slx4	Q6P1D7	1565 aa		33.89	■■■■□ 3.02
Apoe-205	ENSMUST00000173739	Arhgef11	Q68FM7	1552 aa		33.89	■■■■□ 3.02
Apoe-205	ENSMUST00000173739	Alpk3	Q924C5	1678 aa		33.85	■■■■□ 3.01
Apoe-205	ENSMUST00000173739	Jph4	Q80WT0	628 aa		33.78	■■■■□ 3
Apoe-205	ENSMUST00000173739	Arid3c	A6PWV5	409 aa		33.77	■■■■□ 3
Apoe-205	ENSMUST00000173739	Plppr3	Q7TPB0	716 aa		33.76	■■■□□ 2.99
Apoe-205	ENSMUST00000173739	Depdc5	P61460	1591 aa		33.76	■■■□□ 2.99
Apoe-205	ENSMUST00000173739	Fkbp15	Q6P9Q6	1216 aa	Known RBP	33.73	■■■□□ 2.99
Apoe-205	ENSMUST00000173739	Rpap1	Q80TE0	1409 aa		33.68	■■■□□ 2.98
Apoe-205	ENSMUST00000173739	Mroh2b	Q7M6Y6	1581 aa		33.64	■■■□□ 2.98
Apoe-205	ENSMUST00000173739	Lrrc9	Q8CDN9	1456 aa		33.63	■■■□□ 2.97
Apoe-205	ENSMUST00000173739	Zfyve16	Q80U44	1528 aa		33.63	■■■□□ 2.97
Apoe-205	ENSMUST00000173739	Fndc1	E9Q043	1732 aa		33.62	■■■□□ 2.97
Apoe-205	ENSMUST00000173739	Chic1	Q8CBW7	227 aa		33.62	■■■□□ 2.97
Apoe-205	ENSMUST00000173739	Igf1r	Q60751	1373 aa		33.58	■■■□□ 2.97
Apoe-205	ENSMUST00000173739	Gm7298	A0A0N4SVU1	1476 aa		33.54	■■■□□ 2.96
Apoe-205	ENSMUST00000173739	Znf608	Q56A10	1511 aa		33.53	■■■□□ 2.96
Apoe-205	ENSMUST00000173739	Dnajc5g	Q8C632	165 aa		33.51	■■■□□ 2.95
Apoe-205	ENSMUST00000173739	Abca5	Q8K448	1642 aa		33.5	■■■□□ 2.95
Apoe-205	ENSMUST00000173739	Mlec	Q6ZQI3	291 aa	Known RBP	33.47	■■■□□ 2.95
Apoe-205	ENSMUST00000173739	Kdm5b	Q80Y84	1544 aa		33.46	■■■□□ 2.95
Apoe-205	ENSMUST00000173739	Rrbp1	Q99PL5	1605 aa	Known RBP	33.44	■■■□□ 2.94
Apoe-205	ENSMUST00000173739	Npm2	Q80W85	207 aa		33.44	■■■□□ 2.94
Apoe-205	ENSMUST00000173739	Wdr7	Q920I9	1489 aa		33.43	■■■□□ 2.94
Apoe-205	ENSMUST00000173739	Carmil1	Q6EDY6	1374 aa		33.41	■■■□□ 2.94
Apoe-205	ENSMUST00000173739	Wrn	O09053	1401 aa		33.39	■■■□□ 2.94
Apoe-205	ENSMUST00000173739	Cyb5rl	B1AS42	316 aa		33.39	■■■□□ 2.94
Apoe-205	ENSMUST00000173739	Map3k1	P53349	1493 aa		33.36	■■■□□ 2.93
Apoe-205	ENSMUST00000173739	Agl	F8VPN4	1532 aa		33.26	■■■□□ 2.91
Apoe-205	ENSMUST00000173739	Nhs	B1AV60	1647 aa		33.24	■■■□□ 2.91
Apoe-205	ENSMUST00000173739	Cul7	Q8VE73	1689 aa		33.23	■■■□□ 2.91
Apoe-205	ENSMUST00000173739	Polr1a	O35134	1717 aa	Known RBP	33.22	■■■□□ 2.91
Apoe-205	ENSMUST00000173739	Brwd3	A2AHJ4	1799 aa		33.22	■■■□□ 2.91
Apoe-205	ENSMUST00000173739	Kdm6b	Q5NCY0	1641 aa		33.17	■■■□□ 2.9
Apoe-205	ENSMUST00000173739	Rnf17	Q99MV7	1640 aa		33.17	■■■□□ 2.9
Apoe-205	ENSMUST00000173739	Atp10d	Q8K2X1	1416 aa		33.16	■■■□□ 2.9
Apoe-205	ENSMUST00000173739	Ercc6l2	Q9JIM3	1537 aa		33.12	■■■□□ 2.89
Apoe-205	ENSMUST00000173739	Arhgap31	A6X8Z5	1425 aa		33.11	■■■□□ 2.89
Apoe-205	ENSMUST00000173739	Arhgap35	Q91YM2	1499 aa		33.05	■■■□□ 2.88
Apoe-205	ENSMUST00000173739	Ccdc141	E9Q8Q6	1531 aa		33.05	■■■□□ 2.88
Apoe-205	ENSMUST00000173739	Hecw2	Q6I6G8	1578 aa		33.04	■■■□□ 2.88
Apoe-205	ENSMUST00000173739	Cux1	P53564	1515 aa		33.02	■■■□□ 2.88
Apoe-205	ENSMUST00000173739	Naip2	Q9QUK4	1447 aa		32.96	■■■□□ 2.87
Apoe-205	ENSMUST00000173739	A2m	Q6GQT1	1474 aa		32.94	■■■□□ 2.86
Apoe-205	ENSMUST00000173739	Gcc2	Q8CHG3	1679 aa		32.91	■■■□□ 2.86
Apoe-205	ENSMUST00000173739	Mroh2a	D3Z750	1679 aa		32.88	■■■□□ 2.85
Apoe-205	ENSMUST00000173739	Abca8b	Q8K440	1620 aa		32.86	■■■□□ 2.85
Apoe-205	ENSMUST00000173739	Fyco1	Q8VDC1	1437 aa		32.85	■■■□□ 2.85
Apoe-205	ENSMUST00000173739	Clip1	Q922J3	1391 aa		32.83	■■■□□ 2.85
Apoe-205	ENSMUST00000173739	Kiaa1210	E9Q0C6	1637 aa		32.81	■■■□□ 2.84
Apoe-205	ENSMUST00000173739	Fancd2	Q80V62	1450 aa		32.77	■■■□□ 2.84
Apoe-205	ENSMUST00000173739	Fbxo41	Q6NS60	873 aa		32.72	■■■□□ 2.83
Apoe-205	ENSMUST00000173739	Qser1	A2BIE1	1698 aa		32.69	■■■□□ 2.82
Apoe-205	ENSMUST00000173739	Ncoa2	Q61026	1462 aa		32.69	■■■□□ 2.82
Apoe-205	ENSMUST00000173739	Kif14	L0N7N1	1674 aa	Known RBP	32.69	■■■□□ 2.82
Apoe-205	ENSMUST00000173739	Rapgef6	Q5NCJ1	1609 aa		32.66	■■■□□ 2.82
Apoe-205	ENSMUST00000173739	Ptprm	P28828	1452 aa		32.66	■■■□□ 2.82
Apoe-205	ENSMUST00000173739	Blm	O88700	1416 aa		32.65	■■■□□ 2.82
Apoe-205	ENSMUST00000173739	Synj2	Q9D2G5	1434 aa		32.65	■■■□□ 2.82
Apoe-205	ENSMUST00000173739	Mlh3	A0A1Y7VMP7	1443 aa		32.62	■■■□□ 2.81
Apoe-205	ENSMUST00000173739	Gab3	Q8BSM5	595 aa		32.61	■■■□□ 2.81
Apoe-205	ENSMUST00000173739	Arap1	Q4LDD4	1452 aa		32.58	■■■□□ 2.81
Apoe-205	ENSMUST00000173739	Neurl4	Q5NCX5	1563 aa		32.55	■■■□□ 2.8

Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms