RNA–Protein interactions for RNA: ENSMUST00000113457.8

Col4a3-201, Transcript of Collagen alpha-3(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3, Length 8,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3-201ENSMUST00000113457 Clstn1Q9EPL2 979 aa14.06□□□□□ -0.16
Col4a3-201ENSMUST00000113457 Vsig10D3YX43 558 aa14.05□□□□□ -0.16
Col4a3-201ENSMUST00000113457 Pds5bQ4VA53 1446 aaKnown RBP14.04□□□□□ -0.16
Col4a3-201ENSMUST00000113457 Csrnp3P59055 597 aa14.03□□□□□ -0.16
Col4a3-201ENSMUST00000113457 Supt5hO55201 1082 aaKnown RBP14.02□□□□□ -0.17
Col4a3-201ENSMUST00000113457 Plekhg3Q4VAC9 1341 aa14□□□□□ -0.17
Col4a3-201ENSMUST00000113457 Rtn4Q99P72 1162 aaKnown RBP13.99□□□□□ -0.17
Col4a3-201ENSMUST00000113457 Slc4a1apE9PX68 744 aa13.97□□□□□ -0.17
Col4a3-201ENSMUST00000113457 Sycp2Q9CUU3 1500 aa13.97□□□□□ -0.17
Col4a3-201ENSMUST00000113457 PnnO35691 725 aaKnown RBP13.96□□□□□ -0.17
Col4a3-201ENSMUST00000113457 Aplp2Q06335 707 aa13.95□□□□□ -0.18
Col4a3-201ENSMUST00000113457 Clstn2Q9ER65 966 aa13.94□□□□□ -0.18
Col4a3-201ENSMUST00000113457 Polr1aO35134 1717 aaKnown RBP13.93□□□□□ -0.18
Col4a3-201ENSMUST00000113457 Fmn1Q05860 1466 aa13.92□□□□□ -0.18
Col4a3-201ENSMUST00000113457 Mapk8ip2Q9ERE9 830 aa13.92□□□□□ -0.18
Col4a3-201ENSMUST00000113457 ClspnQ80YR7 1315 aa13.92□□□□□ -0.18
Col4a3-201ENSMUST00000113457 Rad21Q61550 635 aaKnown RBP13.91□□□□□ -0.18
Col4a3-201ENSMUST00000113457 MyclP10166 368 aa13.9□□□□□ -0.18
Col4a3-201ENSMUST00000113457 Trim26Q99PN3 545 aa13.9□□□□□ -0.18
Col4a3-201ENSMUST00000113457 Smarca4Q3TKT4 1613 aaKnown RBP13.89□□□□□ -0.19
Col4a3-201ENSMUST00000113457 Eea1Q8BL66 1411 aa13.89□□□□□ -0.19
Col4a3-201ENSMUST00000113457 Trim44Q9QXA7 346 aa13.88□□□□□ -0.19
Col4a3-201ENSMUST00000113457 Anks4bQ8K3X6 423 aa13.87□□□□□ -0.19
Col4a3-201ENSMUST00000113457 Baz1bQ9Z277 1479 aa13.86□□□□□ -0.19
Col4a3-201ENSMUST00000113457 Mier1Q5UAK0 511 aa13.85□□□□□ -0.19
Col4a3-201ENSMUST00000113457 Clip1Q922J3 1391 aa13.85□□□□□ -0.19
Col4a3-201ENSMUST00000113457 Arid4bA2CG63 1314 aaKnown RBP13.85□□□□□ -0.19
Col4a3-201ENSMUST00000113457 ScribQ80U72 1612 aa13.84□□□□□ -0.19
Col4a3-201ENSMUST00000113457 Prm3Q62100 101 aa13.83□□□□□ -0.2
Col4a3-201ENSMUST00000113457 Noc3lQ8VI84 807 aaKnown RBP13.82□□□□□ -0.2
Col4a3-201ENSMUST00000113457 Mia2Q91ZV0 1396 aa13.81□□□□□ -0.2
Col4a3-201ENSMUST00000113457 Zfp777B9EKF4 885 aa13.8□□□□□ -0.2
Col4a3-201ENSMUST00000113457 PtmaP26350 111 aa13.79□□□□□ -0.2
Col4a3-201ENSMUST00000113457 Ggt6Q6PDE7 497 aa13.79□□□□□ -0.2
Col4a3-201ENSMUST00000113457 Pes1Q9EQ61 584 aaKnown RBP13.78□□□□□ -0.2
Col4a3-201ENSMUST00000113457 NgefQ8CHT1 710 aa13.75□□□□□ -0.21
Col4a3-201ENSMUST00000113457 IqubQ8CDK3 788 aa13.73□□□□□ -0.21
Col4a3-201ENSMUST00000113457 Eif4g2Q62448 906 aaKnown RBP13.71□□□□□ -0.21
Col4a3-201ENSMUST00000113457 Eid3Q3V124 375 aa13.7□□□□□ -0.22
Col4a3-201ENSMUST00000113457 Ppp4r2Q0VGB7 417 aa13.7□□□□□ -0.22
Col4a3-201ENSMUST00000113457 Q8BT18 775 aa13.7□□□□□ -0.22
Col4a3-201ENSMUST00000113457 Gm6268A2A3U9 297 aa13.7□□□□□ -0.22
Col4a3-201ENSMUST00000113457 Hsp90ab1P11499 724 aaKnown RBP13.69□□□□□ -0.22
Col4a3-201ENSMUST00000113457 Exosc9Q9JHI7 438 aaKnown RBP13.68□□□□□ -0.22
Col4a3-201ENSMUST00000113457 Atad2bE9Q166 1460 aaKnown RBP13.68□□□□□ -0.22
Col4a3-201ENSMUST00000113457 Sh3bp5Q9Z131 463 aa13.66□□□□□ -0.22
Col4a3-201ENSMUST00000113457 Isy1Q69ZQ2 285 aaKnown RBP13.64□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Ubl4bQ9CQ84 188 aa13.64□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Trim30dE9PWL0 497 aa13.64□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Kif15Q6P9L6 1387 aa13.63□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Setd5Q5XJV7 1441 aa13.62□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Anapc15P60007 132 aa13.61□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Chic2Q9D9G3 165 aa13.61□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Adam1bQ8R534 806 aa13.61□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Ppm1fQ8CGA0 452 aa13.61□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Dnai2A2AC93 623 aa13.6□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Calr4Q3TQS0 420 aa13.6□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Cux1P53564 1515 aa13.59□□□□□ -0.23
Col4a3-201ENSMUST00000113457 Rpap1Q80TE0 1409 aa13.58□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Mak16Q8BGS0 296 aaKnown RBP13.57□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Iqcf3Q9D498 203 aa13.57□□□□□ -0.24
Col4a3-201ENSMUST00000113457 CftrP26361 1476 aa13.57□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Plcb2A3KGF7 1181 aa13.56□□□□□ -0.24
Col4a3-201ENSMUST00000113457 1700019A02RikA0A087WPV9 146 aa13.56□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Casc1Q6TDU8 730 aa13.56□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Kdm2aP59997 1161 aa13.56□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Mapk8ip3Q9ESN9 1337 aa13.56□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Rsph4aQ8BYM7 716 aa13.55□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Srpk2O54781 681 aaKnown RBP13.54□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Dhx57Q6P5D3 1388 aaKnown RBP13.54□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Znf316Q6PGE4 1016 aa13.54□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Cwc22Q8C5N3 908 aaKnown RBP13.54□□□□□ -0.24
Col4a3-201ENSMUST00000113457 BlmO88700 1416 aa13.53□□□□□ -0.24
Col4a3-201ENSMUST00000113457 BccipQ9CWI3 316 aa13.53□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Bcl11aQ9QYE3 773 aa13.52□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Rassf8Q8CJ96 419 aa13.52□□□□□ -0.24
Col4a3-201ENSMUST00000113457 Fyco1Q8VDC1 1437 aa13.52□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Gm38655A0A286YDK6 273 aa13.52□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Iqgap2Q3UQ44 1575 aa13.51□□□□□ -0.25
Col4a3-201ENSMUST00000113457 CanxP35564 591 aaKnown RBP13.51□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Nol10Q5RJG1 687 aaKnown RBP13.5□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Wwc2Q6NXJ0 1187 aa13.5□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Vps53Q8CCB4 832 aa13.49□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Chmp4bQ9D8B3 224 aaKnown RBP13.49□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Hsp90b1P08113 802 aaKnown RBP13.48□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Mrs2Q5NCE8 434 aa13.48□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Wdr43Q6ZQL4 677 aaKnown RBP13.47□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Synj1Q8CHC4 1574 aa13.47□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Ccdc88bQ4QRL3 1481 aa13.46□□□□□ -0.25
Col4a3-201ENSMUST00000113457 Rgl3Q3UYI5 709 aa13.46□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Gm20521D3Z5F7 333 aa13.46□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Stag3O70576 1240 aa13.45□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Ccdc27Q3V036 639 aa13.45□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Map3k1P53349 1493 aa13.45□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Tpm3-rs7D3Z2H9 248 aa13.45□□□□□ -0.26
Col4a3-201ENSMUST00000113457 MccE9PWI3 1003 aa13.45□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Ubap1lG3UW59 384 aa13.45□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Phldb1Q6PDH0 1371 aaKnown RBP13.45□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Map7O88735 730 aa13.44□□□□□ -0.26
Col4a3-201ENSMUST00000113457 Gm973E9Q295 1059 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms