RNA–Protein interactions for RNA: ENSMUST00000112371.8

Scn1a-204, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-204ENSMUST00000112371 Fyco1Q8VDC1 1437 aa7.11□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Gtf3c3Q3TMP1 882 aa7.1□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Isy1Q69ZQ2 285 aaKnown RBP7.1□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Mapk8ip3Q9ESN9 1337 aa7.1□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Gm13697A2AK42 830 aa7.09□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Fam50aQ9WV03 339 aaKnown RBP7.09□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Ercc6F8VPZ5 1481 aa7.09□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Bcl11aQ9QYE3 773 aa7.09□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Hsp90aa1P07901 733 aaKnown RBP7.08□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Os9Q8K2C7 672 aa7.08□□□□□ -1.28
Scn1a-204ENSMUST00000112371 UacaQ8CGB3 1411 aa7.07□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Map3k1P53349 1493 aa7.07□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Ccdc88bQ4QRL3 1481 aa7.07□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Map7O88735 730 aa7.07□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Dhx8A2A4P0 1244 aaKnown RBP7.07□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Pds5bQ4VA53 1446 aaKnown RBP7.07□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Wdr43Q6ZQL4 677 aaKnown RBP7.06□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Kdm5dQ62240 1548 aa7.06□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Calcoco2A2A6M5 331 aa7.06□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Npm1Q61937 292 aaKnown RBP7.06□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Gm973E9Q295 1059 aa7.06□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Dhx57Q6P5D3 1388 aaKnown RBP7.05□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Ifnlr1Q8CGK5 535 aa7.05□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Plppr3Q7TPB0 716 aa7.05□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Pknox2Q8BG99 474 aa7.05□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Fhad1A6PWD2 1420 aa7.05□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Mier1Q5UAK0 511 aa7.04□□□□□ -1.28
Scn1a-204ENSMUST00000112371 TimelessQ9R1X4 1197 aa7.04□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Ciz1Q8VEH2 845 aa7.04□□□□□ -1.28
Scn1a-204ENSMUST00000112371 AU015836B2RUM3 263 aa7.03□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Trim44Q9QXA7 346 aa7.03□□□□□ -1.28
Scn1a-204ENSMUST00000112371 Calr4Q3TQS0 420 aa7.02□□□□□ -1.29
Scn1a-204ENSMUST00000112371 DroshaQ5HZJ0 1373 aaKnown RBP7.02□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Smarca4Q3TKT4 1613 aaKnown RBP7.02□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Sycp2Q9CUU3 1500 aa7.01□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Ppm1eQ80TL0 749 aa7.01□□□□□ -1.29
Scn1a-204ENSMUST00000112371 CntlnA2AM05 1397 aa7□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Map7d2A2AG50 781 aa6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Arhgap35Q91YM2 1499 aa6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 NgefQ8CHT1 710 aa6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Chmp4cQ9D7F7 232 aa6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Gprasp1Q5U4C1 1347 aa6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Unc13aQ4KUS2 1712 aa6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Setd5Q5XJV7 1441 aa6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Slc24a1Q91WD8 1130 aa6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Ap3b1Q9Z1T1 1105 aa6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Zmym4A2A791 1549 aaKnown RBP6.99□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Kif21aQ9QXL2 1672 aa6.98□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Tcerg1Q8CGF7 1100 aaKnown RBP6.98□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Camsap2Q8C1B1 1461 aa6.98□□□□□ -1.29
Scn1a-204ENSMUST00000112371 DaxxO35613 739 aa6.97□□□□□ -1.29
Scn1a-204ENSMUST00000112371 KnstrnQ9D9Z1 312 aaKnown RBP6.97□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Ddrgk1Q80WW9 315 aa6.96□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Cfap65Q3V0B4 1847 aa6.96□□□□□ -1.29
Scn1a-204ENSMUST00000112371 Ccnb3Q810T2 1396 aa6.96□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Irx3P81067 507 aa6.95□□□□□ -1.3
Scn1a-204ENSMUST00000112371 NudcO35685 332 aaKnown RBP6.95□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Atp6v1dP57746 247 aa6.95□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Ppip5k1A2ARP1 1436 aa6.95□□□□□ -1.3
Scn1a-204ENSMUST00000112371 HnrnpuQ8VEK3 800 aaKnown RBP6.94□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Iqcf3Q9D498 203 aa6.93□□□□□ -1.3
Scn1a-204ENSMUST00000112371 PrkcshO08795 521 aa6.93□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Cep162Q6ZQ06 1403 aa6.93□□□□□ -1.3
Scn1a-204ENSMUST00000112371 BlmO88700 1416 aa6.92□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Gm13695A2AK44 830 aa6.91□□□□□ -1.3
Scn1a-204ENSMUST00000112371 CatipB9EKE5 520 aa6.91□□□□□ -1.3
Scn1a-204ENSMUST00000112371 WrnO09053 1401 aa6.91□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Mtus2Q3UHD3 1353 aa6.91□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Zbtb7cQ8VCZ7 619 aa6.91□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Atad2bE9Q166 1460 aaKnown RBP6.9□□□□□ -1.3
Scn1a-204ENSMUST00000112371 Smarce1O54941 411 aaKnown RBP6.9□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Nlrp6Q91WS2 869 aa6.9□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Atp1b4Q99ME6 356 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 MccE9PWI3 1003 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Cecr2E9Q2Z1 1453 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 CftrP26361 1476 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 TchhA0A0B4J1F9 1599 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Cspp1B2RX88 1205 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Polr3glQ8R0C0 218 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Chic1Q8CBW7 227 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Plekhh2Q8C115 1491 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Rapgef2Q8CHG7 1496 aa6.89□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Dnai2A2AC93 623 aa6.88□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Cgnl1Q6AW69 1298 aa6.88□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Top2bQ64511 1612 aa6.88□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Kdm2bQ6P1G2 1309 aa6.88□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Rab11fip3Q8CHD8 1047 aa6.88□□□□□ -1.31
Scn1a-204ENSMUST00000112371 NrkQ9R0G8 1455 aa6.88□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Hmgb1P63158 215 aaKnown RBP6.87□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Aebp1Q640N1 1128 aa6.87□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Efcab5A0JP43 1406 aa6.87□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Zmym3Q9JLM4 1370 aa6.87□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Eif4g2Q62448 906 aaKnown RBP6.87□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Carmil1Q6EDY6 1374 aa6.87□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Hnrnpul2Q00PI9 745 aaKnown RBP6.87□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Dusp9Q7TNL7 452 aa6.87□□□□□ -1.31
Scn1a-204ENSMUST00000112371 ScaperF8VQ70 1398 aaKnown RBP6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Tpm3P21107 285 aaKnown RBP6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Hmgb2P30681 210 aaKnown RBP6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Scaf1Q5U4C3 1256 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms