RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 NrkQ9R0G8 1455 aa11.06□□□□□ -0.64
Bdnf-203ENSMUST00000111043 Setd5Q5XJV7 1441 aa11.05□□□□□ -0.64
Bdnf-203ENSMUST00000111043 Sall2Q9QX96 1004 aa11.04□□□□□ -0.64
Bdnf-203ENSMUST00000111043 Nop58Q6DFW4 536 aaKnown RBP11.04□□□□□ -0.64
Bdnf-203ENSMUST00000111043 Mier1Q5UAK0 511 aa11.03□□□□□ -0.64
Bdnf-203ENSMUST00000111043 Kif21aQ9QXL2 1672 aa11.03□□□□□ -0.64
Bdnf-203ENSMUST00000111043 Efcab5A0JP43 1406 aa11.03□□□□□ -0.64
Bdnf-203ENSMUST00000111043 Plb1Q3TTY0 1478 aa11.03□□□□□ -0.64
Bdnf-203ENSMUST00000111043 1700123L14RikQ3V2K7 440 aa11.03□□□□□ -0.64
Bdnf-203ENSMUST00000111043 Aplp2Q06335 707 aa11.02□□□□□ -0.65
Bdnf-203ENSMUST00000111043 Csrnp3P59055 597 aa11.01□□□□□ -0.65
Bdnf-203ENSMUST00000111043 ArxO35085 564 aa11□□□□□ -0.65
Bdnf-203ENSMUST00000111043 Urb2E9Q7L1 1524 aaKnown RBP11□□□□□ -0.65
Bdnf-203ENSMUST00000111043 Mroh2bQ7M6Y6 1581 aa10.99□□□□□ -0.65
Bdnf-203ENSMUST00000111043 Eea1Q8BL66 1411 aa10.98□□□□□ -0.65
Bdnf-203ENSMUST00000111043 Samd9lQ69Z37 1561 aa10.97□□□□□ -0.65
Bdnf-203ENSMUST00000111043 Crocc2F6XLV1 1638 aa10.96□□□□□ -0.65
Bdnf-203ENSMUST00000111043 Fkbp15Q6P9Q6 1216 aaKnown RBP10.93□□□□□ -0.66
Bdnf-203ENSMUST00000111043 Carmil1Q6EDY6 1374 aa10.93□□□□□ -0.66
Bdnf-203ENSMUST00000111043 Arhgap27A2AB59 869 aa10.92□□□□□ -0.66
Bdnf-203ENSMUST00000111043 BlmO88700 1416 aa10.92□□□□□ -0.66
Bdnf-203ENSMUST00000111043 Arap1Q4LDD4 1452 aa10.92□□□□□ -0.66
Bdnf-203ENSMUST00000111043 Eif4g1Q6NZJ6 1600 aaKnown RBP10.92□□□□□ -0.66
Bdnf-203ENSMUST00000111043 ClspnQ80YR7 1315 aa10.91□□□□□ -0.66
Bdnf-203ENSMUST00000111043 Pelp1Q9DBD5 1123 aaKnown RBP10.91□□□□□ -0.66
Bdnf-203ENSMUST00000111043 Rpap1Q80TE0 1409 aa10.89□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Aebp1Q640N1 1128 aa10.89□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Cux1P53564 1515 aa10.89□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Fam50aQ9WV03 339 aaKnown RBP10.89□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Map3k1P53349 1493 aa10.88□□□□□ -0.67
Bdnf-203ENSMUST00000111043 SynmQ70IV5 1561 aa10.87□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Disp1Q3TDN0 1521 aa10.87□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Tnnt3Q9QZ47 272 aa10.87□□□□□ -0.67
Bdnf-203ENSMUST00000111043 AqrQ8CFQ3 1481 aaKnown RBP10.86□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Grin2aP35436 1464 aa10.85□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Pla2r1Q62028 1487 aa10.84□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Bcl11aQ9QYE3 773 aa10.84□□□□□ -0.67
Bdnf-203ENSMUST00000111043 Ifnlr1Q8CGK5 535 aa10.83□□□□□ -0.68
Bdnf-203ENSMUST00000111043 Lrriq1Q0P5X1 1673 aa10.83□□□□□ -0.68
Bdnf-203ENSMUST00000111043 EprsQ8CGC7 1512 aaKnown RBP10.83□□□□□ -0.68
Bdnf-203ENSMUST00000111043 Magi3Q9EQJ9 1476 aa10.83□□□□□ -0.68
Bdnf-203ENSMUST00000111043 Ankrd26Q811D2 1581 aa10.81□□□□□ -0.68
Bdnf-203ENSMUST00000111043 CadpsQ80TJ1 1355 aa10.81□□□□□ -0.68
Bdnf-203ENSMUST00000111043 Eid3Q3V124 375 aa10.8□□□□□ -0.68
Bdnf-203ENSMUST00000111043 Fyco1Q8VDC1 1437 aa10.79□□□□□ -0.68
Bdnf-203ENSMUST00000111043 Ift140E9PY46 1464 aa10.79□□□□□ -0.68
Bdnf-203ENSMUST00000111043 Naip1Q9QWK5 1403 aa10.78□□□□□ -0.68
Bdnf-203ENSMUST00000111043 Arhgef5E9Q7D5 1581 aa10.78□□□□□ -0.68
Bdnf-203ENSMUST00000111043 PxdnQ3UQ28 1475 aa10.78□□□□□ -0.68
Bdnf-203ENSMUST00000111043 TonslQ6NZL6 1363 aa10.77□□□□□ -0.68
Bdnf-203ENSMUST00000111043 WrnO09053 1401 aa10.77□□□□□ -0.68
Bdnf-203ENSMUST00000111043 Gm7298A0A0N4SVU1 1476 aa10.77□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Chic2Q9D9G3 165 aa10.77□□□□□ -0.69
Bdnf-203ENSMUST00000111043 AknaQ80VW7 1404 aa10.77□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Pcf11G3X9Z4 1553 aa10.77□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Stra8P70278 393 aa10.76□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Kif27Q7M6Z4 1394 aa10.76□□□□□ -0.69
Bdnf-203ENSMUST00000111043 WizO88286 1684 aaKnown RBP10.75□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Ppargc1bQ8VHJ7 1014 aa10.74□□□□□ -0.69
Bdnf-203ENSMUST00000111043 CntlnA2AM05 1397 aa10.73□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Slx4Q6P1D7 1565 aa10.73□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Nup160Q9Z0W3 1402 aaKnown RBP10.72□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Gm38655A0A286YDK6 273 aa10.71□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Rtl5Q5DTT4 599 aa10.71□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Setd1bQ8CFT2 1985 aa10.71□□□□□ -0.69
Bdnf-203ENSMUST00000111043 Tiam1Q60610 1591 aa10.7□□□□□ -0.7
Bdnf-203ENSMUST00000111043 Cc2d2bA0A286YDU8 1405 aa10.7□□□□□ -0.7
Bdnf-203ENSMUST00000111043 Gpatch8A2A6A1 1505 aa10.7□□□□□ -0.7
Bdnf-203ENSMUST00000111043 Polr1aO35134 1717 aaKnown RBP10.69□□□□□ -0.7
Bdnf-203ENSMUST00000111043 Aebp2Q9Z248 504 aaKnown RBP10.69□□□□□ -0.7
Bdnf-203ENSMUST00000111043 TchhA0A0B4J1F9 1599 aa10.66□□□□□ -0.7
Bdnf-203ENSMUST00000111043 Ccnb3Q810T2 1396 aa10.66□□□□□ -0.7
Bdnf-203ENSMUST00000111043 Zbtb7cQ8VCZ7 619 aa10.66□□□□□ -0.7
Bdnf-203ENSMUST00000111043 Erich3F6QRE9 1637 aa10.65□□□□□ -0.7
Bdnf-203ENSMUST00000111043 PrkcshO08795 521 aa10.65□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Neo1P97798 1493 aa10.65□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Lmo7E9PYF4 1699 aaKnown RBP10.65□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Soga1E1U8D0 1418 aa10.64□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Gm1043A0A140LJC2 1431 aa10.64□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Anp32aO35381 247 aa10.63□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Jph4Q80WT0 628 aa10.63□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Adamts12Q811B3 1600 aa10.63□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Ncapd3Q6ZQK0 1506 aa10.62□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Arhgap31A6X8Z5 1425 aa10.62□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Rusc2Q80U22 1514 aa10.62□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Abca16E9PWJ7 1678 aa10.61□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Fgd6Q69ZL1 1399 aa10.6□□□□□ -0.71
Bdnf-203ENSMUST00000111043 3425401B19RikD3Z1D3 1412 aa10.6□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Shroom2A2ALU4 1481 aa10.6□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Abcc2Q8VI47 1543 aa10.59□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Abca5Q8K448 1642 aa10.59□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Cabp1Q9JLK7 227 aa10.59□□□□□ -0.71
Bdnf-203ENSMUST00000111043 Ncoa3O09000 1398 aa10.58□□□□□ -0.72
Bdnf-203ENSMUST00000111043 Arid3cA6PWV5 409 aa10.58□□□□□ -0.72
Bdnf-203ENSMUST00000111043 BC005561E9Q5E2 1589 aa10.58□□□□□ -0.72
Bdnf-203ENSMUST00000111043 Fam71e1A1L3C1 212 aa10.57□□□□□ -0.72
Bdnf-203ENSMUST00000111043 Eif4g3Q80XI3 1579 aaKnown RBP10.57□□□□□ -0.72
Bdnf-203ENSMUST00000111043 NexmifQ5DTT1 1515 aa10.55□□□□□ -0.72
Bdnf-203ENSMUST00000111043 Mug1P28665 1476 aa10.54□□□□□ -0.72
Bdnf-203ENSMUST00000111043 Pbrm1Q8BSQ9 1634 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms