RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 NischQ80TM9 1593 aa14.54□□□□□ -0.08
Bdnf-203ENSMUST00000111043 Gm35339A0A140LHH9 1649 aa14.12□□□□□ -0.15
Bdnf-203ENSMUST00000111043 Abcc9P70170 1546 aa13.99□□□□□ -0.17
Bdnf-203ENSMUST00000111043 Abcc8B2RUS7 1588 aa13.84□□□□□ -0.19
Bdnf-203ENSMUST00000111043 Rhox8Q6VSS7 320 aa13.64□□□□□ -0.23
Bdnf-203ENSMUST00000111043 ScribQ80U72 1612 aa13.07□□□□□ -0.32
Bdnf-203ENSMUST00000111043 Mapk8ip2Q9ERE9 830 aa13.04□□□□□ -0.32
Bdnf-203ENSMUST00000111043 Kdm5dQ62240 1548 aa12.81□□□□□ -0.36
Bdnf-203ENSMUST00000111043 Rpgrip1Q9EPQ2 1331 aa12.77□□□□□ -0.37
Bdnf-203ENSMUST00000111043 Rb1cc1Q9ESK9 1588 aa12.72□□□□□ -0.37
Bdnf-203ENSMUST00000111043 NacadQ5SWP3 1504 aa12.71□□□□□ -0.37
Bdnf-203ENSMUST00000111043 Ccdc136Q3TVA9 1136 aa12.71□□□□□ -0.37
Bdnf-203ENSMUST00000111043 Dcaf1Q80TR8 1506 aa12.64□□□□□ -0.39
Bdnf-203ENSMUST00000111043 Zcchc6Q5BLK4 1491 aaKnown RBP12.56□□□□□ -0.4
Bdnf-203ENSMUST00000111043 Baz1aO88379 1555 aa12.49□□□□□ -0.41
Bdnf-203ENSMUST00000111043 Sycp2Q9CUU3 1500 aa12.45□□□□□ -0.42
Bdnf-203ENSMUST00000111043 Rtl1Q7M732 1744 aa12.35□□□□□ -0.43
Bdnf-203ENSMUST00000111043 BicraF8VPZ9 1578 aa12.23□□□□□ -0.45
Bdnf-203ENSMUST00000111043 Trim41Q5NCC3 630 aa12.21□□□□□ -0.46
Bdnf-203ENSMUST00000111043 Ccdc180J3QNE4 1664 aa12.2□□□□□ -0.46
Bdnf-203ENSMUST00000111043 Crybg2B7ZCC2 1516 aa12.17□□□□□ -0.46
Bdnf-203ENSMUST00000111043 Cecr2E9Q2Z1 1453 aa12.17□□□□□ -0.46
Bdnf-203ENSMUST00000111043 Cngb1E1AZ71 1325 aa12.15□□□□□ -0.46
Bdnf-203ENSMUST00000111043 Smarca2Q6DIC0 1577 aa12.15□□□□□ -0.46
Bdnf-203ENSMUST00000111043 Esf1Q3V1V3 845 aaKnown RBP12.14□□□□□ -0.47
Bdnf-203ENSMUST00000111043 Acin1Q9JIX8 1338 aaKnown RBP12.1□□□□□ -0.47
Bdnf-203ENSMUST00000111043 Chic1Q8CBW7 227 aa12.02□□□□□ -0.49
Bdnf-203ENSMUST00000111043 Brd4Q9ESU6 1400 aaKnown RBP11.97□□□□□ -0.49
Bdnf-203ENSMUST00000111043 DiexfQ8BTT6 772 aaKnown RBP11.92□□□□□ -0.5
Bdnf-203ENSMUST00000111043 Gab3Q8BSM5 595 aa11.91□□□□□ -0.5
Bdnf-203ENSMUST00000111043 Synj1Q8CHC4 1574 aa11.9□□□□□ -0.5
Bdnf-203ENSMUST00000111043 Ehmt2Q9Z148 1263 aaKnown RBP11.9□□□□□ -0.5
Bdnf-203ENSMUST00000111043 CftrP26361 1476 aa11.87□□□□□ -0.51
Bdnf-203ENSMUST00000111043 HrcG5E8J6 738 aa11.86□□□□□ -0.51
Bdnf-203ENSMUST00000111043 Smarca4Q3TKT4 1613 aaKnown RBP11.84□□□□□ -0.51
Bdnf-203ENSMUST00000111043 Pcgf6Q99NA9 353 aa11.82□□□□□ -0.52
Bdnf-203ENSMUST00000111043 Ube2uB1AUC4 352 aa11.81□□□□□ -0.52
Bdnf-203ENSMUST00000111043 Las1lA2BE28 776 aaKnown RBP11.81□□□□□ -0.52
Bdnf-203ENSMUST00000111043 Pds5bQ4VA53 1446 aaKnown RBP11.79□□□□□ -0.52
Bdnf-203ENSMUST00000111043 Atad2bE9Q166 1460 aaKnown RBP11.78□□□□□ -0.52
Bdnf-203ENSMUST00000111043 Iqgap2Q3UQ44 1575 aa11.76□□□□□ -0.53
Bdnf-203ENSMUST00000111043 Golga3P55937 1487 aa11.74□□□□□ -0.53
Bdnf-203ENSMUST00000111043 Il27Q8K3I6 234 aa11.74□□□□□ -0.53
Bdnf-203ENSMUST00000111043 Rsf1E9PWW9 1441 aaKnown RBP11.73□□□□□ -0.53
Bdnf-203ENSMUST00000111043 Ccdc88bQ4QRL3 1481 aa11.72□□□□□ -0.53
Bdnf-203ENSMUST00000111043 Cttnbp2B9EJA2 1648 aa11.7□□□□□ -0.54
Bdnf-203ENSMUST00000111043 Dnajc5bQ9CQ94 199 aa11.66□□□□□ -0.54
Bdnf-203ENSMUST00000111043 Ttbk1Q6PCN3 1308 aa11.66□□□□□ -0.54
Bdnf-203ENSMUST00000111043 Ercc6F8VPZ5 1481 aa11.62□□□□□ -0.55
Bdnf-203ENSMUST00000111043 Frmpd1A2AKB4 1549 aa11.61□□□□□ -0.55
Bdnf-203ENSMUST00000111043 Ubl4bQ9CQ84 188 aa11.6□□□□□ -0.55
Bdnf-203ENSMUST00000111043 Cep164Q5DU05 1446 aa11.6□□□□□ -0.55
Bdnf-203ENSMUST00000111043 Myt1lP97500 1187 aa11.57□□□□□ -0.56
Bdnf-203ENSMUST00000111043 Npm2Q80W85 207 aa11.56□□□□□ -0.56
Bdnf-203ENSMUST00000111043 Kif15Q6P9L6 1387 aa11.55□□□□□ -0.56
Bdnf-203ENSMUST00000111043 Cc2d2aQ8CFW7 1633 aa11.53□□□□□ -0.56
Bdnf-203ENSMUST00000111043 Wdr62Q3U3T8 1523 aa11.53□□□□□ -0.56
Bdnf-203ENSMUST00000111043 Top2bQ64511 1612 aa11.49□□□□□ -0.57
Bdnf-203ENSMUST00000111043 Supt5hO55201 1082 aaKnown RBP11.47□□□□□ -0.57
Bdnf-203ENSMUST00000111043 Zeb1Q64318 1117 aa11.46□□□□□ -0.57
Bdnf-203ENSMUST00000111043 Phldb1Q6PDH0 1371 aaKnown RBP11.45□□□□□ -0.58
Bdnf-203ENSMUST00000111043 Npm1Q61937 292 aaKnown RBP11.45□□□□□ -0.58
Bdnf-203ENSMUST00000111043 Fmn1Q05860 1466 aa11.44□□□□□ -0.58
Bdnf-203ENSMUST00000111043 Thoc2B1AZI6 1594 aaKnown RBP11.4□□□□□ -0.59
Bdnf-203ENSMUST00000111043 Myt1Q8CFC2 1127 aa11.39□□□□□ -0.59
Bdnf-203ENSMUST00000111043 Cux2P70298 1426 aa11.38□□□□□ -0.59
Bdnf-203ENSMUST00000111043 NefmP08553 848 aa11.38□□□□□ -0.59
Bdnf-203ENSMUST00000111043 Plppr3Q7TPB0 716 aa11.37□□□□□ -0.59
Bdnf-203ENSMUST00000111043 Amer1Q7TS75 1132 aa11.36□□□□□ -0.59
Bdnf-203ENSMUST00000111043 Neurod1Q60867 357 aa11.33□□□□□ -0.6
Bdnf-203ENSMUST00000111043 Unc13aQ4KUS2 1712 aa11.32□□□□□ -0.6
Bdnf-203ENSMUST00000111043 Ap3b1Q9Z1T1 1105 aa11.3□□□□□ -0.6
Bdnf-203ENSMUST00000111043 Top2aQ01320 1528 aaKnown RBP11.3□□□□□ -0.6
Bdnf-203ENSMUST00000111043 Rapgef2Q8CHG7 1496 aa11.29□□□□□ -0.6
Bdnf-203ENSMUST00000111043 CenpbP27790 599 aa11.29□□□□□ -0.6
Bdnf-203ENSMUST00000111043 Ccdc18Q640L5 1455 aa11.28□□□□□ -0.6
Bdnf-203ENSMUST00000111043 Lamc3Q9R0B6 1581 aa11.27□□□□□ -0.61
Bdnf-203ENSMUST00000111043 PtprkP35822 1457 aa11.27□□□□□ -0.61
Bdnf-203ENSMUST00000111043 Fam135aQ6NS59 1506 aa11.23□□□□□ -0.61
Bdnf-203ENSMUST00000111043 Wdr66E9Q743 1299 aa11.23□□□□□ -0.61
Bdnf-203ENSMUST00000111043 UbtfP25976 765 aaKnown RBP11.23□□□□□ -0.61
Bdnf-203ENSMUST00000111043 Cep162Q6ZQ06 1403 aa11.23□□□□□ -0.61
Bdnf-203ENSMUST00000111043 TnnQ80Z71 1560 aa11.21□□□□□ -0.62
Bdnf-203ENSMUST00000111043 Camsap1A2AHC3 1581 aa11.21□□□□□ -0.62
Bdnf-203ENSMUST00000111043 Plekhg3Q4VAC9 1341 aa11.2□□□□□ -0.62
Bdnf-203ENSMUST00000111043 LrpprcQ6PB66 1392 aaKnown RBP11.19□□□□□ -0.62
Bdnf-203ENSMUST00000111043 Dhx29Q6PGC1 1365 aaKnown RBP11.17□□□□□ -0.62
Bdnf-203ENSMUST00000111043 Mrc2Q64449 1479 aa11.15□□□□□ -0.62
Bdnf-203ENSMUST00000111043 Grin2bQ01097 1482 aa11.14□□□□□ -0.63
Bdnf-203ENSMUST00000111043 CatipB9EKE5 520 aa11.14□□□□□ -0.63
Bdnf-203ENSMUST00000111043 Anks4bQ8K3X6 423 aa11.13□□□□□ -0.63
Bdnf-203ENSMUST00000111043 Clip1Q922J3 1391 aa11.12□□□□□ -0.63
Bdnf-203ENSMUST00000111043 Baz1bQ9Z277 1479 aa11.12□□□□□ -0.63
Bdnf-203ENSMUST00000111043 Cdk11bP24788 784 aaKnown RBP11.11□□□□□ -0.63
Bdnf-203ENSMUST00000111043 Duox2A2AQ99 1517 aa11.1□□□□□ -0.63
Bdnf-203ENSMUST00000111043 Shroom4Q1W617 1475 aa11.1□□□□□ -0.63
Bdnf-203ENSMUST00000111043 Arhgap35Q91YM2 1499 aa11.09□□□□□ -0.63
Bdnf-203ENSMUST00000111043 Lmod2Q3UHZ5 550 aa11.09□□□□□ -0.63
Bdnf-203ENSMUST00000111043 PogzQ8BZH4 1409 aaKnown RBP11.09□□□□□ -0.63
Bdnf-203ENSMUST00000111043 Rad54l2Q99NG0 1466 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms