RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Ccer2J3QPU5 274 aa20.48■□□□□ 0.87
Shank1-203ENSMUST00000107938 Gtf3c3Q3TMP1 882 aa20.47■□□□□ 0.87
Shank1-203ENSMUST00000107938 Casc1Q6TDU8 730 aa20.43■□□□□ 0.86
Shank1-203ENSMUST00000107938 Trim30dE9PWL0 497 aa20.43■□□□□ 0.86
Shank1-203ENSMUST00000107938 RdxP26043 583 aaKnown RBP20.42■□□□□ 0.86
Shank1-203ENSMUST00000107938 Dnttip2Q8R2M2 758 aaKnown RBP20.41■□□□□ 0.86
Shank1-203ENSMUST00000107938 Gm38655A0A286YDK6 273 aa20.4■□□□□ 0.86
Shank1-203ENSMUST00000107938 Plcb2A3KGF7 1181 aa20.4■□□□□ 0.86
Shank1-203ENSMUST00000107938 Podxl2Q8CAE9 603 aa20.39■□□□□ 0.86
Shank1-203ENSMUST00000107938 Mbd3Q9Z2D8 285 aaKnown RBP20.38■□□□□ 0.85
Shank1-203ENSMUST00000107938 Cald1E9QA15 768 aaKnown RBP20.38■□□□□ 0.85
Shank1-203ENSMUST00000107938 Map7O88735 730 aa20.38■□□□□ 0.85
Shank1-203ENSMUST00000107938 Fbxo2Q80UW2 297 aa20.37■□□□□ 0.85
Shank1-203ENSMUST00000107938 Chmp4bQ9D8B3 224 aaKnown RBP20.36■□□□□ 0.85
Shank1-203ENSMUST00000107938 VgfQ0VGU4 617 aa20.35■□□□□ 0.85
Shank1-203ENSMUST00000107938 PnnO35691 725 aaKnown RBP20.32■□□□□ 0.84
Shank1-203ENSMUST00000107938 Becn1O88597 448 aa20.32■□□□□ 0.84
Shank1-203ENSMUST00000107938 Erich6bQ9D4S6 220 aa20.31■□□□□ 0.84
Shank1-203ENSMUST00000107938 Ppargc1bQ8VHJ7 1014 aa20.3■□□□□ 0.84
Shank1-203ENSMUST00000107938 Pdcl3Q8BVF2 240 aa20.29■□□□□ 0.84
Shank1-203ENSMUST00000107938 Ush1cQ9ES64 910 aa20.28■□□□□ 0.84
Shank1-203ENSMUST00000107938 Sall2Q9QX96 1004 aa20.25■□□□□ 0.83
Shank1-203ENSMUST00000107938 Vsig10D3YX43 558 aa20.24■□□□□ 0.83
Shank1-203ENSMUST00000107938 Zrsr2Q62377 462 aaKnown RBP20.24■□□□□ 0.83
Shank1-203ENSMUST00000107938 Cwc15Q9JHS9 229 aaKnown RBP20.24■□□□□ 0.83
Shank1-203ENSMUST00000107938 Hsp90b1P08113 802 aaKnown RBP20.21■□□□□ 0.83
Shank1-203ENSMUST00000107938 Fam43aQ8BUP8 424 aa20.17■□□□□ 0.82
Shank1-203ENSMUST00000107938 Trim26Q99PN3 545 aa20.17■□□□□ 0.82
Shank1-203ENSMUST00000107938 Rrp9Q91WM3 475 aaKnown RBP20.16■□□□□ 0.82
Shank1-203ENSMUST00000107938 Trim30aP15533 496 aa20.16■□□□□ 0.82
Shank1-203ENSMUST00000107938 Taok2Q6ZQ29 1240 aa20.15■□□□□ 0.82
Shank1-203ENSMUST00000107938 Ftsj3Q9DBE9 838 aaKnown RBP20.15■□□□□ 0.82
Shank1-203ENSMUST00000107938 Hmgb1P63158 215 aaKnown RBP20.13■□□□□ 0.81
Shank1-203ENSMUST00000107938 AppP12023 770 aa20.11■□□□□ 0.81
Shank1-203ENSMUST00000107938 Kiaa0754Q69ZZ9 979 aa20.11■□□□□ 0.81
Shank1-203ENSMUST00000107938 Cspp1B2RX88 1205 aa20.11■□□□□ 0.81
Shank1-203ENSMUST00000107938 Wwc2Q6NXJ0 1187 aa20.1■□□□□ 0.81
Shank1-203ENSMUST00000107938 Tcerg1Q8CGF7 1100 aaKnown RBP20.1■□□□□ 0.81
Shank1-203ENSMUST00000107938 Ipo9Q91YE6 1041 aa20.09■□□□□ 0.81
Shank1-203ENSMUST00000107938 Dnai1Q8C0M8 701 aa20.09■□□□□ 0.81
Shank1-203ENSMUST00000107938 Mapk8ip2Q9ERE9 830 aa20.08■□□□□ 0.8
Shank1-203ENSMUST00000107938 Gtf3c5Q8R2T8 520 aa20.08■□□□□ 0.8
Shank1-203ENSMUST00000107938 KnstrnQ9D9Z1 312 aaKnown RBP20.07■□□□□ 0.8
Shank1-203ENSMUST00000107938 Cep164Q5DU05 1446 aa20.07■□□□□ 0.8
Shank1-203ENSMUST00000107938 Ccdc34Q3UI66 367 aa20.07■□□□□ 0.8
Shank1-203ENSMUST00000107938 Glipr1l2Q9CQ35 332 aa20.07■□□□□ 0.8
Shank1-203ENSMUST00000107938 Sycp1Q62209 993 aa20.06■□□□□ 0.8
Shank1-203ENSMUST00000107938 Taf3Q5HZG4 932 aa20.04■□□□□ 0.8
Shank1-203ENSMUST00000107938 Mrvi1Q9WUX5 899 aaKnown RBP20.04■□□□□ 0.8
Shank1-203ENSMUST00000107938 MccE9PWI3 1003 aa20.03■□□□□ 0.8
Shank1-203ENSMUST00000107938 Chaf1aQ9QWF0 911 aa20.03■□□□□ 0.8
Shank1-203ENSMUST00000107938 Anp32eP97822 260 aaKnown RBP20.03■□□□□ 0.8
Shank1-203ENSMUST00000107938 Mrs2Q5NCE8 434 aa20■□□□□ 0.79
Shank1-203ENSMUST00000107938 Fgd1P52734 960 aa20■□□□□ 0.79
Shank1-203ENSMUST00000107938 Tpm2P58774 284 aa19.98■□□□□ 0.79
Shank1-203ENSMUST00000107938 Tpm3-rs7D3Z2H9 248 aa19.94■□□□□ 0.78
Shank1-203ENSMUST00000107938 Pes1Q9EQ61 584 aaKnown RBP19.93■□□□□ 0.78
Shank1-203ENSMUST00000107938 Dctn1O08788 1281 aa19.92■□□□□ 0.78
Shank1-203ENSMUST00000107938 Mapk8ip3Q9ESN9 1337 aa19.91■□□□□ 0.78
Shank1-203ENSMUST00000107938 Gps2Q921N8 327 aa19.89■□□□□ 0.77
Shank1-203ENSMUST00000107938 Ap3b1Q9Z1T1 1105 aa19.89■□□□□ 0.77
Shank1-203ENSMUST00000107938 Znf771Q8BJ90 317 aa19.88■□□□□ 0.77
Shank1-203ENSMUST00000107938 Ralbp1Q62172 648 aa19.87■□□□□ 0.77
Shank1-203ENSMUST00000107938 Tpm3P21107 285 aaKnown RBP19.87■□□□□ 0.77
Shank1-203ENSMUST00000107938 Pde3bQ61409 1100 aa19.87■□□□□ 0.77
Shank1-203ENSMUST00000107938 Ofd1Q80Z25 1017 aa19.87■□□□□ 0.77
Shank1-203ENSMUST00000107938 Trim55G3X8Y1 545 aa19.84■□□□□ 0.77
Shank1-203ENSMUST00000107938 R3hcc1Q8BSI6 488 aa19.83■□□□□ 0.76
Shank1-203ENSMUST00000107938 Kif3aP28741 701 aa19.82■□□□□ 0.76
Shank1-203ENSMUST00000107938 Ppm1eQ80TL0 749 aa19.81■□□□□ 0.76
Shank1-203ENSMUST00000107938 Atp6v1dP57746 247 aa19.8■□□□□ 0.76
Shank1-203ENSMUST00000107938 Zbtb7cQ8VCZ7 619 aa19.8■□□□□ 0.76
Shank1-203ENSMUST00000107938 Smarce1O54941 411 aaKnown RBP19.78■□□□□ 0.76
Shank1-203ENSMUST00000107938 Zfp777B9EKF4 885 aa19.78■□□□□ 0.76
Shank1-203ENSMUST00000107938 Mre11Q61216 706 aa19.78■□□□□ 0.76
Shank1-203ENSMUST00000107938 Zcchc6Q5BLK4 1491 aaKnown RBP19.76■□□□□ 0.75
Shank1-203ENSMUST00000107938 Rtn4Q99P72 1162 aaKnown RBP19.76■□□□□ 0.75
Shank1-203ENSMUST00000107938 Def6Q8C2K1 630 aa19.76■□□□□ 0.75
Shank1-203ENSMUST00000107938 Supt16hQ920B9 1047 aa19.76■□□□□ 0.75
Shank1-203ENSMUST00000107938 EspnQ9ET47 871 aa19.75■□□□□ 0.75
Shank1-203ENSMUST00000107938 Hap1O35668 628 aa19.74■□□□□ 0.75
Shank1-203ENSMUST00000107938 Gtf2a1Q99PM3 378 aa19.74■□□□□ 0.75
Shank1-203ENSMUST00000107938 Rsph3aQ3UFY4 516 aa19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Ccdc173A0JLY1 547 aa19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Kif3cO35066 796 aa19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Sparcl1P70663 650 aa19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Rad21Q61550 635 aaKnown RBP19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Ipo4Q8VI75 1082 aa19.72■□□□□ 0.75
Shank1-203ENSMUST00000107938 Arid4bA2CG63 1314 aaKnown RBP19.71■□□□□ 0.75
Shank1-203ENSMUST00000107938 Znhit6Q3UFB2 460 aaKnown RBP19.71■□□□□ 0.75
Shank1-203ENSMUST00000107938 HnrnpuQ8VEK3 800 aaKnown RBP19.7■□□□□ 0.74
Shank1-203ENSMUST00000107938 EzrP26040 586 aaKnown RBP19.68■□□□□ 0.74
Shank1-203ENSMUST00000107938 Dhx8A2A4P0 1244 aaKnown RBP19.68■□□□□ 0.74
Shank1-203ENSMUST00000107938 Tpm1P58771 284 aa19.68■□□□□ 0.74
Shank1-203ENSMUST00000107938 Isy1Q69ZQ2 285 aaKnown RBP19.67■□□□□ 0.74
Shank1-203ENSMUST00000107938 Cwc22Q8C5N3 908 aaKnown RBP19.66■□□□□ 0.74
Shank1-203ENSMUST00000107938 Trap1aP19473 224 aa19.65■□□□□ 0.74
Shank1-203ENSMUST00000107938 Clip1Q922J3 1391 aa19.65■□□□□ 0.74
Shank1-203ENSMUST00000107938 Rufy1Q8BIJ7 712 aa19.64■□□□□ 0.74
Shank1-203ENSMUST00000107938 Paf1Q8K2T8 535 aa19.64■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms