RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Ccer2J3QPU5 274 aa20.48■□□□□ 0.87
Shank1-203ENSMUST00000107938 Gtf3c3Q3TMP1 882 aa20.47■□□□□ 0.87
Shank1-203ENSMUST00000107938 Casc1Q6TDU8 730 aa20.43■□□□□ 0.86
Shank1-203ENSMUST00000107938 Trim30dE9PWL0 497 aa20.43■□□□□ 0.86
Shank1-203ENSMUST00000107938 RdxP26043 583 aaKnown RBP20.42■□□□□ 0.86
Shank1-203ENSMUST00000107938 Dnttip2Q8R2M2 758 aaKnown RBP20.41■□□□□ 0.86
Shank1-203ENSMUST00000107938 Gm38655A0A286YDK6 273 aa20.4■□□□□ 0.86
Shank1-203ENSMUST00000107938 Plcb2A3KGF7 1181 aa20.4■□□□□ 0.86
Shank1-203ENSMUST00000107938 Podxl2Q8CAE9 603 aa20.39■□□□□ 0.86
Shank1-203ENSMUST00000107938 Mbd3Q9Z2D8 285 aaKnown RBP20.38■□□□□ 0.85
Shank1-203ENSMUST00000107938 Cald1E9QA15 768 aaKnown RBP20.38■□□□□ 0.85
Shank1-203ENSMUST00000107938 Map7O88735 730 aa20.38■□□□□ 0.85
Shank1-203ENSMUST00000107938 Fbxo2Q80UW2 297 aa20.37■□□□□ 0.85
Shank1-203ENSMUST00000107938 Chmp4bQ9D8B3 224 aaKnown RBP20.36■□□□□ 0.85
Shank1-203ENSMUST00000107938 VgfQ0VGU4 617 aa20.35■□□□□ 0.85
Shank1-203ENSMUST00000107938 PnnO35691 725 aaKnown RBP20.32■□□□□ 0.84
Shank1-203ENSMUST00000107938 Becn1O88597 448 aa20.32■□□□□ 0.84
Shank1-203ENSMUST00000107938 Erich6bQ9D4S6 220 aa20.31■□□□□ 0.84
Shank1-203ENSMUST00000107938 Ppargc1bQ8VHJ7 1014 aa20.3■□□□□ 0.84
Shank1-203ENSMUST00000107938 Pdcl3Q8BVF2 240 aa20.29■□□□□ 0.84
Shank1-203ENSMUST00000107938 Ush1cQ9ES64 910 aa20.28■□□□□ 0.84
Shank1-203ENSMUST00000107938 Sall2Q9QX96 1004 aa20.25■□□□□ 0.83
Shank1-203ENSMUST00000107938 Vsig10D3YX43 558 aa20.24■□□□□ 0.83
Shank1-203ENSMUST00000107938 Zrsr2Q62377 462 aaKnown RBP20.24■□□□□ 0.83
Shank1-203ENSMUST00000107938 Cwc15Q9JHS9 229 aaKnown RBP20.24■□□□□ 0.83
Shank1-203ENSMUST00000107938 Hsp90b1P08113 802 aaKnown RBP20.21■□□□□ 0.83
Shank1-203ENSMUST00000107938 Fam43aQ8BUP8 424 aa20.17■□□□□ 0.82
Shank1-203ENSMUST00000107938 Trim26Q99PN3 545 aa20.17■□□□□ 0.82
Shank1-203ENSMUST00000107938 Rrp9Q91WM3 475 aaKnown RBP20.16■□□□□ 0.82
Shank1-203ENSMUST00000107938 Trim30aP15533 496 aa20.16■□□□□ 0.82
Shank1-203ENSMUST00000107938 Taok2Q6ZQ29 1240 aa20.15■□□□□ 0.82
Shank1-203ENSMUST00000107938 Ftsj3Q9DBE9 838 aaKnown RBP20.15■□□□□ 0.82
Shank1-203ENSMUST00000107938 Hmgb1P63158 215 aaKnown RBP20.13■□□□□ 0.81
Shank1-203ENSMUST00000107938 AppP12023 770 aa20.11■□□□□ 0.81
Shank1-203ENSMUST00000107938 Kiaa0754Q69ZZ9 979 aa20.11■□□□□ 0.81
Shank1-203ENSMUST00000107938 Cspp1B2RX88 1205 aa20.11■□□□□ 0.81
Shank1-203ENSMUST00000107938 Wwc2Q6NXJ0 1187 aa20.1■□□□□ 0.81
Shank1-203ENSMUST00000107938 Tcerg1Q8CGF7 1100 aaKnown RBP20.1■□□□□ 0.81
Shank1-203ENSMUST00000107938 Ipo9Q91YE6 1041 aa20.09■□□□□ 0.81
Shank1-203ENSMUST00000107938 Dnai1Q8C0M8 701 aa20.09■□□□□ 0.81
Shank1-203ENSMUST00000107938 Mapk8ip2Q9ERE9 830 aa20.08■□□□□ 0.8
Shank1-203ENSMUST00000107938 Gtf3c5Q8R2T8 520 aa20.08■□□□□ 0.8
Shank1-203ENSMUST00000107938 KnstrnQ9D9Z1 312 aaKnown RBP20.07■□□□□ 0.8
Shank1-203ENSMUST00000107938 Cep164Q5DU05 1446 aa20.07■□□□□ 0.8
Shank1-203ENSMUST00000107938 Ccdc34Q3UI66 367 aa20.07■□□□□ 0.8
Shank1-203ENSMUST00000107938 Glipr1l2Q9CQ35 332 aa20.07■□□□□ 0.8
Shank1-203ENSMUST00000107938 Sycp1Q62209 993 aa20.06■□□□□ 0.8
Shank1-203ENSMUST00000107938 Taf3Q5HZG4 932 aa20.04■□□□□ 0.8
Shank1-203ENSMUST00000107938 Mrvi1Q9WUX5 899 aaKnown RBP20.04■□□□□ 0.8
Shank1-203ENSMUST00000107938 MccE9PWI3 1003 aa20.03■□□□□ 0.8
Shank1-203ENSMUST00000107938 Chaf1aQ9QWF0 911 aa20.03■□□□□ 0.8
Shank1-203ENSMUST00000107938 Anp32eP97822 260 aaKnown RBP20.03■□□□□ 0.8
Shank1-203ENSMUST00000107938 Mrs2Q5NCE8 434 aa20■□□□□ 0.79
Shank1-203ENSMUST00000107938 Fgd1P52734 960 aa20■□□□□ 0.79
Shank1-203ENSMUST00000107938 Tpm2P58774 284 aa19.98■□□□□ 0.79
Shank1-203ENSMUST00000107938 Tpm3-rs7D3Z2H9 248 aa19.94■□□□□ 0.78
Shank1-203ENSMUST00000107938 Pes1Q9EQ61 584 aaKnown RBP19.93■□□□□ 0.78
Shank1-203ENSMUST00000107938 Dctn1O08788 1281 aa19.92■□□□□ 0.78
Shank1-203ENSMUST00000107938 Mapk8ip3Q9ESN9 1337 aa19.91■□□□□ 0.78
Shank1-203ENSMUST00000107938 Gps2Q921N8 327 aa19.89■□□□□ 0.77
Shank1-203ENSMUST00000107938 Ap3b1Q9Z1T1 1105 aa19.89■□□□□ 0.77
Shank1-203ENSMUST00000107938 Znf771Q8BJ90 317 aa19.88■□□□□ 0.77
Shank1-203ENSMUST00000107938 Ralbp1Q62172 648 aa19.87■□□□□ 0.77
Shank1-203ENSMUST00000107938 Tpm3P21107 285 aaKnown RBP19.87■□□□□ 0.77
Shank1-203ENSMUST00000107938 Pde3bQ61409 1100 aa19.87■□□□□ 0.77
Shank1-203ENSMUST00000107938 Ofd1Q80Z25 1017 aa19.87■□□□□ 0.77
Shank1-203ENSMUST00000107938 Trim55G3X8Y1 545 aa19.84■□□□□ 0.77
Shank1-203ENSMUST00000107938 R3hcc1Q8BSI6 488 aa19.83■□□□□ 0.76
Shank1-203ENSMUST00000107938 Kif3aP28741 701 aa19.82■□□□□ 0.76
Shank1-203ENSMUST00000107938 Ppm1eQ80TL0 749 aa19.81■□□□□ 0.76
Shank1-203ENSMUST00000107938 Atp6v1dP57746 247 aa19.8■□□□□ 0.76
Shank1-203ENSMUST00000107938 Zbtb7cQ8VCZ7 619 aa19.8■□□□□ 0.76
Shank1-203ENSMUST00000107938 Smarce1O54941 411 aaKnown RBP19.78■□□□□ 0.76
Shank1-203ENSMUST00000107938 Zfp777B9EKF4 885 aa19.78■□□□□ 0.76
Shank1-203ENSMUST00000107938 Mre11Q61216 706 aa19.78■□□□□ 0.76
Shank1-203ENSMUST00000107938 Zcchc6Q5BLK4 1491 aaKnown RBP19.76■□□□□ 0.75
Shank1-203ENSMUST00000107938 Rtn4Q99P72 1162 aaKnown RBP19.76■□□□□ 0.75
Shank1-203ENSMUST00000107938 Def6Q8C2K1 630 aa19.76■□□□□ 0.75
Shank1-203ENSMUST00000107938 Supt16hQ920B9 1047 aa19.76■□□□□ 0.75
Shank1-203ENSMUST00000107938 EspnQ9ET47 871 aa19.75■□□□□ 0.75
Shank1-203ENSMUST00000107938 Hap1O35668 628 aa19.74■□□□□ 0.75
Shank1-203ENSMUST00000107938 Gtf2a1Q99PM3 378 aa19.74■□□□□ 0.75
Shank1-203ENSMUST00000107938 Rsph3aQ3UFY4 516 aa19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Ccdc173A0JLY1 547 aa19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Kif3cO35066 796 aa19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Sparcl1P70663 650 aa19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Rad21Q61550 635 aaKnown RBP19.73■□□□□ 0.75
Shank1-203ENSMUST00000107938 Ipo4Q8VI75 1082 aa19.72■□□□□ 0.75
Shank1-203ENSMUST00000107938 Arid4bA2CG63 1314 aaKnown RBP19.71■□□□□ 0.75
Shank1-203ENSMUST00000107938 Znhit6Q3UFB2 460 aaKnown RBP19.71■□□□□ 0.75
Shank1-203ENSMUST00000107938 HnrnpuQ8VEK3 800 aaKnown RBP19.7■□□□□ 0.74
Shank1-203ENSMUST00000107938 EzrP26040 586 aaKnown RBP19.68■□□□□ 0.74
Shank1-203ENSMUST00000107938 Dhx8A2A4P0 1244 aaKnown RBP19.68■□□□□ 0.74
Shank1-203ENSMUST00000107938 Tpm1P58771 284 aa19.68■□□□□ 0.74
Shank1-203ENSMUST00000107938 Isy1Q69ZQ2 285 aaKnown RBP19.67■□□□□ 0.74
Shank1-203ENSMUST00000107938 Cwc22Q8C5N3 908 aaKnown RBP19.66■□□□□ 0.74
Shank1-203ENSMUST00000107938 Trap1aP19473 224 aa19.65■□□□□ 0.74
Shank1-203ENSMUST00000107938 Clip1Q922J3 1391 aa19.65■□□□□ 0.74
Shank1-203ENSMUST00000107938 Rufy1Q8BIJ7 712 aa19.64■□□□□ 0.74
Shank1-203ENSMUST00000107938 Paf1Q8K2T8 535 aa19.64■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms