RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Rpgrip1Q9EPQ2 1331 aa27.12■■□□□ 1.93
Shank1-203ENSMUST00000107938 Cngb1E1AZ71 1325 aa26.85■■□□□ 1.89
Shank1-203ENSMUST00000107938 Las1lA2BE28 776 aaKnown RBP26.78■■□□□ 1.88
Shank1-203ENSMUST00000107938 Pelp1Q9DBD5 1123 aaKnown RBP26.35■■□□□ 1.81
Shank1-203ENSMUST00000107938 Myt1Q8CFC2 1127 aa25.49■■□□□ 1.67
Shank1-203ENSMUST00000107938 Amer1Q7TS75 1132 aa25.19■■□□□ 1.62
Shank1-203ENSMUST00000107938 Wdr66E9Q743 1299 aa25.15■■□□□ 1.62
Shank1-203ENSMUST00000107938 Rhox8Q6VSS7 320 aa25.02■■□□□ 1.6
Shank1-203ENSMUST00000107938 4930567H17RikQ3V0K5 233 aa24.9■■□□□ 1.58
Shank1-203ENSMUST00000107938 CenpbP27790 599 aa24.87■■□□□ 1.57
Shank1-203ENSMUST00000107938 Rtl1Q7M732 1744 aa24.26■■□□□ 1.47
Shank1-203ENSMUST00000107938 Stra8P70278 393 aa24.13■■□□□ 1.45
Shank1-203ENSMUST00000107938 Rtl5Q5DTT4 599 aa23.88■■□□□ 1.41
Shank1-203ENSMUST00000107938 DiexfQ8BTT6 772 aaKnown RBP23.79■■□□□ 1.4
Shank1-203ENSMUST00000107938 Ccdc180J3QNE4 1664 aa23.48■■□□□ 1.35
Shank1-203ENSMUST00000107938 Ythdc1E9Q5K9 736 aaKnown RBP23.47■■□□□ 1.35
Shank1-203ENSMUST00000107938 Tnnt3Q9QZ47 272 aa23.44■■□□□ 1.34
Shank1-203ENSMUST00000107938 Acin1Q9JIX8 1338 aaKnown RBP23.43■■□□□ 1.34
Shank1-203ENSMUST00000107938 Zeb1Q64318 1117 aa23.42■■□□□ 1.34
Shank1-203ENSMUST00000107938 4933416C03RikQ3V063 378 aa23.38■■□□□ 1.33
Shank1-203ENSMUST00000107938 NefmP08553 848 aa23.36■■□□□ 1.33
Shank1-203ENSMUST00000107938 Ttbk1Q6PCN3 1308 aa23.33■■□□□ 1.33
Shank1-203ENSMUST00000107938 Ehmt2Q9Z148 1263 aaKnown RBP23.04■■□□□ 1.28
Shank1-203ENSMUST00000107938 Cdk11bP24788 784 aaKnown RBP22.94■■□□□ 1.26
Shank1-203ENSMUST00000107938 NeflP08551 543 aa22.9■■□□□ 1.26
Shank1-203ENSMUST00000107938 Ccdc9Q8VC31 543 aaKnown RBP22.84■■□□□ 1.25
Shank1-203ENSMUST00000107938 Ube2uB1AUC4 352 aa22.73■■□□□ 1.23
Shank1-203ENSMUST00000107938 Pcgf6Q99NA9 353 aa22.53■■□□□ 1.2
Shank1-203ENSMUST00000107938 Anp32bQ9EST5 272 aaKnown RBP22.49■■□□□ 1.19
Shank1-203ENSMUST00000107938 HrcG5E8J6 738 aa22.46■■□□□ 1.19
Shank1-203ENSMUST00000107938 Anp32aO35381 247 aa22.42■■□□□ 1.18
Shank1-203ENSMUST00000107938 Nop58Q6DFW4 536 aaKnown RBP22.4■■□□□ 1.18
Shank1-203ENSMUST00000107938 NrdcQ8BHG1 1161 aa22.36■■□□□ 1.17
Shank1-203ENSMUST00000107938 Neurod1Q60867 357 aa22.35■■□□□ 1.17
Shank1-203ENSMUST00000107938 Myt1lP97500 1187 aa22.27■■□□□ 1.16
Shank1-203ENSMUST00000107938 DaxxO35613 739 aa22.2■■□□□ 1.14
Shank1-203ENSMUST00000107938 CatipB9EKE5 520 aa22.12■■□□□ 1.13
Shank1-203ENSMUST00000107938 Slc24a1Q91WD8 1130 aa22.1■■□□□ 1.13
Shank1-203ENSMUST00000107938 Trim41Q5NCC3 630 aa22.05■■□□□ 1.12
Shank1-203ENSMUST00000107938 Aplp2Q06335 707 aa21.99■■□□□ 1.11
Shank1-203ENSMUST00000107938 Npm2Q80W85 207 aa21.85■■□□□ 1.09
Shank1-203ENSMUST00000107938 Esf1Q3V1V3 845 aaKnown RBP21.76■■□□□ 1.07
Shank1-203ENSMUST00000107938 Upf2A2AT37 1269 aaKnown RBP21.75■■□□□ 1.07
Shank1-203ENSMUST00000107938 Hsp90aa1P07901 733 aaKnown RBP21.69■■□□□ 1.06
Shank1-203ENSMUST00000107938 Polr3glQ8R0C0 218 aa21.68■■□□□ 1.06
Shank1-203ENSMUST00000107938 Anks4bQ8K3X6 423 aa21.67■■□□□ 1.06
Shank1-203ENSMUST00000107938 ClspnQ80YR7 1315 aa21.67■■□□□ 1.06
Shank1-203ENSMUST00000107938 Adam1bQ8R534 806 aa21.6■■□□□ 1.05
Shank1-203ENSMUST00000107938 Supt5hO55201 1082 aaKnown RBP21.59■■□□□ 1.05
Shank1-203ENSMUST00000107938 Eif5bQ05D44 1216 aaKnown RBP21.58■■□□□ 1.05
Shank1-203ENSMUST00000107938 NclP09405 707 aaKnown RBP21.58■■□□□ 1.05
Shank1-203ENSMUST00000107938 Tnnt2P50752 301 aa21.56■■□□□ 1.04
Shank1-203ENSMUST00000107938 Gab3Q8BSM5 595 aa21.56■■□□□ 1.04
Shank1-203ENSMUST00000107938 UbtfP25976 765 aaKnown RBP21.55■■□□□ 1.04
Shank1-203ENSMUST00000107938 TonslQ6NZL6 1363 aa21.53■■□□□ 1.04
Shank1-203ENSMUST00000107938 Ccdc136Q3TVA9 1136 aa21.53■■□□□ 1.04
Shank1-203ENSMUST00000107938 Trim44Q9QXA7 346 aa21.49■■□□□ 1.03
Shank1-203ENSMUST00000107938 Bcl11aQ9QYE3 773 aa21.47■■□□□ 1.03
Shank1-203ENSMUST00000107938 Irx3P81067 507 aa21.35■■□□□ 1.01
Shank1-203ENSMUST00000107938 Ccdc27Q3V036 639 aa21.35■■□□□ 1.01
Shank1-203ENSMUST00000107938 Lmod3E9QA62 571 aa21.32■■□□□ 1
Shank1-203ENSMUST00000107938 Znf326O88291 580 aa21.24■□□□□ 0.99
Shank1-203ENSMUST00000107938 Htatsf1Q8BGC0 757 aa21.21■□□□□ 0.99
Shank1-203ENSMUST00000107938 Rangap1P46061 589 aaKnown RBP21.17■□□□□ 0.98
Shank1-203ENSMUST00000107938 Map7d2A2AG50 781 aa21.15■□□□□ 0.98
Shank1-203ENSMUST00000107938 Csrnp3P59055 597 aa21.14■□□□□ 0.97
Shank1-203ENSMUST00000107938 Calcoco2A2A6M5 331 aa21.13■□□□□ 0.97
Shank1-203ENSMUST00000107938 AU015836B2RUM3 263 aa21.09■□□□□ 0.97
Shank1-203ENSMUST00000107938 Wdr43Q6ZQL4 677 aaKnown RBP21.06■□□□□ 0.96
Shank1-203ENSMUST00000107938 Calr4Q3TQS0 420 aa21.05■□□□□ 0.96
Shank1-203ENSMUST00000107938 NischQ80TM9 1593 aa21.04■□□□□ 0.96
Shank1-203ENSMUST00000107938 Q8BT18 775 aa20.98■□□□□ 0.95
Shank1-203ENSMUST00000107938 DekQ7TNV0 380 aaKnown RBP20.97■□□□□ 0.95
Shank1-203ENSMUST00000107938 Znf316Q6PGE4 1016 aa20.96■□□□□ 0.95
Shank1-203ENSMUST00000107938 Dcaf1Q80TR8 1506 aa20.95■□□□□ 0.94
Shank1-203ENSMUST00000107938 SetQ9EQU5 289 aaKnown RBP20.93■□□□□ 0.94
Shank1-203ENSMUST00000107938 Pknox2Q8BG99 474 aa20.91■□□□□ 0.94
Shank1-203ENSMUST00000107938 4933402E13RikQ9D4D2 429 aa20.88■□□□□ 0.93
Shank1-203ENSMUST00000107938 MsnP26041 577 aaKnown RBP20.86■□□□□ 0.93
Shank1-203ENSMUST00000107938 Fam50aQ9WV03 339 aaKnown RBP20.84■□□□□ 0.93
Shank1-203ENSMUST00000107938 Hdac5Q9Z2V6 1113 aa20.83■□□□□ 0.93
Shank1-203ENSMUST00000107938 Ppp4r2Q0VGB7 417 aa20.83■□□□□ 0.92
Shank1-203ENSMUST00000107938 BccipQ9CWI3 316 aa20.82■□□□□ 0.92
Shank1-203ENSMUST00000107938 PtmaP26350 111 aa20.82■□□□□ 0.92
Shank1-203ENSMUST00000107938 CalrP14211 416 aaKnown RBP20.82■□□□□ 0.92
Shank1-203ENSMUST00000107938 Os9Q8K2C7 672 aa20.79■□□□□ 0.92
Shank1-203ENSMUST00000107938 Ppm1gQ61074 542 aa20.76■□□□□ 0.91
Shank1-203ENSMUST00000107938 CanxP35564 591 aaKnown RBP20.76■□□□□ 0.91
Shank1-203ENSMUST00000107938 Mak16Q8BGS0 296 aaKnown RBP20.74■□□□□ 0.91
Shank1-203ENSMUST00000107938 Dusp9Q7TNL7 452 aa20.69■□□□□ 0.9
Shank1-203ENSMUST00000107938 1700123L14RikQ3V2K7 440 aa20.69■□□□□ 0.9
Shank1-203ENSMUST00000107938 PtmsQ9D0J8 101 aaKnown RBP20.67■□□□□ 0.9
Shank1-203ENSMUST00000107938 Nlrp6Q91WS2 869 aa20.67■□□□□ 0.9
Shank1-203ENSMUST00000107938 Rrp12Q6P5B0 1295 aaKnown RBP20.66■□□□□ 0.9
Shank1-203ENSMUST00000107938 Hsp90ab1P11499 724 aaKnown RBP20.66■□□□□ 0.9
Shank1-203ENSMUST00000107938 Gm973E9Q295 1059 aa20.64■□□□□ 0.9
Shank1-203ENSMUST00000107938 Mier1Q5UAK0 511 aa20.63■□□□□ 0.89
Shank1-203ENSMUST00000107938 Fam71e1A1L3C1 212 aa20.61■□□□□ 0.89
Shank1-203ENSMUST00000107938 ArxO35085 564 aa20.56■□□□□ 0.88
Shank1-203ENSMUST00000107938 Ddrgk1Q80WW9 315 aa20.54■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms