RNA–Protein interactions for RNA: ENSMUST00000107343.7

Chtop-205, Transcript of Chromatin target of PRMT1 protein, mousemouse

TSL 1 (best) BASIC

Gene Chtop, Length 3,118 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chtop-205ENSMUST00000107343 Hsp90aa1P07901 733 aaKnown RBP19.68■□□□□ 0.74
Chtop-205ENSMUST00000107343 Synj1Q8CHC4 1574 aa19.68■□□□□ 0.74
Chtop-205ENSMUST00000107343 Ipo9Q91YE6 1041 aa19.62■□□□□ 0.73
Chtop-205ENSMUST00000107343 Eid3Q3V124 375 aa19.6■□□□□ 0.73
Chtop-205ENSMUST00000107343 TchhA0A0B4J1F9 1599 aa19.59■□□□□ 0.73
Chtop-205ENSMUST00000107343 Clip1Q922J3 1391 aa19.58■□□□□ 0.73
Chtop-205ENSMUST00000107343 UacaQ8CGB3 1411 aa19.57■□□□□ 0.72
Chtop-205ENSMUST00000107343 Eif4g1Q6NZJ6 1600 aaKnown RBP19.57■□□□□ 0.72
Chtop-205ENSMUST00000107343 Top2aQ01320 1528 aaKnown RBP19.56■□□□□ 0.72
Chtop-205ENSMUST00000107343 Plekhg3Q4VAC9 1341 aa19.55■□□□□ 0.72
Chtop-205ENSMUST00000107343 Cc2d2aQ8CFW7 1633 aa19.54■□□□□ 0.72
Chtop-205ENSMUST00000107343 Smg6P61406 1418 aaKnown RBP19.53■□□□□ 0.72
Chtop-205ENSMUST00000107343 Gm13697A2AK42 830 aa19.52■□□□□ 0.72
Chtop-205ENSMUST00000107343 Kcnn1Q9EQR3 537 aa19.51■□□□□ 0.71
Chtop-205ENSMUST00000107343 Baz1bQ9Z277 1479 aa19.48■□□□□ 0.71
Chtop-205ENSMUST00000107343 Ccer2J3QPU5 274 aa19.47■□□□□ 0.71
Chtop-205ENSMUST00000107343 Myt1lP97500 1187 aa19.44■□□□□ 0.7
Chtop-205ENSMUST00000107343 Iqcf3Q9D498 203 aa19.43■□□□□ 0.7
Chtop-205ENSMUST00000107343 Esf1Q3V1V3 845 aaKnown RBP19.43■□□□□ 0.7
Chtop-205ENSMUST00000107343 CftrP26361 1476 aa19.43■□□□□ 0.7
Chtop-205ENSMUST00000107343 NclP09405 707 aaKnown RBP19.41■□□□□ 0.7
Chtop-205ENSMUST00000107343 Ncoa2Q61026 1462 aa19.4■□□□□ 0.7
Chtop-205ENSMUST00000107343 Camsap2Q8C1B1 1461 aa19.4■□□□□ 0.7
Chtop-205ENSMUST00000107343 Fmn1Q05860 1466 aa19.38■□□□□ 0.69
Chtop-205ENSMUST00000107343 Ccdc18Q640L5 1455 aa19.34■□□□□ 0.69
Chtop-205ENSMUST00000107343 Smarca4Q3TKT4 1613 aaKnown RBP19.31■□□□□ 0.68
Chtop-205ENSMUST00000107343 Tcerg1Q8CGF7 1100 aaKnown RBP19.3■□□□□ 0.68
Chtop-205ENSMUST00000107343 Arap1Q4LDD4 1452 aa19.29■□□□□ 0.68
Chtop-205ENSMUST00000107343 Pdcl3Q8BVF2 240 aa19.29■□□□□ 0.68
Chtop-205ENSMUST00000107343 Eif5bQ05D44 1216 aaKnown RBP19.29■□□□□ 0.68
Chtop-205ENSMUST00000107343 Cttnbp2B9EJA2 1648 aa19.28■□□□□ 0.68
Chtop-205ENSMUST00000107343 Arhgef5E9Q7D5 1581 aa19.27■□□□□ 0.68
Chtop-205ENSMUST00000107343 Ankrd36D3Z4K0 1415 aa19.27■□□□□ 0.67
Chtop-205ENSMUST00000107343 Eea1Q8BL66 1411 aa19.26■□□□□ 0.67
Chtop-205ENSMUST00000107343 4933416C03RikQ3V063 378 aa19.26■□□□□ 0.67
Chtop-205ENSMUST00000107343 Slc24a1Q91WD8 1130 aa19.25■□□□□ 0.67
Chtop-205ENSMUST00000107343 Pds5bQ4VA53 1446 aaKnown RBP19.25■□□□□ 0.67
Chtop-205ENSMUST00000107343 Sin3aQ60520 1274 aaKnown RBP19.23■□□□□ 0.67
Chtop-205ENSMUST00000107343 Atad2bE9Q166 1460 aaKnown RBP19.22■□□□□ 0.67
Chtop-205ENSMUST00000107343 NeflP08551 543 aa19.2■□□□□ 0.66
Chtop-205ENSMUST00000107343 Slc4a3P16283 1227 aa19.2■□□□□ 0.66
Chtop-205ENSMUST00000107343 DaxxO35613 739 aa19.18■□□□□ 0.66
Chtop-205ENSMUST00000107343 Gtf2a1Q99PM3 378 aa19.18■□□□□ 0.66
Chtop-205ENSMUST00000107343 AampJ3QN89 436 aa19.18■□□□□ 0.66
Chtop-205ENSMUST00000107343 Arhgap27A2AB59 869 aa19.17■□□□□ 0.66
Chtop-205ENSMUST00000107343 Iqgap2Q3UQ44 1575 aa19.17■□□□□ 0.66
Chtop-205ENSMUST00000107343 Slc4a2P13808 1237 aaKnown RBP19.15■□□□□ 0.66
Chtop-205ENSMUST00000107343 P3h3Q8CG70 732 aa19.14■□□□□ 0.66
Chtop-205ENSMUST00000107343 Tiam1Q60610 1591 aa19.13■□□□□ 0.65
Chtop-205ENSMUST00000107343 Pprc1Q6NZN1 1644 aa19.12■□□□□ 0.65
Chtop-205ENSMUST00000107343 Fyco1Q8VDC1 1437 aa19.12■□□□□ 0.65
Chtop-205ENSMUST00000107343 Npm2Q80W85 207 aa19.11■□□□□ 0.65
Chtop-205ENSMUST00000107343 Mink1Q9JM52 1308 aa19.11■□□□□ 0.65
Chtop-205ENSMUST00000107343 Hspa5P20029 655 aaKnown RBP19.11■□□□□ 0.65
Chtop-205ENSMUST00000107343 Arhgap35Q91YM2 1499 aa19.1■□□□□ 0.65
Chtop-205ENSMUST00000107343 Zfp777B9EKF4 885 aa19.08■□□□□ 0.64
Chtop-205ENSMUST00000107343 ChgaP26339 463 aaKnown RBP19.07■□□□□ 0.64
Chtop-205ENSMUST00000107343 Mrs2Q5NCE8 434 aa19.07■□□□□ 0.64
Chtop-205ENSMUST00000107343 Dhx29Q6PGC1 1365 aaKnown RBP19.07■□□□□ 0.64
Chtop-205ENSMUST00000107343 Pdlim2Q8R1G6 349 aa19.05■□□□□ 0.64
Chtop-205ENSMUST00000107343 Naip5Q9R016 1403 aa19.05■□□□□ 0.64
Chtop-205ENSMUST00000107343 Gm13695A2AK44 830 aa19.05■□□□□ 0.64
Chtop-205ENSMUST00000107343 Rrp9Q91WM3 475 aaKnown RBP19.05■□□□□ 0.64
Chtop-205ENSMUST00000107343 EprsQ8CGC7 1512 aaKnown RBP19.04■□□□□ 0.64
Chtop-205ENSMUST00000107343 Fhad1A6PWD2 1420 aa19.04■□□□□ 0.64
Chtop-205ENSMUST00000107343 DmtnQ9WV69 405 aa19.02■□□□□ 0.63
Chtop-205ENSMUST00000107343 Dnajc5bQ9CQ94 199 aa19.01■□□□□ 0.63
Chtop-205ENSMUST00000107343 Kcnh8P59111 1102 aa19.01■□□□□ 0.63
Chtop-205ENSMUST00000107343 Nkx1-2P42580 305 aa19■□□□□ 0.63
Chtop-205ENSMUST00000107343 PnisrA2AJT4 805 aaKnown RBP18.99■□□□□ 0.63
Chtop-205ENSMUST00000107343 Rtn4Q99P72 1162 aaKnown RBP18.98■□□□□ 0.63
Chtop-205ENSMUST00000107343 NgefQ8CHT1 710 aa18.97■□□□□ 0.63
Chtop-205ENSMUST00000107343 Thoc2B1AZI6 1594 aaKnown RBP18.97■□□□□ 0.63
Chtop-205ENSMUST00000107343 Naip1Q9QWK5 1403 aa18.96■□□□□ 0.63
Chtop-205ENSMUST00000107343 Dnttip2Q8R2M2 758 aaKnown RBP18.96■□□□□ 0.63
Chtop-205ENSMUST00000107343 AU015836B2RUM3 263 aa18.96■□□□□ 0.63
Chtop-205ENSMUST00000107343 Cul7Q8VE73 1689 aa18.95■□□□□ 0.62
Chtop-205ENSMUST00000107343 Vps8Q0P5W1 1427 aa18.95■□□□□ 0.62
Chtop-205ENSMUST00000107343 L3mbtl2P59178 703 aa18.95■□□□□ 0.62
Chtop-205ENSMUST00000107343 Setd5Q5XJV7 1441 aa18.95■□□□□ 0.62
Chtop-205ENSMUST00000107343 Ncoa1P70365 1447 aa18.95■□□□□ 0.62
Chtop-205ENSMUST00000107343 Frmpd1A2AKB4 1549 aa18.94■□□□□ 0.62
Chtop-205ENSMUST00000107343 Mia2Q91ZV0 1396 aa18.94■□□□□ 0.62
Chtop-205ENSMUST00000107343 NrkQ9R0G8 1455 aa18.94■□□□□ 0.62
Chtop-205ENSMUST00000107343 Crocc2F6XLV1 1638 aa18.93■□□□□ 0.62
Chtop-205ENSMUST00000107343 Exoc6Q8R313 802 aa18.92■□□□□ 0.62
Chtop-205ENSMUST00000107343 Efcab5A0JP43 1406 aa18.92■□□□□ 0.62
Chtop-205ENSMUST00000107343 Mre11Q61216 706 aa18.91■□□□□ 0.62
Chtop-205ENSMUST00000107343 Ercc6F8VPZ5 1481 aa18.91■□□□□ 0.62
Chtop-205ENSMUST00000107343 Erich3F6QRE9 1637 aa18.91■□□□□ 0.62
Chtop-205ENSMUST00000107343 Wwc2Q6NXJ0 1187 aa18.9■□□□□ 0.62
Chtop-205ENSMUST00000107343 TnikP83510 1323 aa18.9■□□□□ 0.62
Chtop-205ENSMUST00000107343 Camsap1A2AHC3 1581 aa18.88■□□□□ 0.61
Chtop-205ENSMUST00000107343 3425401B19RikD3Z1D3 1412 aa18.87■□□□□ 0.61
Chtop-205ENSMUST00000107343 Wdr62Q3U3T8 1523 aa18.87■□□□□ 0.61
Chtop-205ENSMUST00000107343 Ofd1Q80Z25 1017 aa18.86■□□□□ 0.61
Chtop-205ENSMUST00000107343 AqrQ8CFQ3 1481 aaKnown RBP18.86■□□□□ 0.61
Chtop-205ENSMUST00000107343 Sart3Q9JLI8 962 aaKnown RBP18.85■□□□□ 0.61
Chtop-205ENSMUST00000107343 Fam50aQ9WV03 339 aaKnown RBP18.85■□□□□ 0.61
Chtop-205ENSMUST00000107343 Kank1E9Q238 1360 aa18.84■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms