RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Ythdc2B2RR83 1445 aaKnown RBP31.03■■■□□ 2.56
Usf3-201ENSMUST00000088356 Chd1P40201 1711 aa31■■■□□ 2.55
Usf3-201ENSMUST00000088356 Top2aQ01320 1528 aaKnown RBP30.89■■■□□ 2.54
Usf3-201ENSMUST00000088356 Setbp1Q9Z180 1582 aa30.88■■■□□ 2.53
Usf3-201ENSMUST00000088356 Pla2r1Q62028 1487 aa30.85■■■□□ 2.53
Usf3-201ENSMUST00000088356 CadpsQ80TJ1 1355 aa30.84■■■□□ 2.53
Usf3-201ENSMUST00000088356 Gpatch8A2A6A1 1505 aa30.83■■■□□ 2.53
Usf3-201ENSMUST00000088356 Dnmt1P13864 1620 aaKnown RBP30.76■■■□□ 2.52
Usf3-201ENSMUST00000088356 Soga1E1U8D0 1418 aa30.75■■■□□ 2.51
Usf3-201ENSMUST00000088356 Ak9G3UYQ4 1894 aa30.75■■■□□ 2.51
Usf3-201ENSMUST00000088356 Ppp1r18Q8BQ30 594 aa30.74■■■□□ 2.51
Usf3-201ENSMUST00000088356 Plekhg3Q4VAC9 1341 aa30.7■■■□□ 2.5
Usf3-201ENSMUST00000088356 BC005561E9Q5E2 1589 aa30.69■■■□□ 2.5
Usf3-201ENSMUST00000088356 Neo1P97798 1493 aa30.69■■■□□ 2.5
Usf3-201ENSMUST00000088356 SynmQ70IV5 1561 aa30.68■■■□□ 2.5
Usf3-201ENSMUST00000088356 NrkQ9R0G8 1455 aa30.65■■■□□ 2.5
Usf3-201ENSMUST00000088356 Abcc2Q8VI47 1543 aa30.63■■■□□ 2.49
Usf3-201ENSMUST00000088356 Abca16E9PWJ7 1678 aa30.61■■■□□ 2.49
Usf3-201ENSMUST00000088356 Map3k4O08648 1597 aa30.59■■■□□ 2.49
Usf3-201ENSMUST00000088356 AI481877A2ALV5 1481 aa30.59■■■□□ 2.49
Usf3-201ENSMUST00000088356 Gm14025A2AP89 1413 aa30.57■■■□□ 2.48
Usf3-201ENSMUST00000088356 Arhgap27A2AB59 869 aa30.54■■■□□ 2.48
Usf3-201ENSMUST00000088356 Shroom4Q1W617 1475 aa30.53■■■□□ 2.48
Usf3-201ENSMUST00000088356 EprsQ8CGC7 1512 aaKnown RBP30.52■■■□□ 2.48
Usf3-201ENSMUST00000088356 PxdnQ3UQ28 1475 aa30.51■■■□□ 2.48
Usf3-201ENSMUST00000088356 TchhA0A0B4J1F9 1599 aa30.5■■■□□ 2.47
Usf3-201ENSMUST00000088356 WizO88286 1684 aaKnown RBP30.5■■■□□ 2.47
Usf3-201ENSMUST00000088356 Arhgef12Q8R4H2 1543 aaKnown RBP30.47■■■□□ 2.47
Usf3-201ENSMUST00000088356 Ccdc88bQ4QRL3 1481 aa30.46■■■□□ 2.47
Usf3-201ENSMUST00000088356 Ifnlr1Q8CGK5 535 aa30.46■■■□□ 2.47
Usf3-201ENSMUST00000088356 AdgbG3UZ78 1657 aa30.44■■■□□ 2.46
Usf3-201ENSMUST00000088356 Ttc37F8VPK0 1563 aa30.4■■■□□ 2.46
Usf3-201ENSMUST00000088356 Eif4g1Q6NZJ6 1600 aaKnown RBP30.4■■■□□ 2.46
Usf3-201ENSMUST00000088356 Clasp1Q80TV8 1535 aaKnown RBP30.39■■■□□ 2.46
Usf3-201ENSMUST00000088356 Adamts12Q811B3 1600 aa30.36■■■□□ 2.45
Usf3-201ENSMUST00000088356 Mapkbp1Q6NS57 1503 aa30.35■■■□□ 2.45
Usf3-201ENSMUST00000088356 Zeb1Q64318 1117 aa30.34■■■□□ 2.45
Usf3-201ENSMUST00000088356 Alpk3Q924C5 1678 aa30.33■■■□□ 2.45
Usf3-201ENSMUST00000088356 Slx4Q6P1D7 1565 aa30.33■■■□□ 2.45
Usf3-201ENSMUST00000088356 Arhgef11Q68FM7 1552 aa30.3■■■□□ 2.44
Usf3-201ENSMUST00000088356 Depdc5P61460 1591 aa30.24■■■□□ 2.43
Usf3-201ENSMUST00000088356 Plppr3Q7TPB0 716 aa30.18■■■□□ 2.42
Usf3-201ENSMUST00000088356 Arid3cA6PWV5 409 aa30.17■■■□□ 2.42
Usf3-201ENSMUST00000088356 Jph4Q80WT0 628 aa30.15■■■□□ 2.42
Usf3-201ENSMUST00000088356 Fkbp15Q6P9Q6 1216 aaKnown RBP30.13■■■□□ 2.41
Usf3-201ENSMUST00000088356 Lrrc9Q8CDN9 1456 aa30.12■■■□□ 2.41
Usf3-201ENSMUST00000088356 Rpap1Q80TE0 1409 aa30.1■■■□□ 2.41
Usf3-201ENSMUST00000088356 Fndc1E9Q043 1732 aa30.09■■■□□ 2.41
Usf3-201ENSMUST00000088356 Zfyve16Q80U44 1528 aa30.07■■■□□ 2.4
Usf3-201ENSMUST00000088356 Dnajc5gQ8C632 165 aa30.06■■■□□ 2.4
Usf3-201ENSMUST00000088356 Mroh2bQ7M6Y6 1581 aa30.05■■■□□ 2.4
Usf3-201ENSMUST00000088356 Znf608Q56A10 1511 aa30.05■■■□□ 2.4
Usf3-201ENSMUST00000088356 Chic1Q8CBW7 227 aa30.03■■■□□ 2.4
Usf3-201ENSMUST00000088356 Abca5Q8K448 1642 aa30■■■□□ 2.39
Usf3-201ENSMUST00000088356 Gm7298A0A0N4SVU1 1476 aa29.98■■■□□ 2.39
Usf3-201ENSMUST00000088356 Igf1rQ60751 1373 aa29.93■■■□□ 2.38
Usf3-201ENSMUST00000088356 Kdm5bQ80Y84 1544 aa29.92■■■□□ 2.38
Usf3-201ENSMUST00000088356 Rrbp1Q99PL5 1605 aaKnown RBP29.9■■■□□ 2.38
Usf3-201ENSMUST00000088356 MlecQ6ZQI3 291 aaKnown RBP29.89■■■□□ 2.38
Usf3-201ENSMUST00000088356 Wdr7Q920I9 1489 aa29.88■■■□□ 2.37
Usf3-201ENSMUST00000088356 Carmil1Q6EDY6 1374 aa29.84■■■□□ 2.37
Usf3-201ENSMUST00000088356 WrnO09053 1401 aa29.83■■■□□ 2.37
Usf3-201ENSMUST00000088356 Cyb5rlB1AS42 316 aa29.8■■■□□ 2.36
Usf3-201ENSMUST00000088356 Npm2Q80W85 207 aa29.8■■■□□ 2.36
Usf3-201ENSMUST00000088356 Map3k1P53349 1493 aa29.8■■■□□ 2.36
Usf3-201ENSMUST00000088356 Cul7Q8VE73 1689 aa29.79■■■□□ 2.36
Usf3-201ENSMUST00000088356 Brwd3A2AHJ4 1799 aa29.77■■■□□ 2.36
Usf3-201ENSMUST00000088356 NhsB1AV60 1647 aa29.75■■■□□ 2.35
Usf3-201ENSMUST00000088356 AglF8VPN4 1532 aa29.75■■■□□ 2.35
Usf3-201ENSMUST00000088356 Rnf17Q99MV7 1640 aa29.69■■■□□ 2.34
Usf3-201ENSMUST00000088356 Kdm6bQ5NCY0 1641 aa29.68■■■□□ 2.34
Usf3-201ENSMUST00000088356 Ercc6l2Q9JIM3 1537 aa29.66■■■□□ 2.34
Usf3-201ENSMUST00000088356 Polr1aO35134 1717 aaKnown RBP29.66■■■□□ 2.34
Usf3-201ENSMUST00000088356 Atp10dQ8K2X1 1416 aa29.65■■■□□ 2.34
Usf3-201ENSMUST00000088356 Hecw2Q6I6G8 1578 aa29.6■■■□□ 2.33
Usf3-201ENSMUST00000088356 Arhgap31A6X8Z5 1425 aa29.57■■■□□ 2.32
Usf3-201ENSMUST00000088356 Arhgap35Q91YM2 1499 aa29.56■■■□□ 2.32
Usf3-201ENSMUST00000088356 Cux1P53564 1515 aa29.55■■■□□ 2.32
Usf3-201ENSMUST00000088356 Ccdc141E9Q8Q6 1531 aa29.55■■■□□ 2.32
Usf3-201ENSMUST00000088356 Gcc2Q8CHG3 1679 aa29.47■■■□□ 2.31
Usf3-201ENSMUST00000088356 Naip2Q9QUK4 1447 aa29.46■■■□□ 2.31
Usf3-201ENSMUST00000088356 A2mQ6GQT1 1474 aa29.46■■■□□ 2.31
Usf3-201ENSMUST00000088356 Mroh2aD3Z750 1679 aa29.45■■■□□ 2.31
Usf3-201ENSMUST00000088356 Abca8bQ8K440 1620 aa29.41■■■□□ 2.3
Usf3-201ENSMUST00000088356 Kiaa1210E9Q0C6 1637 aa29.34■■■□□ 2.29
Usf3-201ENSMUST00000088356 Fyco1Q8VDC1 1437 aa29.34■■■□□ 2.29
Usf3-201ENSMUST00000088356 Qser1A2BIE1 1698 aa29.31■■■□□ 2.28
Usf3-201ENSMUST00000088356 Clip1Q922J3 1391 aa29.3■■■□□ 2.28
Usf3-201ENSMUST00000088356 Fancd2Q80V62 1450 aa29.29■■■□□ 2.28
Usf3-201ENSMUST00000088356 Kif14L0N7N1 1674 aaKnown RBP29.25■■■□□ 2.27
Usf3-201ENSMUST00000088356 Fbxo41Q6NS60 873 aa29.23■■■□□ 2.27
Usf3-201ENSMUST00000088356 Rapgef6Q5NCJ1 1609 aa29.21■■■□□ 2.27
Usf3-201ENSMUST00000088356 PtprmP28828 1452 aa29.21■■■□□ 2.27
Usf3-201ENSMUST00000088356 Ncoa2Q61026 1462 aa29.19■■■□□ 2.26
Usf3-201ENSMUST00000088356 BlmO88700 1416 aa29.19■■■□□ 2.26
Usf3-201ENSMUST00000088356 Mlh3A0A1Y7VMP7 1443 aa29.16■■■□□ 2.26
Usf3-201ENSMUST00000088356 Synj2Q9D2G5 1434 aa29.16■■■□□ 2.26
Usf3-201ENSMUST00000088356 Abca9Q8K449 1623 aa29.15■■■□□ 2.26
Usf3-201ENSMUST00000088356 Adamtsl3G3UXC7 1706 aa29.14■■■□□ 2.26
Usf3-201ENSMUST00000088356 Arap1Q4LDD4 1452 aa29.14■■■□□ 2.26
Retrieved 100 of 22,080 RNA–protein pairs in 70.4 ms