RNA–Protein interactions for RNA: ENSMUST00000088307.3

BC003965-201, mousemouse

APPRIS P1 TSL 2 BASIC

Gene BC003965, Length 3,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BC003965-201ENSMUST00000088307 Shroom4Q1W617 1475 aa19.75■□□□□ 0.75
BC003965-201ENSMUST00000088307 Dnajc5bQ9CQ94 199 aa19.75■□□□□ 0.75
BC003965-201ENSMUST00000088307 Thoc2B1AZI6 1594 aaKnown RBP19.73■□□□□ 0.75
BC003965-201ENSMUST00000088307 Grin2bQ01097 1482 aa19.72■□□□□ 0.75
BC003965-201ENSMUST00000088307 NrkQ9R0G8 1455 aa19.72■□□□□ 0.75
BC003965-201ENSMUST00000088307 Lmod2Q3UHZ5 550 aa19.71■□□□□ 0.75
BC003965-201ENSMUST00000088307 Baz1bQ9Z277 1479 aa19.71■□□□□ 0.75
BC003965-201ENSMUST00000088307 Eea1Q8BL66 1411 aa19.7■□□□□ 0.74
BC003965-201ENSMUST00000088307 Eif4g1Q6NZJ6 1600 aaKnown RBP19.7■□□□□ 0.74
BC003965-201ENSMUST00000088307 LrpprcQ6PB66 1392 aaKnown RBP19.64■□□□□ 0.74
BC003965-201ENSMUST00000088307 Arap1Q4LDD4 1452 aa19.63■□□□□ 0.73
BC003965-201ENSMUST00000088307 Ttbk1Q6PCN3 1308 aa19.61■□□□□ 0.73
BC003965-201ENSMUST00000088307 Hdac5Q9Z2V6 1113 aa19.58■□□□□ 0.73
BC003965-201ENSMUST00000088307 Mroh2bQ7M6Y6 1581 aa19.58■□□□□ 0.72
BC003965-201ENSMUST00000088307 BlmO88700 1416 aa19.57■□□□□ 0.72
BC003965-201ENSMUST00000088307 Eid3Q3V124 375 aa19.55■□□□□ 0.72
BC003965-201ENSMUST00000088307 Duox2A2AQ99 1517 aa19.54■□□□□ 0.72
BC003965-201ENSMUST00000088307 Anp32aO35381 247 aa19.54■□□□□ 0.72
BC003965-201ENSMUST00000088307 Dhx29Q6PGC1 1365 aaKnown RBP19.53■□□□□ 0.72
BC003965-201ENSMUST00000088307 Tnnt3Q9QZ47 272 aa19.53■□□□□ 0.72
BC003965-201ENSMUST00000088307 Fam50aQ9WV03 339 aaKnown RBP19.51■□□□□ 0.71
BC003965-201ENSMUST00000088307 PogzQ8BZH4 1409 aaKnown RBP19.51■□□□□ 0.71
BC003965-201ENSMUST00000088307 Fam135aQ6NS59 1506 aa19.5■□□□□ 0.71
BC003965-201ENSMUST00000088307 Efcab5A0JP43 1406 aa19.49■□□□□ 0.71
BC003965-201ENSMUST00000088307 Map3k1P53349 1493 aa19.48■□□□□ 0.71
BC003965-201ENSMUST00000088307 Rad54l2Q99NG0 1466 aa19.47■□□□□ 0.71
BC003965-201ENSMUST00000088307 AqrQ8CFQ3 1481 aaKnown RBP19.46■□□□□ 0.71
BC003965-201ENSMUST00000088307 Arhgef5E9Q7D5 1581 aa19.46■□□□□ 0.71
BC003965-201ENSMUST00000088307 TonslQ6NZL6 1363 aa19.45■□□□□ 0.7
BC003965-201ENSMUST00000088307 Carmil1Q6EDY6 1374 aa19.42■□□□□ 0.7
BC003965-201ENSMUST00000088307 Nolc1E9Q5C9 702 aaKnown RBP19.41■□□□□ 0.7
BC003965-201ENSMUST00000088307 Ncapd3Q6ZQK0 1506 aa19.41■□□□□ 0.7
BC003965-201ENSMUST00000088307 Cux1P53564 1515 aa19.38■□□□□ 0.69
BC003965-201ENSMUST00000088307 Naip1Q9QWK5 1403 aa19.38■□□□□ 0.69
BC003965-201ENSMUST00000088307 Ankrd26Q811D2 1581 aa19.38■□□□□ 0.69
BC003965-201ENSMUST00000088307 Rtl5Q5DTT4 599 aa19.37■□□□□ 0.69
BC003965-201ENSMUST00000088307 Aebp1Q640N1 1128 aa19.36■□□□□ 0.69
BC003965-201ENSMUST00000088307 Samd9lQ69Z37 1561 aa19.34■□□□□ 0.69
BC003965-201ENSMUST00000088307 Pelp1Q9DBD5 1123 aaKnown RBP19.32■□□□□ 0.68
BC003965-201ENSMUST00000088307 Tiam1Q60610 1591 aa19.31■□□□□ 0.68
BC003965-201ENSMUST00000088307 Pcf11G3X9Z4 1553 aa19.31■□□□□ 0.68
BC003965-201ENSMUST00000088307 Mrc2Q64449 1479 aa19.31■□□□□ 0.68
BC003965-201ENSMUST00000088307 Ube2uB1AUC4 352 aa19.29■□□□□ 0.68
BC003965-201ENSMUST00000088307 Slx4Q6P1D7 1565 aa19.27■□□□□ 0.68
BC003965-201ENSMUST00000088307 Kif21aQ9QXL2 1672 aa19.27■□□□□ 0.68
BC003965-201ENSMUST00000088307 SynmQ70IV5 1561 aa19.26■□□□□ 0.67
BC003965-201ENSMUST00000088307 CntlnA2AM05 1397 aa19.24■□□□□ 0.67
BC003965-201ENSMUST00000088307 Crocc2F6XLV1 1638 aa19.24■□□□□ 0.67
BC003965-201ENSMUST00000088307 Fgd1P52734 960 aa19.24■□□□□ 0.67
BC003965-201ENSMUST00000088307 Plb1Q3TTY0 1478 aa19.23■□□□□ 0.67
BC003965-201ENSMUST00000088307 Pknox2Q8BG99 474 aa19.23■□□□□ 0.67
BC003965-201ENSMUST00000088307 Supt16hQ920B9 1047 aa19.22■□□□□ 0.67
BC003965-201ENSMUST00000088307 Chic2Q9D9G3 165 aa19.22■□□□□ 0.67
BC003965-201ENSMUST00000088307 Fyco1Q8VDC1 1437 aa19.21■□□□□ 0.67
BC003965-201ENSMUST00000088307 Plcd4Q8K3R3 807 aa19.21■□□□□ 0.67
BC003965-201ENSMUST00000088307 Rpap1Q80TE0 1409 aa19.2■□□□□ 0.66
BC003965-201ENSMUST00000088307 Erich3F6QRE9 1637 aa19.19■□□□□ 0.66
BC003965-201ENSMUST00000088307 Urb2E9Q7L1 1524 aaKnown RBP19.18■□□□□ 0.66
BC003965-201ENSMUST00000088307 Gtf3c3Q3TMP1 882 aa19.16■□□□□ 0.66
BC003965-201ENSMUST00000088307 EprsQ8CGC7 1512 aaKnown RBP19.15■□□□□ 0.66
BC003965-201ENSMUST00000088307 Arhgap27A2AB59 869 aa19.13■□□□□ 0.65
BC003965-201ENSMUST00000088307 Calr4Q3TQS0 420 aa19.13■□□□□ 0.65
BC003965-201ENSMUST00000088307 Lmo7E9PYF4 1699 aaKnown RBP19.12■□□□□ 0.65
BC003965-201ENSMUST00000088307 Pla2r1Q62028 1487 aa19.11■□□□□ 0.65
BC003965-201ENSMUST00000088307 Znf710Q3U288 666 aa19.11■□□□□ 0.65
BC003965-201ENSMUST00000088307 3425401B19RikD3Z1D3 1412 aa19.1■□□□□ 0.65
BC003965-201ENSMUST00000088307 CadpsQ80TJ1 1355 aa19.1■□□□□ 0.65
BC003965-201ENSMUST00000088307 Upf2A2AT37 1269 aaKnown RBP19.09■□□□□ 0.65
BC003965-201ENSMUST00000088307 Kif27Q7M6Z4 1394 aa19.08■□□□□ 0.65
BC003965-201ENSMUST00000088307 Grin2aP35436 1464 aa19.08■□□□□ 0.64
BC003965-201ENSMUST00000088307 NrdcQ8BHG1 1161 aa19.06■□□□□ 0.64
BC003965-201ENSMUST00000088307 Gm7298A0A0N4SVU1 1476 aa19.06■□□□□ 0.64
BC003965-201ENSMUST00000088307 Magi3Q9EQJ9 1476 aa19.06■□□□□ 0.64
BC003965-201ENSMUST00000088307 Disp1Q3TDN0 1521 aa19.06■□□□□ 0.64
BC003965-201ENSMUST00000088307 Polr1aO35134 1717 aaKnown RBP19.05■□□□□ 0.64
BC003965-201ENSMUST00000088307 Fkbp15Q6P9Q6 1216 aaKnown RBP19.05■□□□□ 0.64
BC003965-201ENSMUST00000088307 Gm1043A0A140LJC2 1431 aa19.04■□□□□ 0.64
BC003965-201ENSMUST00000088307 Ccnb3Q810T2 1396 aa19.03■□□□□ 0.64
BC003965-201ENSMUST00000088307 NclP09405 707 aaKnown RBP19.03■□□□□ 0.64
BC003965-201ENSMUST00000088307 Ppp4r2Q0VGB7 417 aa19.02■□□□□ 0.64
BC003965-201ENSMUST00000088307 Hspa5P20029 655 aaKnown RBP19.01■□□□□ 0.63
BC003965-201ENSMUST00000088307 Kdm5bQ80Y84 1544 aa19.01■□□□□ 0.63
BC003965-201ENSMUST00000088307 Gpatch8A2A6A1 1505 aa19.01■□□□□ 0.63
BC003965-201ENSMUST00000088307 WizO88286 1684 aaKnown RBP18.99■□□□□ 0.63
BC003965-201ENSMUST00000088307 WrnO09053 1401 aa18.99■□□□□ 0.63
BC003965-201ENSMUST00000088307 PxdnQ3UQ28 1475 aa18.97■□□□□ 0.63
BC003965-201ENSMUST00000088307 Pak3Q61036 559 aa18.96■□□□□ 0.63
BC003965-201ENSMUST00000088307 Irx3P81067 507 aa18.95■□□□□ 0.62
BC003965-201ENSMUST00000088307 Ccdc27Q3V036 639 aa18.91■□□□□ 0.62
BC003965-201ENSMUST00000088307 Slc24a1Q91WD8 1130 aa18.9■□□□□ 0.62
BC003965-201ENSMUST00000088307 Cabp1Q9JLK7 227 aa18.89■□□□□ 0.61
BC003965-201ENSMUST00000088307 Mia2Q91ZV0 1396 aa18.89■□□□□ 0.61
BC003965-201ENSMUST00000088307 A2mQ6GQT1 1474 aa18.89■□□□□ 0.61
BC003965-201ENSMUST00000088307 Stra8P70278 393 aa18.87■□□□□ 0.61
BC003965-201ENSMUST00000088307 Setd1bQ8CFT2 1985 aa18.87■□□□□ 0.61
BC003965-201ENSMUST00000088307 TchhA0A0B4J1F9 1599 aa18.87■□□□□ 0.61
BC003965-201ENSMUST00000088307 Naip2Q9QUK4 1447 aa18.86■□□□□ 0.61
BC003965-201ENSMUST00000088307 Ift140E9PY46 1464 aa18.86■□□□□ 0.61
BC003965-201ENSMUST00000088307 Wdr43Q6ZQL4 677 aaKnown RBP18.86■□□□□ 0.61
BC003965-201ENSMUST00000088307 Peg3Q3URU2 1571 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms