RNA–Protein interactions for RNA: ENSMUST00000088307.3

BC003965-201, mousemouse

APPRIS P1 TSL 2 BASIC

Gene BC003965, Length 3,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BC003965-201ENSMUST00000088307 NischQ80TM9 1593 aa25.76■■□□□ 1.71
BC003965-201ENSMUST00000088307 Gm35339A0A140LHH9 1649 aa24.99■■□□□ 1.59
BC003965-201ENSMUST00000088307 Abcc9P70170 1546 aa24.84■■□□□ 1.57
BC003965-201ENSMUST00000088307 Abcc8B2RUS7 1588 aa24.43■■□□□ 1.5
BC003965-201ENSMUST00000088307 Rhox8Q6VSS7 320 aa24.32■■□□□ 1.48
BC003965-201ENSMUST00000088307 Rpgrip1Q9EPQ2 1331 aa23.2■■□□□ 1.31
BC003965-201ENSMUST00000088307 ScribQ80U72 1612 aa22.88■■□□□ 1.25
BC003965-201ENSMUST00000088307 Rtl1Q7M732 1744 aa22.75■■□□□ 1.23
BC003965-201ENSMUST00000088307 Ccdc136Q3TVA9 1136 aa22.61■■□□□ 1.21
BC003965-201ENSMUST00000088307 Rb1cc1Q9ESK9 1588 aa22.55■■□□□ 1.2
BC003965-201ENSMUST00000088307 Pcgf6Q99NA9 353 aa22.55■■□□□ 1.2
BC003965-201ENSMUST00000088307 Ccdc180J3QNE4 1664 aa22.49■■□□□ 1.19
BC003965-201ENSMUST00000088307 Kdm5dQ62240 1548 aa22.49■■□□□ 1.19
BC003965-201ENSMUST00000088307 Acin1Q9JIX8 1338 aaKnown RBP22.48■■□□□ 1.19
BC003965-201ENSMUST00000088307 Dcaf1Q80TR8 1506 aa22.48■■□□□ 1.19
BC003965-201ENSMUST00000088307 Ehmt2Q9Z148 1263 aaKnown RBP22.33■■□□□ 1.17
BC003965-201ENSMUST00000088307 NacadQ5SWP3 1504 aa22.28■■□□□ 1.16
BC003965-201ENSMUST00000088307 Zcchc6Q5BLK4 1491 aaKnown RBP22.24■■□□□ 1.15
BC003965-201ENSMUST00000088307 Baz1aO88379 1555 aa22.19■■□□□ 1.14
BC003965-201ENSMUST00000088307 Neurod1Q60867 357 aa21.89■■□□□ 1.09
BC003965-201ENSMUST00000088307 Supt5hO55201 1082 aaKnown RBP21.84■■□□□ 1.09
BC003965-201ENSMUST00000088307 Trim41Q5NCC3 630 aa21.81■■□□□ 1.08
BC003965-201ENSMUST00000088307 Sycp2Q9CUU3 1500 aa21.8■■□□□ 1.08
BC003965-201ENSMUST00000088307 HrcG5E8J6 738 aa21.7■■□□□ 1.06
BC003965-201ENSMUST00000088307 Smarca2Q6DIC0 1577 aa21.63■■□□□ 1.05
BC003965-201ENSMUST00000088307 Crybg2B7ZCC2 1516 aa21.62■■□□□ 1.05
BC003965-201ENSMUST00000088307 Cngb1E1AZ71 1325 aa21.6■■□□□ 1.05
BC003965-201ENSMUST00000088307 Las1lA2BE28 776 aaKnown RBP21.59■■□□□ 1.05
BC003965-201ENSMUST00000088307 1700123L14RikQ3V2K7 440 aa21.47■■□□□ 1.03
BC003965-201ENSMUST00000088307 Cecr2E9Q2Z1 1453 aa21.46■■□□□ 1.03
BC003965-201ENSMUST00000088307 Esf1Q3V1V3 845 aaKnown RBP21.39■■□□□ 1.01
BC003965-201ENSMUST00000088307 BicraF8VPZ9 1578 aa21.37■■□□□ 1.01
BC003965-201ENSMUST00000088307 CenpbP27790 599 aa21.34■■□□□ 1.01
BC003965-201ENSMUST00000088307 Gab3Q8BSM5 595 aa21.33■■□□□ 1.01
BC003965-201ENSMUST00000088307 Chic1Q8CBW7 227 aa21.28■■□□□ 1
BC003965-201ENSMUST00000088307 Brd4Q9ESU6 1400 aaKnown RBP21.27■□□□□ 0.99
BC003965-201ENSMUST00000088307 Csrnp3P59055 597 aa21.26■□□□□ 0.99
BC003965-201ENSMUST00000088307 DiexfQ8BTT6 772 aaKnown RBP21.25■□□□□ 0.99
BC003965-201ENSMUST00000088307 Synj1Q8CHC4 1574 aa21.12■□□□□ 0.97
BC003965-201ENSMUST00000088307 Zeb1Q64318 1117 aa21.11■□□□□ 0.97
BC003965-201ENSMUST00000088307 Myt1Q8CFC2 1127 aa21.11■□□□□ 0.97
BC003965-201ENSMUST00000088307 Cep164Q5DU05 1446 aa21.08■□□□□ 0.97
BC003965-201ENSMUST00000088307 Rsf1E9PWW9 1441 aaKnown RBP21.08■□□□□ 0.96
BC003965-201ENSMUST00000088307 CftrP26361 1476 aa21■□□□□ 0.95
BC003965-201ENSMUST00000088307 Ccdc88bQ4QRL3 1481 aa20.99■□□□□ 0.95
BC003965-201ENSMUST00000088307 Golga3P55937 1487 aa20.99■□□□□ 0.95
BC003965-201ENSMUST00000088307 Anks4bQ8K3X6 423 aa20.93■□□□□ 0.94
BC003965-201ENSMUST00000088307 Bcl11aQ9QYE3 773 aa20.91■□□□□ 0.94
BC003965-201ENSMUST00000088307 Gm38655A0A286YDK6 273 aa20.86■□□□□ 0.93
BC003965-201ENSMUST00000088307 Sall2Q9QX96 1004 aa20.83■□□□□ 0.93
BC003965-201ENSMUST00000088307 Smarca4Q3TKT4 1613 aaKnown RBP20.82■□□□□ 0.92
BC003965-201ENSMUST00000088307 Cttnbp2B9EJA2 1648 aa20.75■□□□□ 0.91
BC003965-201ENSMUST00000088307 Aplp2Q06335 707 aa20.71■□□□□ 0.91
BC003965-201ENSMUST00000088307 Myt1lP97500 1187 aa20.62■□□□□ 0.89
BC003965-201ENSMUST00000088307 Iqgap2Q3UQ44 1575 aa20.61■□□□□ 0.89
BC003965-201ENSMUST00000088307 Cc2d2aQ8CFW7 1633 aa20.58■□□□□ 0.89
BC003965-201ENSMUST00000088307 Top2bQ64511 1612 aa20.58■□□□□ 0.88
BC003965-201ENSMUST00000088307 Atad2bE9Q166 1460 aaKnown RBP20.55■□□□□ 0.88
BC003965-201ENSMUST00000088307 PrkcshO08795 521 aa20.55■□□□□ 0.88
BC003965-201ENSMUST00000088307 Il27Q8K3I6 234 aa20.53■□□□□ 0.88
BC003965-201ENSMUST00000088307 Npm2Q80W85 207 aa20.53■□□□□ 0.88
BC003965-201ENSMUST00000088307 Pds5bQ4VA53 1446 aaKnown RBP20.5■□□□□ 0.87
BC003965-201ENSMUST00000088307 Cdk11bP24788 784 aaKnown RBP20.41■□□□□ 0.86
BC003965-201ENSMUST00000088307 Fmn1Q05860 1466 aa20.41■□□□□ 0.86
BC003965-201ENSMUST00000088307 Wdr66E9Q743 1299 aa20.36■□□□□ 0.85
BC003965-201ENSMUST00000088307 Ifnlr1Q8CGK5 535 aa20.35■□□□□ 0.85
BC003965-201ENSMUST00000088307 NefmP08553 848 aa20.34■□□□□ 0.85
BC003965-201ENSMUST00000088307 Ppargc1bQ8VHJ7 1014 aa20.34■□□□□ 0.85
BC003965-201ENSMUST00000088307 UbtfP25976 765 aaKnown RBP20.34■□□□□ 0.85
BC003965-201ENSMUST00000088307 Nop58Q6DFW4 536 aaKnown RBP20.33■□□□□ 0.85
BC003965-201ENSMUST00000088307 Fam71e1A1L3C1 212 aa20.31■□□□□ 0.84
BC003965-201ENSMUST00000088307 Frmpd1A2AKB4 1549 aa20.29■□□□□ 0.84
BC003965-201ENSMUST00000088307 Mier1Q5UAK0 511 aa20.27■□□□□ 0.84
BC003965-201ENSMUST00000088307 Kif15Q6P9L6 1387 aa20.23■□□□□ 0.83
BC003965-201ENSMUST00000088307 Top2aQ01320 1528 aaKnown RBP20.23■□□□□ 0.83
BC003965-201ENSMUST00000088307 Rapgef2Q8CHG7 1496 aa20.23■□□□□ 0.83
BC003965-201ENSMUST00000088307 Ercc6F8VPZ5 1481 aa20.2■□□□□ 0.82
BC003965-201ENSMUST00000088307 Mapk8ip2Q9ERE9 830 aa20.19■□□□□ 0.82
BC003965-201ENSMUST00000088307 Aebp2Q9Z248 504 aaKnown RBP20.19■□□□□ 0.82
BC003965-201ENSMUST00000088307 Cep162Q6ZQ06 1403 aa20.18■□□□□ 0.82
BC003965-201ENSMUST00000088307 Wdr62Q3U3T8 1523 aa20.17■□□□□ 0.82
BC003965-201ENSMUST00000088307 Ap3b1Q9Z1T1 1105 aa20.11■□□□□ 0.81
BC003965-201ENSMUST00000088307 Ubl4bQ9CQ84 188 aa20.11■□□□□ 0.81
BC003965-201ENSMUST00000088307 Plekhg3Q4VAC9 1341 aa20.11■□□□□ 0.81
BC003965-201ENSMUST00000088307 Amer1Q7TS75 1132 aa20.07■□□□□ 0.8
BC003965-201ENSMUST00000088307 SafbD3YXK2 937 aaKnown RBP20.05■□□□□ 0.8
BC003965-201ENSMUST00000088307 PtprkP35822 1457 aa20.02■□□□□ 0.79
BC003965-201ENSMUST00000088307 Clip1Q922J3 1391 aa20.01■□□□□ 0.79
BC003965-201ENSMUST00000088307 Npm1Q61937 292 aaKnown RBP19.98■□□□□ 0.79
BC003965-201ENSMUST00000088307 TnnQ80Z71 1560 aa19.94■□□□□ 0.78
BC003965-201ENSMUST00000088307 Lamc3Q9R0B6 1581 aa19.92■□□□□ 0.78
BC003965-201ENSMUST00000088307 Unc13aQ4KUS2 1712 aa19.91■□□□□ 0.78
BC003965-201ENSMUST00000088307 Phldb1Q6PDH0 1371 aaKnown RBP19.91■□□□□ 0.78
BC003965-201ENSMUST00000088307 ClspnQ80YR7 1315 aa19.91■□□□□ 0.78
BC003965-201ENSMUST00000088307 Cux2P70298 1426 aa19.88■□□□□ 0.77
BC003965-201ENSMUST00000088307 Ccdc18Q640L5 1455 aa19.87■□□□□ 0.77
BC003965-201ENSMUST00000088307 Hnrnpul2Q00PI9 745 aaKnown RBP19.86■□□□□ 0.77
BC003965-201ENSMUST00000088307 Arhgap35Q91YM2 1499 aa19.85■□□□□ 0.77
BC003965-201ENSMUST00000088307 Camsap1A2AHC3 1581 aa19.82■□□□□ 0.76
BC003965-201ENSMUST00000088307 Setd5Q5XJV7 1441 aa19.76■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms