RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Stra8P70278 393 aa11.66□□□□□ -0.54
Cdc40-201ENSMUST00000044166 Rtn4Q99P72 1162 aaKnown RBP11.66□□□□□ -0.54
Cdc40-201ENSMUST00000044166 Eea1Q8BL66 1411 aa11.65□□□□□ -0.54
Cdc40-201ENSMUST00000044166 Ap3b1Q9Z1T1 1105 aa11.64□□□□□ -0.55
Cdc40-201ENSMUST00000044166 Kdm5bQ80Y84 1544 aa11.64□□□□□ -0.55
Cdc40-201ENSMUST00000044166 Ccdc18Q640L5 1455 aa11.62□□□□□ -0.55
Cdc40-201ENSMUST00000044166 Anp32aO35381 247 aa11.61□□□□□ -0.55
Cdc40-201ENSMUST00000044166 TimelessQ9R1X4 1197 aa11.61□□□□□ -0.55
Cdc40-201ENSMUST00000044166 Arap1Q4LDD4 1452 aa11.61□□□□□ -0.55
Cdc40-201ENSMUST00000044166 Arhgap35Q91YM2 1499 aa11.61□□□□□ -0.55
Cdc40-201ENSMUST00000044166 Pelp1Q9DBD5 1123 aaKnown RBP11.6□□□□□ -0.55
Cdc40-201ENSMUST00000044166 Baz1bQ9Z277 1479 aa11.59□□□□□ -0.55
Cdc40-201ENSMUST00000044166 Znf710Q3U288 666 aa11.58□□□□□ -0.56
Cdc40-201ENSMUST00000044166 Arhgef5E9Q7D5 1581 aa11.58□□□□□ -0.56
Cdc40-201ENSMUST00000044166 Setd5Q5XJV7 1441 aa11.58□□□□□ -0.56
Cdc40-201ENSMUST00000044166 Rpap1Q80TE0 1409 aa11.56□□□□□ -0.56
Cdc40-201ENSMUST00000044166 NclP09405 707 aaKnown RBP11.55□□□□□ -0.56
Cdc40-201ENSMUST00000044166 TchhA0A0B4J1F9 1599 aa11.55□□□□□ -0.56
Cdc40-201ENSMUST00000044166 Iqgap2Q3UQ44 1575 aa11.55□□□□□ -0.56
Cdc40-201ENSMUST00000044166 Irx3P81067 507 aa11.55□□□□□ -0.56
Cdc40-201ENSMUST00000044166 NrkQ9R0G8 1455 aa11.54□□□□□ -0.56
Cdc40-201ENSMUST00000044166 Scaf1Q5U4C3 1256 aaKnown RBP11.53□□□□□ -0.56
Cdc40-201ENSMUST00000044166 TnnQ80Z71 1560 aa11.53□□□□□ -0.56
Cdc40-201ENSMUST00000044166 Rtl5Q5DTT4 599 aa11.53□□□□□ -0.56
Cdc40-201ENSMUST00000044166 PtprkP35822 1457 aa11.51□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Tiam1Q60610 1591 aa11.5□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Calr4Q3TQS0 420 aa11.49□□□□□ -0.57
Cdc40-201ENSMUST00000044166 BlmO88700 1416 aa11.49□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Map3k1P53349 1493 aa11.48□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Upf2A2AT37 1269 aaKnown RBP11.48□□□□□ -0.57
Cdc40-201ENSMUST00000044166 UacaQ8CGB3 1411 aa11.48□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Gm13697A2AK42 830 aa11.48□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Znf692Q3U381 531 aa11.47□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Zbtb4Q5F293 982 aa11.47□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Znf316Q6PGE4 1016 aa11.47□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Fam50aQ9WV03 339 aaKnown RBP11.47□□□□□ -0.57
Cdc40-201ENSMUST00000044166 AampJ3QN89 436 aa11.46□□□□□ -0.57
Cdc40-201ENSMUST00000044166 Naip1Q9QWK5 1403 aa11.46□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Ccer2J3QPU5 274 aa11.46□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Shroom4Q1W617 1475 aa11.44□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Ipo4Q8VI75 1082 aa11.44□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Nolc1E9Q5C9 702 aaKnown RBP11.43□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Vgll3P85442 326 aa11.42□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Atad2bE9Q166 1460 aaKnown RBP11.42□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Ankrd36D3Z4K0 1415 aa11.42□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Chrna2Q91X60 512 aa11.4□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Rbm10Q99KG3 930 aaKnown RBP11.4□□□□□ -0.58
Cdc40-201ENSMUST00000044166 Erich3F6QRE9 1637 aa11.39□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Hspa5P20029 655 aaKnown RBP11.39□□□□□ -0.59
Cdc40-201ENSMUST00000044166 NgefQ8CHT1 710 aa11.39□□□□□ -0.59
Cdc40-201ENSMUST00000044166 4933416C03RikQ3V063 378 aa11.39□□□□□ -0.59
Cdc40-201ENSMUST00000044166 AqrQ8CFQ3 1481 aaKnown RBP11.39□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Mia2Q91ZV0 1396 aa11.39□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Fhad1A6PWD2 1420 aa11.38□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Smg6P61406 1418 aaKnown RBP11.37□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Supt16hQ920B9 1047 aa11.36□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Ankrd26Q811D2 1581 aa11.36□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Lamc3Q9R0B6 1581 aa11.36□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Mroh2bQ7M6Y6 1581 aa11.36□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Slx4Q6P1D7 1565 aa11.35□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Camsap1A2AHC3 1581 aa11.35□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Lmod2Q3UHZ5 550 aa11.35□□□□□ -0.59
Cdc40-201ENSMUST00000044166 CntlnA2AM05 1397 aa11.35□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Pcf11G3X9Z4 1553 aa11.34□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Camsap2Q8C1B1 1461 aa11.34□□□□□ -0.59
Cdc40-201ENSMUST00000044166 ArxO35085 564 aa11.34□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Dhx29Q6PGC1 1365 aaKnown RBP11.34□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Slc24a1Q91WD8 1130 aa11.34□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Kif15Q6P9L6 1387 aa11.34□□□□□ -0.59
Cdc40-201ENSMUST00000044166 Vps8Q0P5W1 1427 aa11.33□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Washc2Q6PGL7 1334 aa11.33□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Armcx1Q9CX83 456 aa11.33□□□□□ -0.6
Cdc40-201ENSMUST00000044166 3425401B19RikD3Z1D3 1412 aa11.32□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Fyco1Q8VDC1 1437 aa11.32□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Wdr43Q6ZQL4 677 aaKnown RBP11.32□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Ppp4r2Q0VGB7 417 aa11.31□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Pds5bQ4VA53 1446 aaKnown RBP11.3□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Ncoa2Q61026 1462 aa11.29□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Sin3aQ60520 1274 aaKnown RBP11.29□□□□□ -0.6
Cdc40-201ENSMUST00000044166 IbspQ61711 324 aa11.29□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Grin2bQ01097 1482 aa11.29□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Efcab5A0JP43 1406 aa11.28□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Lmo7E9PYF4 1699 aaKnown RBP11.28□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Frmpd1A2AKB4 1549 aa11.28□□□□□ -0.6
Cdc40-201ENSMUST00000044166 Ube2uB1AUC4 352 aa11.27□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Rsph4aQ8BYM7 716 aa11.27□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Naip2Q9QUK4 1447 aa11.26□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Naip5Q9R016 1403 aa11.26□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Crocc2F6XLV1 1638 aa11.26□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Wdr62Q3U3T8 1523 aa11.25□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Ccdc27Q3V036 639 aa11.25□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Carmil1Q6EDY6 1374 aa11.25□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Peg3Q3URU2 1571 aa11.24□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Kcnn1Q9EQR3 537 aa11.23□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Podxl2Q8CAE9 603 aa11.22□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Mrs2Q5NCE8 434 aa11.22□□□□□ -0.61
Cdc40-201ENSMUST00000044166 Cux1P53564 1515 aa11.21□□□□□ -0.61
Cdc40-201ENSMUST00000044166 DaxxO35613 739 aa11.2□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Hsp90aa1P07901 733 aaKnown RBP11.2□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Gm7298A0A0N4SVU1 1476 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms