RNA–Protein interactions for RNA: ENSMUST00000042824.12

Herc1-201, Transcript of HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Herc1, Length 15,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1-201ENSMUST00000042824 Mtus2Q3UHD3 1353 aa7.98□□□□□ -1.13
Herc1-201ENSMUST00000042824 Dhx57Q6P5D3 1388 aaKnown RBP7.98□□□□□ -1.13
Herc1-201ENSMUST00000042824 Synj1Q8CHC4 1574 aa7.98□□□□□ -1.13
Herc1-201ENSMUST00000042824 Cecr2E9Q2Z1 1453 aa7.97□□□□□ -1.13
Herc1-201ENSMUST00000042824 Rpap1Q80TE0 1409 aa7.97□□□□□ -1.13
Herc1-201ENSMUST00000042824 Zfp777B9EKF4 885 aa7.97□□□□□ -1.13
Herc1-201ENSMUST00000042824 Cep162Q6ZQ06 1403 aa7.96□□□□□ -1.13
Herc1-201ENSMUST00000042824 Kif27Q7M6Z4 1394 aa7.96□□□□□ -1.14
Herc1-201ENSMUST00000042824 DiexfQ8BTT6 772 aaKnown RBP7.95□□□□□ -1.14
Herc1-201ENSMUST00000042824 Chic2Q9D9G3 165 aa7.95□□□□□ -1.14
Herc1-201ENSMUST00000042824 Upf2A2AT37 1269 aaKnown RBP7.95□□□□□ -1.14
Herc1-201ENSMUST00000042824 LrpprcQ6PB66 1392 aaKnown RBP7.95□□□□□ -1.14
Herc1-201ENSMUST00000042824 CntlnA2AM05 1397 aa7.94□□□□□ -1.14
Herc1-201ENSMUST00000042824 Carmil1Q6EDY6 1374 aa7.94□□□□□ -1.14
Herc1-201ENSMUST00000042824 Baz1bQ9Z277 1479 aa7.93□□□□□ -1.14
Herc1-201ENSMUST00000042824 Cwc22Q8C5N3 908 aaKnown RBP7.93□□□□□ -1.14
Herc1-201ENSMUST00000042824 Fyco1Q8VDC1 1437 aa7.92□□□□□ -1.14
Herc1-201ENSMUST00000042824 Eid3Q3V124 375 aa7.92□□□□□ -1.14
Herc1-201ENSMUST00000042824 IqubQ8CDK3 788 aa7.91□□□□□ -1.14
Herc1-201ENSMUST00000042824 Ccdc88bQ4QRL3 1481 aa7.91□□□□□ -1.14
Herc1-201ENSMUST00000042824 Eif5bQ05D44 1216 aaKnown RBP7.9□□□□□ -1.14
Herc1-201ENSMUST00000042824 Aebp1Q640N1 1128 aa7.9□□□□□ -1.14
Herc1-201ENSMUST00000042824 Rtl5Q5DTT4 599 aa7.89□□□□□ -1.15
Herc1-201ENSMUST00000042824 Polr1aO35134 1717 aaKnown RBP7.89□□□□□ -1.15
Herc1-201ENSMUST00000042824 Efcab5A0JP43 1406 aa7.89□□□□□ -1.15
Herc1-201ENSMUST00000042824 AknaQ80VW7 1404 aa7.89□□□□□ -1.15
Herc1-201ENSMUST00000042824 Rrp7aQ9D1C9 280 aaKnown RBP7.87□□□□□ -1.15
Herc1-201ENSMUST00000042824 Supt5hO55201 1082 aaKnown RBP7.87□□□□□ -1.15
Herc1-201ENSMUST00000042824 Dhx29Q6PGC1 1365 aaKnown RBP7.87□□□□□ -1.15
Herc1-201ENSMUST00000042824 Mroh3A0A1D5RM54 893 aa7.87□□□□□ -1.15
Herc1-201ENSMUST00000042824 Lemd3Q9WU40 921 aa7.87□□□□□ -1.15
Herc1-201ENSMUST00000042824 Arid4bA2CG63 1314 aaKnown RBP7.86□□□□□ -1.15
Herc1-201ENSMUST00000042824 Plppr3Q7TPB0 716 aa7.86□□□□□ -1.15
Herc1-201ENSMUST00000042824 Srpk2O54781 681 aaKnown RBP7.85□□□□□ -1.15
Herc1-201ENSMUST00000042824 Ppp1r18Q8BQ30 594 aa7.83□□□□□ -1.16
Herc1-201ENSMUST00000042824 Arhgap35Q91YM2 1499 aa7.82□□□□□ -1.16
Herc1-201ENSMUST00000042824 Rgl3Q3UYI5 709 aa7.82□□□□□ -1.16
Herc1-201ENSMUST00000042824 Zbtb4Q5F293 982 aa7.82□□□□□ -1.16
Herc1-201ENSMUST00000042824 Pabpn1Q8CCS6 302 aaKnown RBP7.81□□□□□ -1.16
Herc1-201ENSMUST00000042824 Gm20521D3Z5F7 333 aa7.81□□□□□ -1.16
Herc1-201ENSMUST00000042824 WrnO09053 1401 aa7.8□□□□□ -1.16
Herc1-201ENSMUST00000042824 P3h3Q8CG70 732 aa7.8□□□□□ -1.16
Herc1-201ENSMUST00000042824 UacaQ8CGB3 1411 aa7.8□□□□□ -1.16
Herc1-201ENSMUST00000042824 Ncoa2Q61026 1462 aa7.8□□□□□ -1.16
Herc1-201ENSMUST00000042824 Map4P27546 1125 aaKnown RBP7.79□□□□□ -1.16
Herc1-201ENSMUST00000042824 Rapgef2Q8CHG7 1496 aa7.79□□□□□ -1.16
Herc1-201ENSMUST00000042824 Mrc2Q64449 1479 aa7.79□□□□□ -1.16
Herc1-201ENSMUST00000042824 NrkQ9R0G8 1455 aa7.79□□□□□ -1.16
Herc1-201ENSMUST00000042824 Card11Q8CIS0 1159 aa7.78□□□□□ -1.16
Herc1-201ENSMUST00000042824 Stard8Q8K031 1019 aa7.78□□□□□ -1.16
Herc1-201ENSMUST00000042824 Ppargc1bQ8VHJ7 1014 aa7.78□□□□□ -1.16
Herc1-201ENSMUST00000042824 Plekhh2Q8C115 1491 aa7.78□□□□□ -1.16
Herc1-201ENSMUST00000042824 Exosc9Q9JHI7 438 aaKnown RBP7.78□□□□□ -1.16
Herc1-201ENSMUST00000042824 Shroom4Q1W617 1475 aa7.78□□□□□ -1.16
Herc1-201ENSMUST00000042824 Iqcf3Q9D498 203 aa7.76□□□□□ -1.17
Herc1-201ENSMUST00000042824 Cux1P53564 1515 aa7.76□□□□□ -1.17
Herc1-201ENSMUST00000042824 Mrs2Q5NCE8 434 aa7.75□□□□□ -1.17
Herc1-201ENSMUST00000042824 Kdm2aP59997 1161 aa7.75□□□□□ -1.17
Herc1-201ENSMUST00000042824 Anp32aO35381 247 aa7.75□□□□□ -1.17
Herc1-201ENSMUST00000042824 Frmpd1A2AKB4 1549 aa7.74□□□□□ -1.17
Herc1-201ENSMUST00000042824 Top2aQ01320 1528 aaKnown RBP7.74□□□□□ -1.17
Herc1-201ENSMUST00000042824 Soga1E1U8D0 1418 aa7.74□□□□□ -1.17
Herc1-201ENSMUST00000042824 Arid3cA6PWV5 409 aa7.74□□□□□ -1.17
Herc1-201ENSMUST00000042824 Map3k1P53349 1493 aa7.74□□□□□ -1.17
Herc1-201ENSMUST00000042824 Chmp4bQ9D8B3 224 aaKnown RBP7.74□□□□□ -1.17
Herc1-201ENSMUST00000042824 Jph4Q80WT0 628 aa7.74□□□□□ -1.17
Herc1-201ENSMUST00000042824 BicraF8VPZ9 1578 aa7.73□□□□□ -1.17
Herc1-201ENSMUST00000042824 Cc2d2bA0A286YDU8 1405 aa7.73□□□□□ -1.17
Herc1-201ENSMUST00000042824 Prdm10Q3UTQ7 1184 aa7.73□□□□□ -1.17
Herc1-201ENSMUST00000042824 Polr3glQ8R0C0 218 aa7.73□□□□□ -1.17
Herc1-201ENSMUST00000042824 Ift140E9PY46 1464 aa7.73□□□□□ -1.17
Herc1-201ENSMUST00000042824 Pkd2O35245 966 aa7.72□□□□□ -1.17
Herc1-201ENSMUST00000042824 Grwd1Q810D6 446 aaKnown RBP7.72□□□□□ -1.17
Herc1-201ENSMUST00000042824 MyclP10166 368 aa7.72□□□□□ -1.17
Herc1-201ENSMUST00000042824 Cabp1Q9JLK7 227 aa7.72□□□□□ -1.17
Herc1-201ENSMUST00000042824 Duox2A2AQ99 1517 aa7.72□□□□□ -1.17
Herc1-201ENSMUST00000042824 Fhad1A6PWD2 1420 aa7.72□□□□□ -1.17
Herc1-201ENSMUST00000042824 Sall2Q9QX96 1004 aa7.71□□□□□ -1.17
Herc1-201ENSMUST00000042824 Wdr62Q3U3T8 1523 aa7.71□□□□□ -1.17
Herc1-201ENSMUST00000042824 Stag3O70576 1240 aa7.71□□□□□ -1.18
Herc1-201ENSMUST00000042824 Stk24Q99KH8 431 aa7.71□□□□□ -1.18
Herc1-201ENSMUST00000042824 Urb2E9Q7L1 1524 aaKnown RBP7.71□□□□□ -1.18
Herc1-201ENSMUST00000042824 Nup155Q99P88 1391 aaKnown RBP7.7□□□□□ -1.18
Herc1-201ENSMUST00000042824 PogzQ8BZH4 1409 aaKnown RBP7.7□□□□□ -1.18
Herc1-201ENSMUST00000042824 Fgd6Q69ZL1 1399 aa7.7□□□□□ -1.18
Herc1-201ENSMUST00000042824 Mphosph9A6H5Y1 991 aa7.69□□□□□ -1.18
Herc1-201ENSMUST00000042824 Rock2P70336 1388 aa7.69□□□□□ -1.18
Herc1-201ENSMUST00000042824 HdgfP51859 237 aaKnown RBP7.69□□□□□ -1.18
Herc1-201ENSMUST00000042824 Sart1Q9Z315 806 aaKnown RBP7.69□□□□□ -1.18
Herc1-201ENSMUST00000042824 Anks4bQ8K3X6 423 aa7.69□□□□□ -1.18
Herc1-201ENSMUST00000042824 Cc2d2aQ8CFW7 1633 aa7.69□□□□□ -1.18
Herc1-201ENSMUST00000042824 Ccnb3Q810T2 1396 aa7.68□□□□□ -1.18
Herc1-201ENSMUST00000042824 Prdm16A2A935 1275 aa7.68□□□□□ -1.18
Herc1-201ENSMUST00000042824 Gtf2e1Q9D0D5 440 aa7.68□□□□□ -1.18
Herc1-201ENSMUST00000042824 NudcO35685 332 aaKnown RBP7.68□□□□□ -1.18
Herc1-201ENSMUST00000042824 Mapk8ip3Q9ESN9 1337 aa7.68□□□□□ -1.18
Herc1-201ENSMUST00000042824 Grin2bQ01097 1482 aa7.68□□□□□ -1.18
Herc1-201ENSMUST00000042824 CadpsQ80TJ1 1355 aa7.67□□□□□ -1.18
Herc1-201ENSMUST00000042824 Kif3bQ61771 747 aa7.66□□□□□ -1.18
Herc1-201ENSMUST00000042824 Trak1Q6PD31 939 aa7.66□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms