RNA–Protein interactions for RNA: ENSMUST00000034880.9

Stra6-201, Transcript of Receptor for retinol uptake STRA6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stra6, Length 2,993 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6-201ENSMUST00000034880 Calr4Q3TQS0 420 aa14.34□□□□□ -0.11
Stra6-201ENSMUST00000034880 Ccdc18Q640L5 1455 aa14.33□□□□□ -0.12
Stra6-201ENSMUST00000034880 Fam50aQ9WV03 339 aaKnown RBP14.32□□□□□ -0.12
Stra6-201ENSMUST00000034880 Stra8P70278 393 aa14.32□□□□□ -0.12
Stra6-201ENSMUST00000034880 Slc24a1Q91WD8 1130 aa14.29□□□□□ -0.12
Stra6-201ENSMUST00000034880 Hspa5P20029 655 aaKnown RBP14.27□□□□□ -0.12
Stra6-201ENSMUST00000034880 TchhA0A0B4J1F9 1599 aa14.27□□□□□ -0.13
Stra6-201ENSMUST00000034880 PrkcshO08795 521 aa14.27□□□□□ -0.13
Stra6-201ENSMUST00000034880 AqrQ8CFQ3 1481 aaKnown RBP14.26□□□□□ -0.13
Stra6-201ENSMUST00000034880 BlmO88700 1416 aa14.26□□□□□ -0.13
Stra6-201ENSMUST00000034880 Tiam1Q60610 1591 aa14.25□□□□□ -0.13
Stra6-201ENSMUST00000034880 NrkQ9R0G8 1455 aa14.25□□□□□ -0.13
Stra6-201ENSMUST00000034880 Supt16hQ920B9 1047 aa14.23□□□□□ -0.13
Stra6-201ENSMUST00000034880 Kif15Q6P9L6 1387 aa14.22□□□□□ -0.13
Stra6-201ENSMUST00000034880 Naip1Q9QWK5 1403 aa14.22□□□□□ -0.13
Stra6-201ENSMUST00000034880 TnnQ80Z71 1560 aa14.22□□□□□ -0.13
Stra6-201ENSMUST00000034880 Lmod2Q3UHZ5 550 aa14.22□□□□□ -0.13
Stra6-201ENSMUST00000034880 Frmpd1A2AKB4 1549 aa14.22□□□□□ -0.13
Stra6-201ENSMUST00000034880 Sin3aQ60520 1274 aaKnown RBP14.21□□□□□ -0.13
Stra6-201ENSMUST00000034880 Gm13697A2AK42 830 aa14.2□□□□□ -0.14
Stra6-201ENSMUST00000034880 UacaQ8CGB3 1411 aa14.18□□□□□ -0.14
Stra6-201ENSMUST00000034880 Ppp4r2Q0VGB7 417 aa14.17□□□□□ -0.14
Stra6-201ENSMUST00000034880 Wdr62Q3U3T8 1523 aa14.16□□□□□ -0.14
Stra6-201ENSMUST00000034880 Eif5bQ05D44 1216 aaKnown RBP14.16□□□□□ -0.14
Stra6-201ENSMUST00000034880 Rtl5Q5DTT4 599 aa14.16□□□□□ -0.14
Stra6-201ENSMUST00000034880 Slx4Q6P1D7 1565 aa14.16□□□□□ -0.14
Stra6-201ENSMUST00000034880 Smg6P61406 1418 aaKnown RBP14.14□□□□□ -0.15
Stra6-201ENSMUST00000034880 Shroom4Q1W617 1475 aa14.14□□□□□ -0.15
Stra6-201ENSMUST00000034880 Ercc6F8VPZ5 1481 aa14.13□□□□□ -0.15
Stra6-201ENSMUST00000034880 3425401B19RikD3Z1D3 1412 aa14.13□□□□□ -0.15
Stra6-201ENSMUST00000034880 Dhx29Q6PGC1 1365 aaKnown RBP14.12□□□□□ -0.15
Stra6-201ENSMUST00000034880 Ankrd26Q811D2 1581 aa14.11□□□□□ -0.15
Stra6-201ENSMUST00000034880 Pcf11G3X9Z4 1553 aa14.11□□□□□ -0.15
Stra6-201ENSMUST00000034880 Map3k1P53349 1493 aa14.11□□□□□ -0.15
Stra6-201ENSMUST00000034880 Wdr43Q6ZQL4 677 aaKnown RBP14.1□□□□□ -0.15
Stra6-201ENSMUST00000034880 Washc2Q6PGL7 1334 aa14.1□□□□□ -0.15
Stra6-201ENSMUST00000034880 Lamc3Q9R0B6 1581 aa14.09□□□□□ -0.15
Stra6-201ENSMUST00000034880 Pelp1Q9DBD5 1123 aaKnown RBP14.08□□□□□ -0.16
Stra6-201ENSMUST00000034880 Erich3F6QRE9 1637 aa14.08□□□□□ -0.16
Stra6-201ENSMUST00000034880 Pak3Q61036 559 aa14.07□□□□□ -0.16
Stra6-201ENSMUST00000034880 P3h3Q8CG70 732 aa14.07□□□□□ -0.16
Stra6-201ENSMUST00000034880 Ankrd36D3Z4K0 1415 aa14.07□□□□□ -0.16
Stra6-201ENSMUST00000034880 Fhad1A6PWD2 1420 aa14.05□□□□□ -0.16
Stra6-201ENSMUST00000034880 Camsap1A2AHC3 1581 aa14.04□□□□□ -0.16
Stra6-201ENSMUST00000034880 Mroh2bQ7M6Y6 1581 aa14.03□□□□□ -0.16
Stra6-201ENSMUST00000034880 Ube2uB1AUC4 352 aa14.03□□□□□ -0.16
Stra6-201ENSMUST00000034880 Ccer2J3QPU5 274 aa14.02□□□□□ -0.16
Stra6-201ENSMUST00000034880 Ncoa2Q61026 1462 aa14.02□□□□□ -0.17
Stra6-201ENSMUST00000034880 Ttbk1Q6PCN3 1308 aa14.02□□□□□ -0.17
Stra6-201ENSMUST00000034880 Mrs2Q5NCE8 434 aa14.01□□□□□ -0.17
Stra6-201ENSMUST00000034880 Liat1Q810M6 228 aa14.01□□□□□ -0.17
Stra6-201ENSMUST00000034880 Mia2Q91ZV0 1396 aa14□□□□□ -0.17
Stra6-201ENSMUST00000034880 Vps8Q0P5W1 1427 aa14□□□□□ -0.17
Stra6-201ENSMUST00000034880 Naip5Q9R016 1403 aa14□□□□□ -0.17
Stra6-201ENSMUST00000034880 Npm1Q61937 292 aaKnown RBP13.98□□□□□ -0.17
Stra6-201ENSMUST00000034880 Grin2bQ01097 1482 aa13.98□□□□□ -0.17
Stra6-201ENSMUST00000034880 Lmo7E9PYF4 1699 aaKnown RBP13.98□□□□□ -0.17
Stra6-201ENSMUST00000034880 CntlnA2AM05 1397 aa13.97□□□□□ -0.17
Stra6-201ENSMUST00000034880 Fyco1Q8VDC1 1437 aa13.97□□□□□ -0.17
Stra6-201ENSMUST00000034880 Slc4a2P13808 1237 aaKnown RBP13.97□□□□□ -0.17
Stra6-201ENSMUST00000034880 Chic2Q9D9G3 165 aa13.97□□□□□ -0.17
Stra6-201ENSMUST00000034880 Slc4a3P16283 1227 aa13.96□□□□□ -0.17
Stra6-201ENSMUST00000034880 Wwc2Q6NXJ0 1187 aa13.96□□□□□ -0.17
Stra6-201ENSMUST00000034880 Egfem1Q8C088 590 aa13.96□□□□□ -0.17
Stra6-201ENSMUST00000034880 Ubl4bQ9CQ84 188 aa13.96□□□□□ -0.17
Stra6-201ENSMUST00000034880 Naip2Q9QUK4 1447 aa13.96□□□□□ -0.17
Stra6-201ENSMUST00000034880 Cux1P53564 1515 aa13.96□□□□□ -0.17
Stra6-201ENSMUST00000034880 Camsap2Q8C1B1 1461 aa13.96□□□□□ -0.18
Stra6-201ENSMUST00000034880 Efcab5A0JP43 1406 aa13.95□□□□□ -0.18
Stra6-201ENSMUST00000034880 Cux2P70298 1426 aa13.93□□□□□ -0.18
Stra6-201ENSMUST00000034880 Gm7298A0A0N4SVU1 1476 aa13.92□□□□□ -0.18
Stra6-201ENSMUST00000034880 Crocc2F6XLV1 1638 aa13.92□□□□□ -0.18
Stra6-201ENSMUST00000034880 Phldb1Q6PDH0 1371 aaKnown RBP13.92□□□□□ -0.18
Stra6-201ENSMUST00000034880 Exoc6Q8R313 802 aa13.92□□□□□ -0.18
Stra6-201ENSMUST00000034880 Dennd4bQ3U1Y4 1499 aa13.91□□□□□ -0.18
Stra6-201ENSMUST00000034880 Unc13aQ4KUS2 1712 aa13.9□□□□□ -0.18
Stra6-201ENSMUST00000034880 A2mQ6GQT1 1474 aa13.9□□□□□ -0.18
Stra6-201ENSMUST00000034880 Hdac5Q9Z2V6 1113 aa13.89□□□□□ -0.19
Stra6-201ENSMUST00000034880 NrdcQ8BHG1 1161 aa13.88□□□□□ -0.19
Stra6-201ENSMUST00000034880 Pprc1Q6NZN1 1644 aa13.87□□□□□ -0.19
Stra6-201ENSMUST00000034880 Gm1043A0A140LJC2 1431 aa13.87□□□□□ -0.19
Stra6-201ENSMUST00000034880 Kcnh8P59111 1102 aa13.86□□□□□ -0.19
Stra6-201ENSMUST00000034880 Aebp1Q640N1 1128 aa13.86□□□□□ -0.19
Stra6-201ENSMUST00000034880 Carmil1Q6EDY6 1374 aa13.86□□□□□ -0.19
Stra6-201ENSMUST00000034880 Cul7Q8VE73 1689 aa13.85□□□□□ -0.19
Stra6-201ENSMUST00000034880 Upf2A2AT37 1269 aaKnown RBP13.84□□□□□ -0.19
Stra6-201ENSMUST00000034880 LrpprcQ6PB66 1392 aaKnown RBP13.84□□□□□ -0.19
Stra6-201ENSMUST00000034880 Urb2E9Q7L1 1524 aaKnown RBP13.83□□□□□ -0.19
Stra6-201ENSMUST00000034880 Gm13695A2AK44 830 aa13.83□□□□□ -0.19
Stra6-201ENSMUST00000034880 Ccdc27Q3V036 639 aa13.83□□□□□ -0.19
Stra6-201ENSMUST00000034880 Peg3Q3URU2 1571 aa13.83□□□□□ -0.2
Stra6-201ENSMUST00000034880 Ncoa1P70365 1447 aa13.82□□□□□ -0.2
Stra6-201ENSMUST00000034880 Mphosph9A6H5Y1 991 aa13.82□□□□□ -0.2
Stra6-201ENSMUST00000034880 Thoc2B1AZI6 1594 aaKnown RBP13.82□□□□□ -0.2
Stra6-201ENSMUST00000034880 Arhgap27A2AB59 869 aa13.82□□□□□ -0.2
Stra6-201ENSMUST00000034880 Ccnb3Q810T2 1396 aa13.8□□□□□ -0.2
Stra6-201ENSMUST00000034880 PnisrA2AJT4 805 aaKnown RBP13.79□□□□□ -0.2
Stra6-201ENSMUST00000034880 Duox2A2AQ99 1517 aa13.78□□□□□ -0.2
Stra6-201ENSMUST00000034880 PogzQ8BZH4 1409 aaKnown RBP13.78□□□□□ -0.2
Stra6-201ENSMUST00000034880 Ipo9Q91YE6 1041 aa13.77□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 130.2 ms