RNA–Protein interactions for RNA: ENSMUST00000034880.9

Stra6-201, Transcript of Receptor for retinol uptake STRA6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stra6, Length 2,993 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6-201ENSMUST00000034880 NischQ80TM9 1593 aa18.24■□□□□ 0.51
Stra6-201ENSMUST00000034880 Abcc9P70170 1546 aa17.68■□□□□ 0.42
Stra6-201ENSMUST00000034880 Gm35339A0A140LHH9 1649 aa17.68■□□□□ 0.42
Stra6-201ENSMUST00000034880 Rhox8Q6VSS7 320 aa17.61■□□□□ 0.41
Stra6-201ENSMUST00000034880 Rtl1Q7M732 1744 aa17.38■□□□□ 0.37
Stra6-201ENSMUST00000034880 Abcc8B2RUS7 1588 aa17.27■□□□□ 0.36
Stra6-201ENSMUST00000034880 Ccdc180J3QNE4 1664 aa17.25■□□□□ 0.35
Stra6-201ENSMUST00000034880 Rpgrip1Q9EPQ2 1331 aa17.23■□□□□ 0.35
Stra6-201ENSMUST00000034880 Acin1Q9JIX8 1338 aaKnown RBP16.91■□□□□ 0.3
Stra6-201ENSMUST00000034880 Ehmt2Q9Z148 1263 aaKnown RBP16.87■□□□□ 0.29
Stra6-201ENSMUST00000034880 Zcchc6Q5BLK4 1491 aaKnown RBP16.81■□□□□ 0.28
Stra6-201ENSMUST00000034880 Pcgf6Q99NA9 353 aa16.58■□□□□ 0.24
Stra6-201ENSMUST00000034880 Dcaf1Q80TR8 1506 aa16.46■□□□□ 0.23
Stra6-201ENSMUST00000034880 HrcG5E8J6 738 aa16.42■□□□□ 0.22
Stra6-201ENSMUST00000034880 Ccdc136Q3TVA9 1136 aa16.31■□□□□ 0.2
Stra6-201ENSMUST00000034880 Supt5hO55201 1082 aaKnown RBP16.22■□□□□ 0.19
Stra6-201ENSMUST00000034880 Trim41Q5NCC3 630 aa16.12■□□□□ 0.17
Stra6-201ENSMUST00000034880 ScribQ80U72 1612 aa16.03■□□□□ 0.16
Stra6-201ENSMUST00000034880 Rb1cc1Q9ESK9 1588 aa16.02■□□□□ 0.16
Stra6-201ENSMUST00000034880 Neurod1Q60867 357 aa16■□□□□ 0.15
Stra6-201ENSMUST00000034880 Zeb1Q64318 1117 aa15.84■□□□□ 0.13
Stra6-201ENSMUST00000034880 Kdm5dQ62240 1548 aa15.82■□□□□ 0.12
Stra6-201ENSMUST00000034880 Cep164Q5DU05 1446 aa15.81■□□□□ 0.12
Stra6-201ENSMUST00000034880 Baz1aO88379 1555 aa15.8■□□□□ 0.12
Stra6-201ENSMUST00000034880 Cngb1E1AZ71 1325 aa15.7■□□□□ 0.1
Stra6-201ENSMUST00000034880 NacadQ5SWP3 1504 aa15.67■□□□□ 0.1
Stra6-201ENSMUST00000034880 Gab3Q8BSM5 595 aa15.66■□□□□ 0.1
Stra6-201ENSMUST00000034880 Sall2Q9QX96 1004 aa15.66■□□□□ 0.1
Stra6-201ENSMUST00000034880 Mier1Q5UAK0 511 aa15.63■□□□□ 0.09
Stra6-201ENSMUST00000034880 Chic1Q8CBW7 227 aa15.6■□□□□ 0.09
Stra6-201ENSMUST00000034880 Las1lA2BE28 776 aaKnown RBP15.59■□□□□ 0.09
Stra6-201ENSMUST00000034880 NefmP08553 848 aa15.58■□□□□ 0.08
Stra6-201ENSMUST00000034880 Rsf1E9PWW9 1441 aaKnown RBP15.54■□□□□ 0.08
Stra6-201ENSMUST00000034880 1700123L14RikQ3V2K7 440 aa15.53■□□□□ 0.08
Stra6-201ENSMUST00000034880 Csrnp3P59055 597 aa15.5■□□□□ 0.07
Stra6-201ENSMUST00000034880 Smarca2Q6DIC0 1577 aa15.49■□□□□ 0.07
Stra6-201ENSMUST00000034880 Anks4bQ8K3X6 423 aa15.45■□□□□ 0.06
Stra6-201ENSMUST00000034880 Crybg2B7ZCC2 1516 aa15.39■□□□□ 0.05
Stra6-201ENSMUST00000034880 Ccdc88bQ4QRL3 1481 aa15.38■□□□□ 0.05
Stra6-201ENSMUST00000034880 Wdr66E9Q743 1299 aa15.35■□□□□ 0.05
Stra6-201ENSMUST00000034880 Aebp2Q9Z248 504 aaKnown RBP15.35■□□□□ 0.05
Stra6-201ENSMUST00000034880 Sycp2Q9CUU3 1500 aa15.32■□□□□ 0.04
Stra6-201ENSMUST00000034880 Ppargc1bQ8VHJ7 1014 aa15.3■□□□□ 0.04
Stra6-201ENSMUST00000034880 UbtfP25976 765 aaKnown RBP15.25■□□□□ 0.03
Stra6-201ENSMUST00000034880 Cdk11bP24788 784 aaKnown RBP15.21■□□□□ 0.03
Stra6-201ENSMUST00000034880 Nop58Q6DFW4 536 aaKnown RBP15.21■□□□□ 0.02
Stra6-201ENSMUST00000034880 Gm38655A0A286YDK6 273 aa15.19■□□□□ 0.02
Stra6-201ENSMUST00000034880 Golga3P55937 1487 aa15.19■□□□□ 0.02
Stra6-201ENSMUST00000034880 Brd4Q9ESU6 1400 aaKnown RBP15.15■□□□□ 0.02
Stra6-201ENSMUST00000034880 Aplp2Q06335 707 aa15.15■□□□□ 0.02
Stra6-201ENSMUST00000034880 ClspnQ80YR7 1315 aa15.15■□□□□ 0.02
Stra6-201ENSMUST00000034880 Cecr2E9Q2Z1 1453 aa15.13■□□□□ 0.01
Stra6-201ENSMUST00000034880 CenpbP27790 599 aa15.11■□□□□ 0.01
Stra6-201ENSMUST00000034880 Esf1Q3V1V3 845 aaKnown RBP15.06■□□□□ 0
Stra6-201ENSMUST00000034880 Synj1Q8CHC4 1574 aa15.06■□□□□ 0
Stra6-201ENSMUST00000034880 TonslQ6NZL6 1363 aa14.98□□□□□ -0.01
Stra6-201ENSMUST00000034880 Myt1Q8CFC2 1127 aa14.96□□□□□ -0.01
Stra6-201ENSMUST00000034880 BicraF8VPZ9 1578 aa14.94□□□□□ -0.02
Stra6-201ENSMUST00000034880 Myt1lP97500 1187 aa14.94□□□□□ -0.02
Stra6-201ENSMUST00000034880 Top2bQ64511 1612 aa14.91□□□□□ -0.02
Stra6-201ENSMUST00000034880 CftrP26361 1476 aa14.89□□□□□ -0.03
Stra6-201ENSMUST00000034880 Rapgef2Q8CHG7 1496 aa14.89□□□□□ -0.03
Stra6-201ENSMUST00000034880 Cc2d2aQ8CFW7 1633 aa14.86□□□□□ -0.03
Stra6-201ENSMUST00000034880 Plekhg3Q4VAC9 1341 aa14.83□□□□□ -0.03
Stra6-201ENSMUST00000034880 SafbD3YXK2 937 aaKnown RBP14.82□□□□□ -0.04
Stra6-201ENSMUST00000034880 Hnrnpul2Q00PI9 745 aaKnown RBP14.81□□□□□ -0.04
Stra6-201ENSMUST00000034880 Mapk8ip2Q9ERE9 830 aa14.8□□□□□ -0.04
Stra6-201ENSMUST00000034880 Cep162Q6ZQ06 1403 aa14.8□□□□□ -0.04
Stra6-201ENSMUST00000034880 Fam71e1A1L3C1 212 aa14.77□□□□□ -0.05
Stra6-201ENSMUST00000034880 Ap3b1Q9Z1T1 1105 aa14.74□□□□□ -0.05
Stra6-201ENSMUST00000034880 Ncapd3Q6ZQK0 1506 aa14.72□□□□□ -0.05
Stra6-201ENSMUST00000034880 Eid3Q3V124 375 aa14.72□□□□□ -0.05
Stra6-201ENSMUST00000034880 Clip1Q922J3 1391 aa14.72□□□□□ -0.05
Stra6-201ENSMUST00000034880 Cttnbp2B9EJA2 1648 aa14.71□□□□□ -0.05
Stra6-201ENSMUST00000034880 Npm2Q80W85 207 aa14.71□□□□□ -0.05
Stra6-201ENSMUST00000034880 Top2aQ01320 1528 aaKnown RBP14.7□□□□□ -0.06
Stra6-201ENSMUST00000034880 Smarca4Q3TKT4 1613 aaKnown RBP14.67□□□□□ -0.06
Stra6-201ENSMUST00000034880 Fmn1Q05860 1466 aa14.66□□□□□ -0.06
Stra6-201ENSMUST00000034880 DiexfQ8BTT6 772 aaKnown RBP14.63□□□□□ -0.07
Stra6-201ENSMUST00000034880 Tnnt3Q9QZ47 272 aa14.61□□□□□ -0.07
Stra6-201ENSMUST00000034880 Bcl11aQ9QYE3 773 aa14.59□□□□□ -0.07
Stra6-201ENSMUST00000034880 Eif4g1Q6NZJ6 1600 aaKnown RBP14.53□□□□□ -0.08
Stra6-201ENSMUST00000034880 Kdm5bQ80Y84 1544 aa14.52□□□□□ -0.09
Stra6-201ENSMUST00000034880 Znf710Q3U288 666 aa14.49□□□□□ -0.09
Stra6-201ENSMUST00000034880 Iqgap2Q3UQ44 1575 aa14.48□□□□□ -0.09
Stra6-201ENSMUST00000034880 Rpap1Q80TE0 1409 aa14.48□□□□□ -0.09
Stra6-201ENSMUST00000034880 Arap1Q4LDD4 1452 aa14.47□□□□□ -0.09
Stra6-201ENSMUST00000034880 Anp32aO35381 247 aa14.43□□□□□ -0.1
Stra6-201ENSMUST00000034880 Ifnlr1Q8CGK5 535 aa14.42□□□□□ -0.1
Stra6-201ENSMUST00000034880 Arhgap35Q91YM2 1499 aa14.42□□□□□ -0.1
Stra6-201ENSMUST00000034880 Atad2bE9Q166 1460 aaKnown RBP14.41□□□□□ -0.1
Stra6-201ENSMUST00000034880 Nolc1E9Q5C9 702 aaKnown RBP14.4□□□□□ -0.1
Stra6-201ENSMUST00000034880 Eea1Q8BL66 1411 aa14.4□□□□□ -0.11
Stra6-201ENSMUST00000034880 NclP09405 707 aaKnown RBP14.39□□□□□ -0.11
Stra6-201ENSMUST00000034880 PtprkP35822 1457 aa14.37□□□□□ -0.11
Stra6-201ENSMUST00000034880 Baz1bQ9Z277 1479 aa14.37□□□□□ -0.11
Stra6-201ENSMUST00000034880 Il27Q8K3I6 234 aa14.36□□□□□ -0.11
Stra6-201ENSMUST00000034880 Arhgef5E9Q7D5 1581 aa14.36□□□□□ -0.11
Stra6-201ENSMUST00000034880 Setd5Q5XJV7 1441 aa14.35□□□□□ -0.11
Stra6-201ENSMUST00000034880 Pds5bQ4VA53 1446 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 126.8 ms