RNA–Protein interactions for RNA: ENSMUST00000030439.14

Rnf220-201, Transcript of E3 ubiquitin-protein ligase Rnf220, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Rnf220, Length 3,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220-201ENSMUST00000030439 Gm38655A0A286YDK6 273 aa16.81■□□□□ 0.28
Rnf220-201ENSMUST00000030439 Pbrm1Q8BSQ9 1634 aaKnown RBP16.81■□□□□ 0.28
Rnf220-201ENSMUST00000030439 Ap3b1Q9Z1T1 1105 aa16.81■□□□□ 0.28
Rnf220-201ENSMUST00000030439 TonslQ6NZL6 1363 aa16.78■□□□□ 0.28
Rnf220-201ENSMUST00000030439 ClspnQ80YR7 1315 aa16.78■□□□□ 0.28
Rnf220-201ENSMUST00000030439 Rapgef2Q8CHG7 1496 aa16.77■□□□□ 0.28
Rnf220-201ENSMUST00000030439 Samd9lQ69Z37 1561 aa16.77■□□□□ 0.28
Rnf220-201ENSMUST00000030439 PtprkP35822 1457 aa16.76■□□□□ 0.27
Rnf220-201ENSMUST00000030439 Cep162Q6ZQ06 1403 aa16.76■□□□□ 0.27
Rnf220-201ENSMUST00000030439 Eid3Q3V124 375 aa16.75■□□□□ 0.27
Rnf220-201ENSMUST00000030439 Clip1Q922J3 1391 aa16.73■□□□□ 0.27
Rnf220-201ENSMUST00000030439 Disp1Q3TDN0 1521 aa16.71■□□□□ 0.27
Rnf220-201ENSMUST00000030439 CenpbP27790 599 aa16.71■□□□□ 0.27
Rnf220-201ENSMUST00000030439 Eif4g1Q6NZJ6 1600 aaKnown RBP16.68■□□□□ 0.26
Rnf220-201ENSMUST00000030439 Rusc2Q80U22 1514 aa16.67■□□□□ 0.26
Rnf220-201ENSMUST00000030439 Nup160Q9Z0W3 1402 aaKnown RBP16.67■□□□□ 0.26
Rnf220-201ENSMUST00000030439 SynmQ70IV5 1561 aa16.65■□□□□ 0.26
Rnf220-201ENSMUST00000030439 Mapk8ip2Q9ERE9 830 aa16.64■□□□□ 0.25
Rnf220-201ENSMUST00000030439 Mroh2bQ7M6Y6 1581 aa16.63■□□□□ 0.25
Rnf220-201ENSMUST00000030439 Cc2d2bA0A286YDU8 1405 aa16.63■□□□□ 0.25
Rnf220-201ENSMUST00000030439 Magi3Q9EQJ9 1476 aa16.62■□□□□ 0.25
Rnf220-201ENSMUST00000030439 Map3k1P53349 1493 aa16.62■□□□□ 0.25
Rnf220-201ENSMUST00000030439 Setd1bQ8CFT2 1985 aa16.61■□□□□ 0.25
Rnf220-201ENSMUST00000030439 Rad54l2Q99NG0 1466 aa16.61■□□□□ 0.25
Rnf220-201ENSMUST00000030439 Grin2aP35436 1464 aa16.6■□□□□ 0.25
Rnf220-201ENSMUST00000030439 Myt1Q8CFC2 1127 aa16.57■□□□□ 0.24
Rnf220-201ENSMUST00000030439 Arhgap35Q91YM2 1499 aa16.57■□□□□ 0.24
Rnf220-201ENSMUST00000030439 AqrQ8CFQ3 1481 aaKnown RBP16.56■□□□□ 0.24
Rnf220-201ENSMUST00000030439 Pla2r1Q62028 1487 aa16.55■□□□□ 0.24
Rnf220-201ENSMUST00000030439 Carmil1Q6EDY6 1374 aa16.5■□□□□ 0.23
Rnf220-201ENSMUST00000030439 Aplp2Q06335 707 aa16.47■□□□□ 0.23
Rnf220-201ENSMUST00000030439 Shroom2A2ALU4 1481 aa16.45■□□□□ 0.22
Rnf220-201ENSMUST00000030439 Fam50aQ9WV03 339 aaKnown RBP16.43■□□□□ 0.22
Rnf220-201ENSMUST00000030439 Polr1aO35134 1717 aaKnown RBP16.43■□□□□ 0.22
Rnf220-201ENSMUST00000030439 Adamts12Q811B3 1600 aa16.42■□□□□ 0.22
Rnf220-201ENSMUST00000030439 EprsQ8CGC7 1512 aaKnown RBP16.42■□□□□ 0.22
Rnf220-201ENSMUST00000030439 Lmod2Q3UHZ5 550 aa16.42■□□□□ 0.22
Rnf220-201ENSMUST00000030439 Ncapd3Q6ZQK0 1506 aa16.41■□□□□ 0.22
Rnf220-201ENSMUST00000030439 Rpap1Q80TE0 1409 aa16.4■□□□□ 0.22
Rnf220-201ENSMUST00000030439 TchhA0A0B4J1F9 1599 aa16.38■□□□□ 0.21
Rnf220-201ENSMUST00000030439 DiexfQ8BTT6 772 aaKnown RBP16.38■□□□□ 0.21
Rnf220-201ENSMUST00000030439 Setd5Q5XJV7 1441 aa16.38■□□□□ 0.21
Rnf220-201ENSMUST00000030439 SafbD3YXK2 937 aaKnown RBP16.37■□□□□ 0.21
Rnf220-201ENSMUST00000030439 Fgd6Q69ZL1 1399 aa16.36■□□□□ 0.21
Rnf220-201ENSMUST00000030439 Hnrnpul2Q00PI9 745 aaKnown RBP16.36■□□□□ 0.21
Rnf220-201ENSMUST00000030439 Abca16E9PWJ7 1678 aa16.35■□□□□ 0.21
Rnf220-201ENSMUST00000030439 WizO88286 1684 aaKnown RBP16.34■□□□□ 0.21
Rnf220-201ENSMUST00000030439 Eea1Q8BL66 1411 aa16.34■□□□□ 0.21
Rnf220-201ENSMUST00000030439 Arap1Q4LDD4 1452 aa16.34■□□□□ 0.21
Rnf220-201ENSMUST00000030439 NclP09405 707 aaKnown RBP16.31■□□□□ 0.2
Rnf220-201ENSMUST00000030439 CadpsQ80TJ1 1355 aa16.31■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Abcc2Q8VI47 1543 aa16.3■□□□□ 0.2
Rnf220-201ENSMUST00000030439 PxdnQ3UQ28 1475 aa16.3■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Fyco1Q8VDC1 1437 aa16.3■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Map3k4O08648 1597 aa16.29■□□□□ 0.2
Rnf220-201ENSMUST00000030439 BlmO88700 1416 aa16.29■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Gm7298A0A0N4SVU1 1476 aa16.29■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Soga1E1U8D0 1418 aa16.28■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Cux1P53564 1515 aa16.28■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Erich3F6QRE9 1637 aa16.28■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Abca5Q8K448 1642 aa16.28■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Dnmt1P13864 1620 aaKnown RBP16.27■□□□□ 0.2
Rnf220-201ENSMUST00000030439 Pabpn1Q8CCS6 302 aaKnown RBP16.27■□□□□ 0.19
Rnf220-201ENSMUST00000030439 Ankrd26Q811D2 1581 aa16.25■□□□□ 0.19
Rnf220-201ENSMUST00000030439 Ube2uB1AUC4 352 aa16.21■□□□□ 0.19
Rnf220-201ENSMUST00000030439 Slc24a1Q91WD8 1130 aa16.21■□□□□ 0.19
Rnf220-201ENSMUST00000030439 Bcl11aQ9QYE3 773 aa16.21■□□□□ 0.18
Rnf220-201ENSMUST00000030439 Slx4Q6P1D7 1565 aa16.2■□□□□ 0.18
Rnf220-201ENSMUST00000030439 Arhgap27A2AB59 869 aa16.19■□□□□ 0.18
Rnf220-201ENSMUST00000030439 Abcc1O35379 1528 aa16.18■□□□□ 0.18
Rnf220-201ENSMUST00000030439 BC005561E9Q5E2 1589 aa16.18■□□□□ 0.18
Rnf220-201ENSMUST00000030439 AknaQ80VW7 1404 aa16.17■□□□□ 0.18
Rnf220-201ENSMUST00000030439 Hspa5P20029 655 aaKnown RBP16.17■□□□□ 0.18
Rnf220-201ENSMUST00000030439 Arhgef5E9Q7D5 1581 aa16.15■□□□□ 0.18
Rnf220-201ENSMUST00000030439 Neo1P97798 1493 aa16.15■□□□□ 0.18
Rnf220-201ENSMUST00000030439 Lmo7E9PYF4 1699 aaKnown RBP16.14■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Fam71e1A1L3C1 212 aa16.13■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Zcchc11B2RX14 1644 aaKnown RBP16.13■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Chd1P40201 1711 aa16.12■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Pelp1Q9DBD5 1123 aaKnown RBP16.11■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Gm14025A2AP89 1413 aa16.11■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Col17a1Q07563 1470 aa16.1■□□□□ 0.17
Rnf220-201ENSMUST00000030439 WrnO09053 1401 aa16.1■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Naip1Q9QWK5 1403 aa16.1■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Kdm5bQ80Y84 1544 aa16.09■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Arhgef12Q8R4H2 1543 aaKnown RBP16.08■□□□□ 0.17
Rnf220-201ENSMUST00000030439 Gapvd1Q6PAR5 1458 aa16.08■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Rrbp1Q99PL5 1605 aaKnown RBP16.08■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Sin3aQ60520 1274 aaKnown RBP16.07■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Pcf11G3X9Z4 1553 aa16.07■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Chic2Q9D9G3 165 aa16.07■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Peg3Q3URU2 1571 aa16.06■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Aebp1Q640N1 1128 aa16.06■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Jph4Q80WT0 628 aa16.06■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Tnnt3Q9QZ47 272 aa16.05■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Cep170Q6A065 1588 aa16.04■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Ythdc2B2RR83 1445 aaKnown RBP16.03■□□□□ 0.16
Rnf220-201ENSMUST00000030439 CntlnA2AM05 1397 aa16.02■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Tiam1Q60610 1591 aa16.02■□□□□ 0.16
Rnf220-201ENSMUST00000030439 Znf710Q3U288 666 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 82.9 ms