RNA–Protein interactions for RNA: ENSMUST00000029422.13

Shox2-201, Transcript of Short stature homeobox protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shox2, Length 3,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-201ENSMUST00000029422 Kdm5bQ80Y84 1544 aa27.94■■■□□ 2.06
Shox2-201ENSMUST00000029422 Hspa5P20029 655 aaKnown RBP27.9■■■□□ 2.06
Shox2-201ENSMUST00000029422 Ifnlr1Q8CGK5 535 aa27.88■■■□□ 2.05
Shox2-201ENSMUST00000029422 Ccdc18Q640L5 1455 aa27.86■■■□□ 2.05
Shox2-201ENSMUST00000029422 Arhgef5E9Q7D5 1581 aa27.84■■■□□ 2.05
Shox2-201ENSMUST00000029422 Ube2uB1AUC4 352 aa27.83■■■□□ 2.05
Shox2-201ENSMUST00000029422 Eif5bQ05D44 1216 aaKnown RBP27.82■■■□□ 2.04
Shox2-201ENSMUST00000029422 Sin3aQ60520 1274 aaKnown RBP27.79■■■□□ 2.04
Shox2-201ENSMUST00000029422 Iqgap2Q3UQ44 1575 aa27.77■■■□□ 2.04
Shox2-201ENSMUST00000029422 AqrQ8CFQ3 1481 aaKnown RBP27.71■■■□□ 2.03
Shox2-201ENSMUST00000029422 Ppp4r2Q0VGB7 417 aa27.69■■■□□ 2.02
Shox2-201ENSMUST00000029422 Gm13697A2AK42 830 aa27.67■■■□□ 2.02
Shox2-201ENSMUST00000029422 Naip1Q9QWK5 1403 aa27.66■■■□□ 2.02
Shox2-201ENSMUST00000029422 Supt16hQ920B9 1047 aa27.64■■■□□ 2.02
Shox2-201ENSMUST00000029422 NrkQ9R0G8 1455 aa27.63■■■□□ 2.01
Shox2-201ENSMUST00000029422 Tiam1Q60610 1591 aa27.63■■■□□ 2.01
Shox2-201ENSMUST00000029422 P3h3Q8CG70 732 aa27.56■■■□□ 2
Shox2-201ENSMUST00000029422 Pelp1Q9DBD5 1123 aaKnown RBP27.56■■■□□ 2
Shox2-201ENSMUST00000029422 Kif15Q6P9L6 1387 aa27.54■■■□□ 2
Shox2-201ENSMUST00000029422 PrkcshO08795 521 aa27.51■■□□□ 1.99
Shox2-201ENSMUST00000029422 Wdr43Q6ZQL4 677 aaKnown RBP27.5■■□□□ 1.99
Shox2-201ENSMUST00000029422 Rtl5Q5DTT4 599 aa27.49■■□□□ 1.99
Shox2-201ENSMUST00000029422 Shroom4Q1W617 1475 aa27.49■■□□□ 1.99
Shox2-201ENSMUST00000029422 TchhA0A0B4J1F9 1599 aa27.49■■□□□ 1.99
Shox2-201ENSMUST00000029422 Ttbk1Q6PCN3 1308 aa27.48■■□□□ 1.99
Shox2-201ENSMUST00000029422 Chic2Q9D9G3 165 aa27.48■■□□□ 1.99
Shox2-201ENSMUST00000029422 Smg6P61406 1418 aaKnown RBP27.48■■□□□ 1.99
Shox2-201ENSMUST00000029422 UacaQ8CGB3 1411 aa27.47■■□□□ 1.99
Shox2-201ENSMUST00000029422 TnnQ80Z71 1560 aa27.47■■□□□ 1.99
Shox2-201ENSMUST00000029422 Slx4Q6P1D7 1565 aa27.45■■□□□ 1.98
Shox2-201ENSMUST00000029422 Mrs2Q5NCE8 434 aa27.43■■□□□ 1.98
Shox2-201ENSMUST00000029422 Ccer2J3QPU5 274 aa27.42■■□□□ 1.98
Shox2-201ENSMUST00000029422 3425401B19RikD3Z1D3 1412 aa27.42■■□□□ 1.98
Shox2-201ENSMUST00000029422 Dhx29Q6PGC1 1365 aaKnown RBP27.41■■□□□ 1.98
Shox2-201ENSMUST00000029422 Atad2bE9Q166 1460 aaKnown RBP27.37■■□□□ 1.97
Shox2-201ENSMUST00000029422 Pcf11G3X9Z4 1553 aa27.36■■□□□ 1.97
Shox2-201ENSMUST00000029422 Map3k1P53349 1493 aa27.35■■□□□ 1.97
Shox2-201ENSMUST00000029422 Pak3Q61036 559 aa27.34■■□□□ 1.97
Shox2-201ENSMUST00000029422 Wwc2Q6NXJ0 1187 aa27.34■■□□□ 1.97
Shox2-201ENSMUST00000029422 Ankrd26Q811D2 1581 aa27.34■■□□□ 1.97
Shox2-201ENSMUST00000029422 Mia2Q91ZV0 1396 aa27.31■■□□□ 1.96
Shox2-201ENSMUST00000029422 Mroh2bQ7M6Y6 1581 aa27.31■■□□□ 1.96
Shox2-201ENSMUST00000029422 Ankrd36D3Z4K0 1415 aa27.3■■□□□ 1.96
Shox2-201ENSMUST00000029422 Slc4a3P16283 1227 aa27.3■■□□□ 1.96
Shox2-201ENSMUST00000029422 Washc2Q6PGL7 1334 aa27.29■■□□□ 1.96
Shox2-201ENSMUST00000029422 Fhad1A6PWD2 1420 aa27.29■■□□□ 1.96
Shox2-201ENSMUST00000029422 NrdcQ8BHG1 1161 aa27.29■■□□□ 1.96
Shox2-201ENSMUST00000029422 CntlnA2AM05 1397 aa27.25■■□□□ 1.95
Shox2-201ENSMUST00000029422 Fyco1Q8VDC1 1437 aa27.23■■□□□ 1.95
Shox2-201ENSMUST00000029422 Camsap1A2AHC3 1581 aa27.22■■□□□ 1.95
Shox2-201ENSMUST00000029422 Slc4a2P13808 1237 aaKnown RBP27.2■■□□□ 1.94
Shox2-201ENSMUST00000029422 Frmpd1A2AKB4 1549 aa27.19■■□□□ 1.94
Shox2-201ENSMUST00000029422 Vps8Q0P5W1 1427 aa27.18■■□□□ 1.94
Shox2-201ENSMUST00000029422 Aebp1Q640N1 1128 aa27.17■■□□□ 1.94
Shox2-201ENSMUST00000029422 Exoc6Q8R313 802 aa27.17■■□□□ 1.94
Shox2-201ENSMUST00000029422 Erich3F6QRE9 1637 aa27.16■■□□□ 1.94
Shox2-201ENSMUST00000029422 Lamc3Q9R0B6 1581 aa27.16■■□□□ 1.94
Shox2-201ENSMUST00000029422 Grin2bQ01097 1482 aa27.16■■□□□ 1.94
Shox2-201ENSMUST00000029422 Pds5bQ4VA53 1446 aaKnown RBP27.14■■□□□ 1.94
Shox2-201ENSMUST00000029422 Cux1P53564 1515 aa27.13■■□□□ 1.93
Shox2-201ENSMUST00000029422 Naip5Q9R016 1403 aa27.12■■□□□ 1.93
Shox2-201ENSMUST00000029422 Liat1Q810M6 228 aa27.12■■□□□ 1.93
Shox2-201ENSMUST00000029422 Naip2Q9QUK4 1447 aa27.11■■□□□ 1.93
Shox2-201ENSMUST00000029422 Npm1Q61937 292 aaKnown RBP27.07■■□□□ 1.92
Shox2-201ENSMUST00000029422 Ncoa2Q61026 1462 aa27.07■■□□□ 1.92
Shox2-201ENSMUST00000029422 Efcab5A0JP43 1406 aa27.06■■□□□ 1.92
Shox2-201ENSMUST00000029422 Gm7298A0A0N4SVU1 1476 aa27.05■■□□□ 1.92
Shox2-201ENSMUST00000029422 Mphosph9A6H5Y1 991 aa27.04■■□□□ 1.92
Shox2-201ENSMUST00000029422 Carmil1Q6EDY6 1374 aa27.04■■□□□ 1.92
Shox2-201ENSMUST00000029422 Lmo7E9PYF4 1699 aaKnown RBP27■■□□□ 1.91
Shox2-201ENSMUST00000029422 Kcnh8P59111 1102 aa27■■□□□ 1.91
Shox2-201ENSMUST00000029422 A2mQ6GQT1 1474 aa27■■□□□ 1.91
Shox2-201ENSMUST00000029422 Wdr62Q3U3T8 1523 aa26.98■■□□□ 1.91
Shox2-201ENSMUST00000029422 Egfem1Q8C088 590 aa26.97■■□□□ 1.91
Shox2-201ENSMUST00000029422 Ccnb3Q810T2 1396 aa26.96■■□□□ 1.91
Shox2-201ENSMUST00000029422 Gm13695A2AK44 830 aa26.95■■□□□ 1.9
Shox2-201ENSMUST00000029422 Ofd1Q80Z25 1017 aa26.94■■□□□ 1.9
Shox2-201ENSMUST00000029422 Camsap2Q8C1B1 1461 aa26.92■■□□□ 1.9
Shox2-201ENSMUST00000029422 Gm1043A0A140LJC2 1431 aa26.91■■□□□ 1.9
Shox2-201ENSMUST00000029422 Zfp644E9QA22 1323 aa26.91■■□□□ 1.9
Shox2-201ENSMUST00000029422 Crocc2F6XLV1 1638 aa26.9■■□□□ 1.9
Shox2-201ENSMUST00000029422 Pkd2O35245 966 aa26.88■■□□□ 1.89
Shox2-201ENSMUST00000029422 Ccdc27Q3V036 639 aa26.88■■□□□ 1.89
Shox2-201ENSMUST00000029422 Dennd4bQ3U1Y4 1499 aa26.86■■□□□ 1.89
Shox2-201ENSMUST00000029422 Hdac5Q9Z2V6 1113 aa26.86■■□□□ 1.89
Shox2-201ENSMUST00000029422 Urb2E9Q7L1 1524 aaKnown RBP26.85■■□□□ 1.89
Shox2-201ENSMUST00000029422 Usp47Q8BY87 1376 aa26.85■■□□□ 1.89
Shox2-201ENSMUST00000029422 Upf2A2AT37 1269 aaKnown RBP26.84■■□□□ 1.89
Shox2-201ENSMUST00000029422 Cabp1Q9JLK7 227 aa26.84■■□□□ 1.89
Shox2-201ENSMUST00000029422 Arhgap27A2AB59 869 aa26.83■■□□□ 1.89
Shox2-201ENSMUST00000029422 PnisrA2AJT4 805 aaKnown RBP26.83■■□□□ 1.89
Shox2-201ENSMUST00000029422 Cux2P70298 1426 aa26.8■■□□□ 1.88
Shox2-201ENSMUST00000029422 Ncoa1P70365 1447 aa26.8■■□□□ 1.88
Shox2-201ENSMUST00000029422 Ercc6F8VPZ5 1481 aa26.78■■□□□ 1.88
Shox2-201ENSMUST00000029422 Ubl4bQ9CQ84 188 aa26.77■■□□□ 1.88
Shox2-201ENSMUST00000029422 L3mbtl2P59178 703 aa26.77■■□□□ 1.88
Shox2-201ENSMUST00000029422 Rgl3Q3UYI5 709 aa26.77■■□□□ 1.88
Shox2-201ENSMUST00000029422 Ipo9Q91YE6 1041 aa26.75■■□□□ 1.87
Shox2-201ENSMUST00000029422 Pprc1Q6NZN1 1644 aa26.73■■□□□ 1.87
Shox2-201ENSMUST00000029422 Tcerg1Q8CGF7 1100 aaKnown RBP26.72■■□□□ 1.87
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms