RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Kif21aQ9QXL2 1672 aa27.29■■□□□ 1.96
Chmp6-201ENSMUST00000026434 Fyco1Q8VDC1 1437 aa27.28■■□□□ 1.96
Chmp6-201ENSMUST00000026434 Tiam1Q60610 1591 aa27.28■■□□□ 1.96
Chmp6-201ENSMUST00000026434 CntlnA2AM05 1397 aa27.28■■□□□ 1.96
Chmp6-201ENSMUST00000026434 Naip1Q9QWK5 1403 aa27.21■■□□□ 1.95
Chmp6-201ENSMUST00000026434 Ncapd3Q6ZQK0 1506 aa27.19■■□□□ 1.94
Chmp6-201ENSMUST00000026434 Urb2E9Q7L1 1524 aaKnown RBP27.17■■□□□ 1.94
Chmp6-201ENSMUST00000026434 Cux1P53564 1515 aa27.17■■□□□ 1.94
Chmp6-201ENSMUST00000026434 Lmo7E9PYF4 1699 aaKnown RBP27.16■■□□□ 1.94
Chmp6-201ENSMUST00000026434 Rad54l2Q99NG0 1466 aa27.14■■□□□ 1.93
Chmp6-201ENSMUST00000026434 Pcf11G3X9Z4 1553 aa27.12■■□□□ 1.93
Chmp6-201ENSMUST00000026434 BlmO88700 1416 aa27.11■■□□□ 1.93
Chmp6-201ENSMUST00000026434 Peg3Q3URU2 1571 aa27.1■■□□□ 1.93
Chmp6-201ENSMUST00000026434 Ap3b1Q9Z1T1 1105 aa27.09■■□□□ 1.93
Chmp6-201ENSMUST00000026434 Plb1Q3TTY0 1478 aa27.09■■□□□ 1.93
Chmp6-201ENSMUST00000026434 Ift140E9PY46 1464 aa27.07■■□□□ 1.92
Chmp6-201ENSMUST00000026434 EprsQ8CGC7 1512 aaKnown RBP27.07■■□□□ 1.92
Chmp6-201ENSMUST00000026434 Aebp1Q640N1 1128 aa27.05■■□□□ 1.92
Chmp6-201ENSMUST00000026434 Pla2r1Q62028 1487 aa27.05■■□□□ 1.92
Chmp6-201ENSMUST00000026434 Gpatch8A2A6A1 1505 aa27.05■■□□□ 1.92
Chmp6-201ENSMUST00000026434 Disp1Q3TDN0 1521 aa27.05■■□□□ 1.92
Chmp6-201ENSMUST00000026434 Magi3Q9EQJ9 1476 aa27.04■■□□□ 1.92
Chmp6-201ENSMUST00000026434 Grin2aP35436 1464 aa27.01■■□□□ 1.91
Chmp6-201ENSMUST00000026434 Pbrm1Q8BSQ9 1634 aaKnown RBP27■■□□□ 1.91
Chmp6-201ENSMUST00000026434 Pcgf6Q99NA9 353 aa26.97■■□□□ 1.91
Chmp6-201ENSMUST00000026434 CadpsQ80TJ1 1355 aa26.96■■□□□ 1.91
Chmp6-201ENSMUST00000026434 TchhA0A0B4J1F9 1599 aa26.95■■□□□ 1.9
Chmp6-201ENSMUST00000026434 Slx4Q6P1D7 1565 aa26.95■■□□□ 1.9
Chmp6-201ENSMUST00000026434 Nup160Q9Z0W3 1402 aaKnown RBP26.92■■□□□ 1.9
Chmp6-201ENSMUST00000026434 Gm7298A0A0N4SVU1 1476 aa26.9■■□□□ 1.9
Chmp6-201ENSMUST00000026434 Adamts12Q811B3 1600 aa26.89■■□□□ 1.9
Chmp6-201ENSMUST00000026434 Abca5Q8K448 1642 aa26.88■■□□□ 1.89
Chmp6-201ENSMUST00000026434 Las1lA2BE28 776 aaKnown RBP26.87■■□□□ 1.89
Chmp6-201ENSMUST00000026434 Soga1E1U8D0 1418 aa26.86■■□□□ 1.89
Chmp6-201ENSMUST00000026434 Cc2d2bA0A286YDU8 1405 aa26.86■■□□□ 1.89
Chmp6-201ENSMUST00000026434 Gm1043A0A140LJC2 1431 aa26.82■■□□□ 1.88
Chmp6-201ENSMUST00000026434 Kdm5bQ80Y84 1544 aa26.76■■□□□ 1.87
Chmp6-201ENSMUST00000026434 Lrriq1Q0P5X1 1673 aa26.74■■□□□ 1.87
Chmp6-201ENSMUST00000026434 Ccer2J3QPU5 274 aa26.74■■□□□ 1.87
Chmp6-201ENSMUST00000026434 Kif27Q7M6Z4 1394 aa26.73■■□□□ 1.87
Chmp6-201ENSMUST00000026434 Mia2Q91ZV0 1396 aa26.73■■□□□ 1.87
Chmp6-201ENSMUST00000026434 WizO88286 1684 aaKnown RBP26.72■■□□□ 1.87
Chmp6-201ENSMUST00000026434 TonslQ6NZL6 1363 aa26.71■■□□□ 1.87
Chmp6-201ENSMUST00000026434 Lmod2Q3UHZ5 550 aa26.71■■□□□ 1.87
Chmp6-201ENSMUST00000026434 Lmtk2Q3TYD6 1471 aa26.68■■□□□ 1.86
Chmp6-201ENSMUST00000026434 Supt5hO55201 1082 aaKnown RBP26.67■■□□□ 1.86
Chmp6-201ENSMUST00000026434 Setd1bQ8CFT2 1985 aa26.66■■□□□ 1.86
Chmp6-201ENSMUST00000026434 Fhad1A6PWD2 1420 aa26.64■■□□□ 1.86
Chmp6-201ENSMUST00000026434 3425401B19RikD3Z1D3 1412 aa26.64■■□□□ 1.86
Chmp6-201ENSMUST00000026434 Dnajc5P60904 198 aa26.62■■□□□ 1.85
Chmp6-201ENSMUST00000026434 PxdnQ3UQ28 1475 aa26.61■■□□□ 1.85
Chmp6-201ENSMUST00000026434 Abca16E9PWJ7 1678 aa26.6■■□□□ 1.85
Chmp6-201ENSMUST00000026434 WrnO09053 1401 aa26.55■■□□□ 1.84
Chmp6-201ENSMUST00000026434 Vps8Q0P5W1 1427 aa26.55■■□□□ 1.84
Chmp6-201ENSMUST00000026434 Ccnb3Q810T2 1396 aa26.54■■□□□ 1.84
Chmp6-201ENSMUST00000026434 Naip2Q9QUK4 1447 aa26.52■■□□□ 1.84
Chmp6-201ENSMUST00000026434 Rusc2Q80U22 1514 aa26.51■■□□□ 1.83
Chmp6-201ENSMUST00000026434 Arhgap27A2AB59 869 aa26.5■■□□□ 1.83
Chmp6-201ENSMUST00000026434 Fam50aQ9WV03 339 aaKnown RBP26.5■■□□□ 1.83
Chmp6-201ENSMUST00000026434 Shroom2A2ALU4 1481 aa26.49■■□□□ 1.83
Chmp6-201ENSMUST00000026434 Abcc2Q8VI47 1543 aa26.48■■□□□ 1.83
Chmp6-201ENSMUST00000026434 UacaQ8CGB3 1411 aa26.47■■□□□ 1.83
Chmp6-201ENSMUST00000026434 Gcc2Q8CHG3 1679 aa26.46■■□□□ 1.83
Chmp6-201ENSMUST00000026434 Ankrd36D3Z4K0 1415 aa26.46■■□□□ 1.83
Chmp6-201ENSMUST00000026434 Eif4g3Q80XI3 1579 aaKnown RBP26.45■■□□□ 1.82
Chmp6-201ENSMUST00000026434 Rapgef6Q5NCJ1 1609 aa26.45■■□□□ 1.82
Chmp6-201ENSMUST00000026434 Dhx57Q6P5D3 1388 aaKnown RBP26.44■■□□□ 1.82
Chmp6-201ENSMUST00000026434 Mug1P28665 1476 aa26.42■■□□□ 1.82
Chmp6-201ENSMUST00000026434 Ncoa2Q61026 1462 aa26.42■■□□□ 1.82
Chmp6-201ENSMUST00000026434 NexmifQ5DTT1 1515 aa26.41■■□□□ 1.82
Chmp6-201ENSMUST00000026434 A2mQ6GQT1 1474 aa26.41■■□□□ 1.82
Chmp6-201ENSMUST00000026434 BC005561E9Q5E2 1589 aa26.4■■□□□ 1.82
Chmp6-201ENSMUST00000026434 Fam163aQ8CAA5 168 aa26.38■■□□□ 1.81
Chmp6-201ENSMUST00000026434 Map3k4O08648 1597 aa26.38■■□□□ 1.81
Chmp6-201ENSMUST00000026434 ClspnQ80YR7 1315 aa26.38■■□□□ 1.81
Chmp6-201ENSMUST00000026434 Rfx7F8VPJ6 1459 aa26.35■■□□□ 1.81
Chmp6-201ENSMUST00000026434 Sall2Q9QX96 1004 aa26.35■■□□□ 1.81
Chmp6-201ENSMUST00000026434 Ncoa3O09000 1398 aa26.34■■□□□ 1.81
Chmp6-201ENSMUST00000026434 Arhgef11Q68FM7 1552 aa26.3■■□□□ 1.8
Chmp6-201ENSMUST00000026434 Arhgap31A6X8Z5 1425 aa26.29■■□□□ 1.8
Chmp6-201ENSMUST00000026434 Fgd6Q69ZL1 1399 aa26.29■■□□□ 1.8
Chmp6-201ENSMUST00000026434 Kiaa1551Q5DTW7 1521 aa26.28■■□□□ 1.8
Chmp6-201ENSMUST00000026434 Cdk11bP24788 784 aaKnown RBP26.28■■□□□ 1.8
Chmp6-201ENSMUST00000026434 Wdr66E9Q743 1299 aa26.27■■□□□ 1.8
Chmp6-201ENSMUST00000026434 Dnmt1P13864 1620 aaKnown RBP26.26■■□□□ 1.79
Chmp6-201ENSMUST00000026434 Fhod3Q76LL6 1578 aa26.26■■□□□ 1.79
Chmp6-201ENSMUST00000026434 Aebp2Q9Z248 504 aaKnown RBP26.25■■□□□ 1.79
Chmp6-201ENSMUST00000026434 Magi1Q6RHR9 1471 aa26.24■■□□□ 1.79
Chmp6-201ENSMUST00000026434 Jph4Q80WT0 628 aa26.24■■□□□ 1.79
Chmp6-201ENSMUST00000026434 Ccdc141E9Q8Q6 1531 aa26.23■■□□□ 1.79
Chmp6-201ENSMUST00000026434 Mapkbp1Q6NS57 1503 aa26.23■■□□□ 1.79
Chmp6-201ENSMUST00000026434 NclP09405 707 aaKnown RBP26.22■■□□□ 1.79
Chmp6-201ENSMUST00000026434 Eid3Q3V124 375 aa26.21■■□□□ 1.79
Chmp6-201ENSMUST00000026434 Il16O54824 1322 aa26.2■■□□□ 1.79
Chmp6-201ENSMUST00000026434 Rrbp1Q99PL5 1605 aaKnown RBP26.2■■□□□ 1.78
Chmp6-201ENSMUST00000026434 Plekhh2Q8C115 1491 aa26.18■■□□□ 1.78
Chmp6-201ENSMUST00000026434 Cdc42bpaQ3UU96 1719 aa26.18■■□□□ 1.78
Chmp6-201ENSMUST00000026434 Abcc5Q9R1X5 1436 aa26.17■■□□□ 1.78
Chmp6-201ENSMUST00000026434 Mlh3A0A1Y7VMP7 1443 aa26.16■■□□□ 1.78
Chmp6-201ENSMUST00000026434 Dennd4bQ3U1Y4 1499 aa26.12■■□□□ 1.77
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms