RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Pcf11G3X9Z4 1553 aa31.06■■■□□ 2.56
Cdx1-201ENSMUST00000025521 Crocc2F6XLV1 1638 aa31.04■■■□□ 2.56
Cdx1-201ENSMUST00000025521 Kif21aQ9QXL2 1672 aa31.03■■■□□ 2.56
Cdx1-201ENSMUST00000025521 Polr1aO35134 1717 aaKnown RBP31.03■■■□□ 2.56
Cdx1-201ENSMUST00000025521 Cux1P53564 1515 aa31.01■■■□□ 2.55
Cdx1-201ENSMUST00000025521 Naip1Q9QWK5 1403 aa30.98■■■□□ 2.55
Cdx1-201ENSMUST00000025521 Peg3Q3URU2 1571 aa30.98■■■□□ 2.55
Cdx1-201ENSMUST00000025521 Urb2E9Q7L1 1524 aaKnown RBP30.96■■■□□ 2.55
Cdx1-201ENSMUST00000025521 Supt5hO55201 1082 aaKnown RBP30.92■■■□□ 2.54
Cdx1-201ENSMUST00000025521 TchhA0A0B4J1F9 1599 aa30.91■■■□□ 2.54
Cdx1-201ENSMUST00000025521 Slx4Q6P1D7 1565 aa30.91■■■□□ 2.54
Cdx1-201ENSMUST00000025521 Rpap1Q80TE0 1409 aa30.9■■■□□ 2.54
Cdx1-201ENSMUST00000025521 Fyco1Q8VDC1 1437 aa30.89■■■□□ 2.54
Cdx1-201ENSMUST00000025521 CntlnA2AM05 1397 aa30.87■■■□□ 2.53
Cdx1-201ENSMUST00000025521 Ap3b1Q9Z1T1 1105 aa30.82■■■□□ 2.52
Cdx1-201ENSMUST00000025521 Kdm5bQ80Y84 1544 aa30.8■■■□□ 2.52
Cdx1-201ENSMUST00000025521 Rad54l2Q99NG0 1466 aa30.78■■■□□ 2.52
Cdx1-201ENSMUST00000025521 BlmO88700 1416 aa30.76■■■□□ 2.51
Cdx1-201ENSMUST00000025521 Gpatch8A2A6A1 1505 aa30.74■■■□□ 2.51
Cdx1-201ENSMUST00000025521 Pla2r1Q62028 1487 aa30.73■■■□□ 2.51
Cdx1-201ENSMUST00000025521 Magi3Q9EQJ9 1476 aa30.7■■■□□ 2.51
Cdx1-201ENSMUST00000025521 EprsQ8CGC7 1512 aaKnown RBP30.68■■■□□ 2.5
Cdx1-201ENSMUST00000025521 Abca5Q8K448 1642 aa30.67■■■□□ 2.5
Cdx1-201ENSMUST00000025521 Las1lA2BE28 776 aaKnown RBP30.66■■■□□ 2.5
Cdx1-201ENSMUST00000025521 Pbrm1Q8BSQ9 1634 aaKnown RBP30.6■■■□□ 2.49
Cdx1-201ENSMUST00000025521 Dnajc5bQ9CQ94 199 aa30.6■■■□□ 2.49
Cdx1-201ENSMUST00000025521 Grin2aP35436 1464 aa30.6■■■□□ 2.49
Cdx1-201ENSMUST00000025521 Plb1Q3TTY0 1478 aa30.6■■■□□ 2.49
Cdx1-201ENSMUST00000025521 Setd1bQ8CFT2 1985 aa30.58■■■□□ 2.49
Cdx1-201ENSMUST00000025521 Adamts12Q811B3 1600 aa30.58■■■□□ 2.49
Cdx1-201ENSMUST00000025521 Gm1043A0A140LJC2 1431 aa30.57■■■□□ 2.48
Cdx1-201ENSMUST00000025521 Disp1Q3TDN0 1521 aa30.56■■■□□ 2.48
Cdx1-201ENSMUST00000025521 Aebp1Q640N1 1128 aa30.56■■■□□ 2.48
Cdx1-201ENSMUST00000025521 TonslQ6NZL6 1363 aa30.53■■■□□ 2.48
Cdx1-201ENSMUST00000025521 CadpsQ80TJ1 1355 aa30.51■■■□□ 2.47
Cdx1-201ENSMUST00000025521 Ift140E9PY46 1464 aa30.47■■■□□ 2.47
Cdx1-201ENSMUST00000025521 Gm7298A0A0N4SVU1 1476 aa30.47■■■□□ 2.47
Cdx1-201ENSMUST00000025521 WizO88286 1684 aaKnown RBP30.46■■■□□ 2.47
Cdx1-201ENSMUST00000025521 3425401B19RikD3Z1D3 1412 aa30.44■■■□□ 2.46
Cdx1-201ENSMUST00000025521 Sall2Q9QX96 1004 aa30.43■■■□□ 2.46
Cdx1-201ENSMUST00000025521 Nup160Q9Z0W3 1402 aaKnown RBP30.4■■■□□ 2.46
Cdx1-201ENSMUST00000025521 Soga1E1U8D0 1418 aa30.39■■■□□ 2.46
Cdx1-201ENSMUST00000025521 Lmtk2Q3TYD6 1471 aa30.38■■■□□ 2.45
Cdx1-201ENSMUST00000025521 Abca16E9PWJ7 1678 aa30.36■■■□□ 2.45
Cdx1-201ENSMUST00000025521 Fhad1A6PWD2 1420 aa30.35■■■□□ 2.45
Cdx1-201ENSMUST00000025521 Lmod2Q3UHZ5 550 aa30.33■■■□□ 2.45
Cdx1-201ENSMUST00000025521 Mia2Q91ZV0 1396 aa30.33■■■□□ 2.45
Cdx1-201ENSMUST00000025521 Lrriq1Q0P5X1 1673 aa30.32■■■□□ 2.44
Cdx1-201ENSMUST00000025521 Gcc2Q8CHG3 1679 aa30.32■■■□□ 2.44
Cdx1-201ENSMUST00000025521 Vps8Q0P5W1 1427 aa30.27■■■□□ 2.44
Cdx1-201ENSMUST00000025521 Aebp2Q9Z248 504 aaKnown RBP30.27■■■□□ 2.44
Cdx1-201ENSMUST00000025521 ClspnQ80YR7 1315 aa30.27■■■□□ 2.44
Cdx1-201ENSMUST00000025521 Kif27Q7M6Z4 1394 aa30.25■■■□□ 2.43
Cdx1-201ENSMUST00000025521 PxdnQ3UQ28 1475 aa30.24■■■□□ 2.43
Cdx1-201ENSMUST00000025521 Naip2Q9QUK4 1447 aa30.24■■■□□ 2.43
Cdx1-201ENSMUST00000025521 Cc2d2bA0A286YDU8 1405 aa30.19■■■□□ 2.42
Cdx1-201ENSMUST00000025521 Ccer2J3QPU5 274 aa30.18■■■□□ 2.42
Cdx1-201ENSMUST00000025521 Ankrd36D3Z4K0 1415 aa30.17■■■□□ 2.42
Cdx1-201ENSMUST00000025521 A2mQ6GQT1 1474 aa30.16■■■□□ 2.42
Cdx1-201ENSMUST00000025521 Wdr66E9Q743 1299 aa30.16■■■□□ 2.42
Cdx1-201ENSMUST00000025521 Ccnb3Q810T2 1396 aa30.15■■■□□ 2.42
Cdx1-201ENSMUST00000025521 BC005561E9Q5E2 1589 aa30.14■■■□□ 2.42
Cdx1-201ENSMUST00000025521 NexmifQ5DTT1 1515 aa30.14■■■□□ 2.41
Cdx1-201ENSMUST00000025521 Fam50aQ9WV03 339 aaKnown RBP30.13■■■□□ 2.41
Cdx1-201ENSMUST00000025521 Rapgef6Q5NCJ1 1609 aa30.1■■■□□ 2.41
Cdx1-201ENSMUST00000025521 Abcc2Q8VI47 1543 aa30.09■■■□□ 2.41
Cdx1-201ENSMUST00000025521 Fhod3Q76LL6 1578 aa30.06■■■□□ 2.4
Cdx1-201ENSMUST00000025521 WrnO09053 1401 aa30.03■■■□□ 2.4
Cdx1-201ENSMUST00000025521 UacaQ8CGB3 1411 aa30.03■■■□□ 2.4
Cdx1-201ENSMUST00000025521 Eid3Q3V124 375 aa30.03■■■□□ 2.4
Cdx1-201ENSMUST00000025521 Shroom2A2ALU4 1481 aa30.01■■■□□ 2.4
Cdx1-201ENSMUST00000025521 Rusc2Q80U22 1514 aa29.99■■■□□ 2.39
Cdx1-201ENSMUST00000025521 Cul7Q8VE73 1689 aa29.99■■■□□ 2.39
Cdx1-201ENSMUST00000025521 Mug1P28665 1476 aa29.98■■■□□ 2.39
Cdx1-201ENSMUST00000025521 Cdc42bpaQ3UU96 1719 aa29.97■■■□□ 2.39
Cdx1-201ENSMUST00000025521 Arhgef11Q68FM7 1552 aa29.96■■■□□ 2.39
Cdx1-201ENSMUST00000025521 Rfx7F8VPJ6 1459 aa29.95■■■□□ 2.39
Cdx1-201ENSMUST00000025521 Dennd4bQ3U1Y4 1499 aa29.95■■■□□ 2.38
Cdx1-201ENSMUST00000025521 Map3k4O08648 1597 aa29.92■■■□□ 2.38
Cdx1-201ENSMUST00000025521 Eif4g3Q80XI3 1579 aaKnown RBP29.91■■■□□ 2.38
Cdx1-201ENSMUST00000025521 Ncoa3O09000 1398 aa29.89■■■□□ 2.38
Cdx1-201ENSMUST00000025521 Kiaa1551Q5DTW7 1521 aa29.88■■■□□ 2.37
Cdx1-201ENSMUST00000025521 Arhgap27A2AB59 869 aa29.83■■■□□ 2.37
Cdx1-201ENSMUST00000025521 Ncoa2Q61026 1462 aa29.83■■■□□ 2.37
Cdx1-201ENSMUST00000025521 Dnmt1P13864 1620 aaKnown RBP29.83■■■□□ 2.37
Cdx1-201ENSMUST00000025521 Camsap2Q8C1B1 1461 aa29.8■■■□□ 2.36
Cdx1-201ENSMUST00000025521 Neurod1Q60867 357 aa29.78■■■□□ 2.36
Cdx1-201ENSMUST00000025521 Dhx57Q6P5D3 1388 aaKnown RBP29.77■■■□□ 2.36
Cdx1-201ENSMUST00000025521 Setbp1Q9Z180 1582 aa29.77■■■□□ 2.36
Cdx1-201ENSMUST00000025521 Zcchc11B2RX14 1644 aaKnown RBP29.77■■■□□ 2.36
Cdx1-201ENSMUST00000025521 Adcy10Q8C0T9 1614 aa29.76■■■□□ 2.36
Cdx1-201ENSMUST00000025521 Arhgap31A6X8Z5 1425 aa29.75■■■□□ 2.35
Cdx1-201ENSMUST00000025521 Plekhh2Q8C115 1491 aa29.75■■■□□ 2.35
Cdx1-201ENSMUST00000025521 Arhgef40Q3UPH7 1517 aa29.75■■■□□ 2.35
Cdx1-201ENSMUST00000025521 Abcc5Q9R1X5 1436 aa29.74■■■□□ 2.35
Cdx1-201ENSMUST00000025521 Ccdc141E9Q8Q6 1531 aa29.74■■■□□ 2.35
Cdx1-201ENSMUST00000025521 Mapkbp1Q6NS57 1503 aa29.73■■■□□ 2.35
Cdx1-201ENSMUST00000025521 Mroh2aD3Z750 1679 aa29.72■■■□□ 2.35
Cdx1-201ENSMUST00000025521 Rrbp1Q99PL5 1605 aaKnown RBP29.71■■■□□ 2.35
Cdx1-201ENSMUST00000025521 Magi1Q6RHR9 1471 aa29.7■■■□□ 2.35
Retrieved 100 of 22,080 RNA–protein pairs in 171.9 ms