RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 SLC25A20O43772 301 aa9.02□□□□□ -0.96
CPSF7-218ENST00000537641 ZNF22P17026 224 aaPredicted RBP9.02□□□□□ -0.96
CPSF7-218ENST00000537641 ZNF56Q15929 161 aa9.02□□□□□ -0.96
CPSF7-218ENST00000537641 DCANP1Q8TF63 244 aa9.02□□□□□ -0.96
CPSF7-218ENST00000537641 ZNF580Q9UK33 172 aa9.02□□□□□ -0.96
CPSF7-218ENST00000537641 ERG28Q9UKR5 140 aa9.02□□□□□ -0.96
CPSF7-218ENST00000537641 CSMD1Q96PZ7 3565 aa9.02□□□□□ -0.96
CPSF7-218ENST00000537641 TRAV12-3A0A0B4J271 114 aa9.02□□□□□ -0.97
CPSF7-218ENST00000537641 RHODO00212 210 aa9.02□□□□□ -0.97
CPSF7-218ENST00000537641 DSCR9P59020 149 aa9.02□□□□□ -0.97
CPSF7-218ENST00000537641 C20orf203Q8NBC4 194 aa9.02□□□□□ -0.97
CPSF7-218ENST00000537641 ZNF256Q9Y2P7 627 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-218ENST00000537641 B4DSR2 109 aa9.01□□□□□ -0.97
CPSF7-218ENST00000537641 M0R2P5 195 aa9.01□□□□□ -0.97
CPSF7-218ENST00000537641 CFHR3Q02985 330 aa9.01□□□□□ -0.97
CPSF7-218ENST00000537641 EDA2RQ9HAV5 297 aa9.01□□□□□ -0.97
CPSF7-218ENST00000537641 SPTAN1Q13813 2472 aaKnown RBP9.01□□□□□ -0.97
CPSF7-218ENST00000537641 H3BUX3 64 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 I3L3M4 83 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 GATA3P23771 443 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 LY6EQ16553 131 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 FAM74A4Q5TZK3 123 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 IGLV4-3A0A075B6K6 122 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 IGHV1OR15-1A0A075B7D0 117 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 TRAV26-1A0A087WT03 109 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 TRAV2A0A0B4J234 112 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 C9JAW5 83 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
CPSF7-218ENST00000537641 ATXN8Q156A1 80 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 MUSTN1Q8IVN3 82 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 RNF152Q8N8N0 203 aa9□□□□□ -0.97
CPSF7-218ENST00000537641 FLNCQ14315 2725 aa8.99□□□□□ -0.97
CPSF7-218ENST00000537641 SRD5A1P18405 259 aa8.99□□□□□ -0.97
CPSF7-218ENST00000537641 PYGO1Q9Y3Y4 419 aa8.99□□□□□ -0.97
CPSF7-218ENST00000537641 USP9XQ93008 2570 aaPredicted RBP8.98□□□□□ -0.97
CPSF7-218ENST00000537641 TRGV11A0A075B6L2 103 aa8.98□□□□□ -0.97
CPSF7-218ENST00000537641 TGFAP01135 160 aa8.98□□□□□ -0.97
CPSF7-218ENST00000537641 ZFAND6Q6FIF0 208 aa8.98□□□□□ -0.97
CPSF7-218ENST00000537641 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.97□□□□□ -0.976e-8■■■■□ 22.6
CPSF7-218ENST00000537641 A0A0J9YXY3 114 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 SNRPD3P62318 126 aaKnown RBP8.97□□□□□ -0.97
CPSF7-218ENST00000537641 LINC01620Q4KN68 170 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 Q8N1Y9 231 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 RAX2Q96IS3 184 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 CITED1Q99966 193 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 SVEP1Q4LDE5 3571 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 A0A0J9YXV3 536 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 TMEM89A2RUT3 159 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 K7EQG2 157 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 EDN2P20800 178 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 RPL13AP40429 203 aaKnown RBP8.97□□□□□ -0.97
CPSF7-218ENST00000537641 DEFB104AQ8WTQ1 72 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 CLUHP3Q96NS8 147 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 OPRPNQ99935 248 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-218ENST00000537641 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 SPANXCQ9NY87 97 aa8.97□□□□□ -0.97
CPSF7-218ENST00000537641 ACACBO00763 2458 aa8.96□□□□□ -0.97
CPSF7-218ENST00000537641 TRBV10-2A0A0K0K1G8 114 aa8.96□□□□□ -0.98
CPSF7-218ENST00000537641 BLCAPP62952 87 aa8.96□□□□□ -0.98
CPSF7-218ENST00000537641 Q1RN00 199 aa8.96□□□□□ -0.98
CPSF7-218ENST00000537641 TEX29Q8N6K0 151 aa8.96□□□□□ -0.98
CPSF7-218ENST00000537641 TIMM21Q9BVV7 248 aa8.96□□□□□ -0.98
CPSF7-218ENST00000537641 COL12A1Q99715 3063 aa8.96□□□□□ -0.98
CPSF7-218ENST00000537641 AVPP01185 164 aa8.95□□□□□ -0.98
CPSF7-218ENST00000537641 MRPS36P82909 103 aaKnown RBP8.95□□□□□ -0.98
CPSF7-218ENST00000537641 WFDC12Q8WWY7 111 aa8.95□□□□□ -0.98
CPSF7-218ENST00000537641 IGHV3-30-3P0DP02 117 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 CD28P10747 220 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 Q6Q795 121 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 LINC01356Q8N9X3 169 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 SPG11Q96JI7 2443 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 VPS13CQ709C8 3753 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 TRAV12-2A0A075B6T6 113 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 J3QLI3 93 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 PSMB8P28062 276 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 NTN5Q8WTR8 489 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-218ENST00000537641 NRGNQ92686 78 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 RNF183Q96D59 192 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 LITAFQ99732 161 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 ANAPC13Q9BS18 74 aa8.94□□□□□ -0.98
CPSF7-218ENST00000537641 MYO18BQ8IUG5 2567 aa8.93□□□□□ -0.98
CPSF7-218ENST00000537641 IGHV3-64A0A075B6Q5 118 aa8.93□□□□□ -0.98
CPSF7-218ENST00000537641 A0A096LNT2 108 aa8.93□□□□□ -0.98
CPSF7-218ENST00000537641 H7C2G1 150 aa8.93□□□□□ -0.98
CPSF7-218ENST00000537641 SPINK13Q1W4C9 94 aa8.93□□□□□ -0.98
CPSF7-218ENST00000537641 SVIPQ8NHG7 77 aa8.93□□□□□ -0.98
CPSF7-218ENST00000537641 H3BMM0 161 aa8.92□□□□□ -0.98
CPSF7-218ENST00000537641 H3BT86 120 aa8.92□□□□□ -0.98
CPSF7-218ENST00000537641 TRIAP1O43715 76 aa8.92□□□□□ -0.98
CPSF7-218ENST00000537641 SNCGO76070 127 aa8.92□□□□□ -0.98
CPSF7-218ENST00000537641 MIAQ16674 131 aa8.92□□□□□ -0.98
CPSF7-218ENST00000537641 UBE2WQ96B02 151 aa8.92□□□□□ -0.98
CPSF7-218ENST00000537641 YAE1D1Q9NRH1 226 aa8.92□□□□□ -0.98
CPSF7-218ENST00000537641 USP24Q9UPU5 2620 aa8.92□□□□□ -0.98
CPSF7-218ENST00000537641 TRAV8-4A0A0B4J246 113 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 TINCRA0A1B0GVN0 87 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 TIMM17BO60830 172 aa8.91□□□□□ -0.98
CPSF7-218ENST00000537641 IGKV3-20P01619 116 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms