RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W LAM4P38800 1345 aa5.69□□□□□ -1.5
VPS28YPL065W PHO5P00635 467 aa5.68□□□□□ -1.5
VPS28YPL065W PRE4P30657 266 aa5.68□□□□□ -1.5
VPS28YPL065W YIL092WP40497 633 aa5.68□□□□□ -1.5
VPS28YPL065W YIL077CP40508 320 aa5.68□□□□□ -1.5
VPS28YPL065W PMT6P42934 759 aa5.68□□□□□ -1.5
VPS28YPL065W RFX1P48743 811 aa5.68□□□□□ -1.5
VPS28YPL065W PIP2P52960 996 aa5.68□□□□□ -1.5
VPS28YPL065W NSE5Q03718 556 aa5.68□□□□□ -1.5
VPS28YPL065W PGK1P00560 416 aaKnown RBP5.67□□□□□ -1.5
VPS28YPL065W PRP22P24384 1145 aaKnown RBP5.67□□□□□ -1.5
VPS28YPL065W MIT1P40002 666 aa5.67□□□□□ -1.5
VPS28YPL065W BNA3P47039 444 aaKnown RBP5.67□□□□□ -1.5
VPS28YPL065W ENP2P48234 707 aaKnown RBP5.67□□□□□ -1.5
VPS28YPL065W MTD1Q02046 320 aaKnown RBP5.67□□□□□ -1.5
VPS28YPL065W NGL2Q03264 515 aaKnown RBP5.67□□□□□ -1.5
VPS28YPL065W RKI1Q12189 258 aa5.67□□□□□ -1.5
VPS28YPL065W MTC7P32633 139 aa5.66□□□□□ -1.5
VPS28YPL065W COS111P38308 924 aa5.66□□□□□ -1.5
VPS28YPL065W PRM2P40534 656 aa5.66□□□□□ -1.5
VPS28YPL065W ASN1P49089 572 aaKnown RBP5.66□□□□□ -1.5
VPS28YPL065W PPN1Q04119 674 aa5.66□□□□□ -1.5
VPS28YPL065W UFO1Q04511 668 aa5.66□□□□□ -1.5
VPS28YPL065W YFT2Q06676 274 aa5.66□□□□□ -1.5
VPS28YPL065W ULA1Q12059 462 aa5.66□□□□□ -1.5
VPS28YPL065W NUR1Q12066 484 aa5.66□□□□□ -1.5
VPS28YPL065W TPK2P06245 380 aa5.65□□□□□ -1.5
VPS28YPL065W PIF1P07271 859 aa5.65□□□□□ -1.5
VPS28YPL065W PTP2P29461 750 aa5.65□□□□□ -1.5
VPS28YPL065W YKL133CP36066 463 aa5.65□□□□□ -1.5
VPS28YPL065W CDS1P38221 457 aa5.65□□□□□ -1.5
VPS28YPL065W STL1P39932 569 aa5.65□□□□□ -1.5
VPS28YPL065W DIP5P53388 608 aa5.65□□□□□ -1.5
VPS28YPL065W SPO1P53541 631 aa5.65□□□□□ -1.5
VPS28YPL065W CNM67P53865 581 aaKnown RBP5.65□□□□□ -1.5
VPS28YPL065W CEG1Q01159 459 aaPredicted RBP5.65□□□□□ -1.5
VPS28YPL065W MLC2Q06580 163 aa5.65□□□□□ -1.5
VPS28YPL065W RTK1Q12100 620 aaPredicted RBP5.65□□□□□ -1.5
VPS28YPL065W PHO3P24031 467 aa5.64□□□□□ -1.51
VPS28YPL065W RMA1P36001 430 aaKnown RBP5.64□□□□□ -1.51
VPS28YPL065W CRG1P38892 291 aaRIP-Chip data5.64□□□□□ -1.51not detected
VPS28YPL065W NET1P47035 1189 aa5.64□□□□□ -1.51
VPS28YPL065W YDR179W-AQ03983 463 aa5.64□□□□□ -1.51
VPS28YPL065W TUP1P16649 713 aa5.63□□□□□ -1.51
VPS28YPL065W YMC1P32331 307 aa5.63□□□□□ -1.51
VPS28YPL065W RRP8P38961 392 aaKnown RBP5.63□□□□□ -1.51
VPS28YPL065W SCS2P40075 244 aaKnown RBP5.63□□□□□ -1.51
VPS28YPL065W FTR1P40088 404 aa5.63□□□□□ -1.51
VPS28YPL065W HIS6P40545 261 aa5.63□□□□□ -1.51
VPS28YPL065W ASK10P48361 1146 aa5.63□□□□□ -1.51
VPS28YPL065W DAK1P54838 584 aaKnown RBP5.63□□□□□ -1.51
VPS28YPL065W HMG2P12684 1045 aa5.62□□□□□ -1.51
VPS28YPL065W HOP1P20050 605 aa5.62□□□□□ -1.51
VPS28YPL065W NUP1P20676 1076 aa5.62□□□□□ -1.51
VPS28YPL065W MAD2P40958 196 aa5.62□□□□□ -1.51
VPS28YPL065W GAT1P43574 510 aa5.62□□□□□ -1.51
VPS28YPL065W MNT2P53059 558 aa5.62□□□□□ -1.51
VPS28YPL065W SQS1P53866 767 aaKnown RBP5.62□□□□□ -1.51
VPS28YPL065W TIM50Q02776 476 aa5.62□□□□□ -1.51
VPS28YPL065W YOL114CQ12322 202 aa5.62□□□□□ -1.51
VPS28YPL065W MSS1P32559 526 aaPredicted RBP5.61□□□□□ -1.51
VPS28YPL065W EHT1P38295 451 aa5.61□□□□□ -1.51
VPS28YPL065W SAW1P39735 261 aa5.61□□□□□ -1.51
VPS28YPL065W XBP1P40489 647 aa5.61□□□□□ -1.51
VPS28YPL065W THI6P41835 540 aa5.61□□□□□ -1.51
VPS28YPL065W YDL183CP48569 320 aa5.61□□□□□ -1.51
VPS28YPL065W PEF1P53238 335 aa5.61□□□□□ -1.51
VPS28YPL065W YCG1Q06680 1035 aa5.61□□□□□ -1.51
VPS28YPL065W PSF3Q12146 194 aa5.61□□□□□ -1.51
VPS28YPL065W RRP6Q12149 733 aaKnown RBP5.61□□□□□ -1.51
VPS28YPL065W VPS5Q92331 675 aa5.61□□□□□ -1.51
VPS28YPL065W ADH4P10127 382 aa5.6□□□□□ -1.51
VPS28YPL065W TGL1P34163 548 aa5.6□□□□□ -1.51
VPS28YPL065W RIM4P38741 713 aa5.6□□□□□ -1.51
VPS28YPL065W TMN3P40071 706 aa5.6□□□□□ -1.51
VPS28YPL065W QRI7P43122 407 aa5.6□□□□□ -1.51
VPS28YPL065W TAN1P53072 289 aaPredicted RBP5.6□□□□□ -1.51
VPS28YPL065W UBX4P54730 416 aa5.6□□□□□ -1.51
VPS28YPL065W IZH3Q07959 543 aa5.6□□□□□ -1.51
VPS28YPL065W DIN7Q12086 430 aa5.6□□□□□ -1.51
VPS28YPL065W MSS18P08593 268 aa5.59□□□□□ -1.51
VPS28YPL065W PGI1P12709 554 aaKnown RBP5.59□□□□□ -1.51
VPS28YPL065W APN1P22936 367 aa5.59□□□□□ -1.51
VPS28YPL065W ELF1P36053 145 aa5.59□□□□□ -1.51
VPS28YPL065W YHL041WP38730 149 aa5.59□□□□□ -1.51
VPS28YPL065W TAX4P47030 604 aa5.59□□□□□ -1.51
VPS28YPL065W SNF12P53628 566 aa5.59□□□□□ -1.51
VPS28YPL065W YNR071CP53757 342 aa5.59□□□□□ -1.51
VPS28YPL065W URA3P03962 267 aa5.58□□□□□ -1.52
VPS28YPL065W APA1P16550 321 aaKnown RBP5.58□□□□□ -1.52
VPS28YPL065W CBP3P21560 335 aa5.58□□□□□ -1.52
VPS28YPL065W ARG1P22768 420 aa5.58□□□□□ -1.52
VPS28YPL065W CWH43P25618 953 aa5.58□□□□□ -1.52
VPS28YPL065W SDS22P36047 338 aa5.58□□□□□ -1.52
VPS28YPL065W IMA5P40884 581 aa5.58□□□□□ -1.52
VPS28YPL065W PUS4P48567 403 aaKnown RBP5.58□□□□□ -1.52
VPS28YPL065W MOT3P54785 490 aaKnown RBP5.58□□□□□ -1.52
VPS28YPL065W FDC1Q03034 503 aa5.58□□□□□ -1.52
VPS28YPL065W HIM1Q06674 414 aa5.58□□□□□ -1.52
VPS28YPL065W AIM41Q12032 185 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 95.5 ms