RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	TAF5	P38129	798 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	PPE1	P38796	400 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
VAM10	YOR068C	RRP8	P38961	392 aa	Known RBP	3.75	□□□□□ -1.81
VAM10	YOR068C	DUN1	P39009	513 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	IES5	P40060	125 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	SAP185	P40856	1058 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	IML2	P47031	731 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	BIT61	P47041	543 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	ASK10	P48361	1146 aa		3.75	□□□□□ -1.81
VAM10	YOR068C	CDC31	P06704	161 aa	Known RBP	3.74	□□□□□ -1.81
VAM10	YOR068C	SUI2	P20459	304 aa	Known RBP	3.74	□□□□□ -1.81
VAM10	YOR068C	AAD3	P25612	363 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	MF(ALPHA)2	P32435	120 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	HIS7	P33734	552 aa	Known RBP	3.74	□□□□□ -1.81
VAM10	YOR068C	PXA2	P34230	853 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	RPC37	P36121	282 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	PPS1	P38148	807 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	SRP68	P38687	599 aa	Known RBP	3.74	□□□□□ -1.81
VAM10	YOR068C	CHS7	P38843	316 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	ACA1	P39970	489 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	FMP52	P40008	231 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	MSE1	P48525	536 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	PAN2	P53010	1115 aa	Predicted RBP	3.74	□□□□□ -1.81
VAM10	YOR068C	YGR016W	P53209	190 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	RSC1	P53236	928 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	CWC21	Q03375	135 aa	Known RBP	3.74	□□□□□ -1.81
VAM10	YOR068C	VBA4	Q04602	768 aa	Known RBP	3.74	□□□□□ -1.81
VAM10	YOR068C	PCL8	Q08966	492 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	POM34	Q12445	299 aa		3.74	□□□□□ -1.81
VAM10	YOR068C	TUB2	P02557	457 aa	Known RBP	3.73	□□□□□ -1.81
VAM10	YOR068C	SIR3	P06701	978 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
VAM10	YOR068C	DBF20	P32328	564 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	BCS1	P32839	456 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	NIP100	P33420	868 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	TIF5	P38431	405 aa	Known RBP	3.73	□□□□□ -1.81
VAM10	YOR068C	SFB3	P38810	929 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	STL1	P39932	569 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	EAF5	P39995	279 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	AIM20	P40451	204 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	PXA1	P41909	870 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	QRI7	P43122	407 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	VTC2	P43585	828 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	YNL247W	P53852	767 aa	Known RBP	3.73	□□□□□ -1.81
VAM10	YOR068C	TEP1	P53916	434 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	TIM11	P81449	96 aa	Predicted RBP	3.73	□□□□□ -1.81
VAM10	YOR068C	TAP42	Q04372	366 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	NGL1	Q08213	363 aa	Known RBP	3.73	□□□□□ -1.81
VAM10	YOR068C	CWC2	Q12046	339 aa	Predicted RBP	3.73	□□□□□ -1.81
VAM10	YOR068C	NUR1	Q12066	484 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	PUS9	Q12069	462 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	PSF3	Q12146	194 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	YOL114C	Q12322	202 aa		3.73	□□□□□ -1.81
VAM10	YOR068C	RPS9B	P05755	195 aa	Known RBP	3.72	□□□□□ -1.81
VAM10	YOR068C	HOP1	P20050	605 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	APN1	P22936	367 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	PHO3	P24031	467 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	KIN82	P25341	720 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	FEN2	P25621	512 aa	Known RBP	3.72	□□□□□ -1.81
VAM10	YOR068C	SPC110	P32380	944 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	PET309	P32522	965 aa	Predicted RBP	3.72	□□□□□ -1.81
VAM10	YOR068C	IME2	P32581	645 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
VAM10	YOR068C	POP2	P39008	433 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	NDE1	P40215	560 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	YIL092W	P40497	633 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	YIL077C	P40508	320 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	TAF4	P50105	388 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	TEL2	P53038	688 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	VID30	P53076	958 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	NNF2	P53253	936 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	PPN1	Q04119	674 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	YMR018W	Q04364	514 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	BLS1	Q06071	122 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	OMS1	Q06668	471 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	HIM1	Q06674	414 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	CDC45	Q08032	650 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	DIA2	Q08496	732 aa	Predicted RBP	3.72	□□□□□ -1.81
VAM10	YOR068C	CLP1	Q08685	445 aa	Predicted RBP	3.72	□□□□□ -1.81
VAM10	YOR068C	RUD3	Q12234	484 aa	Known RBP	3.72	□□□□□ -1.81
VAM10	YOR068C	DBP10	Q12389	995 aa	Known RBP	3.72	□□□□□ -1.81
VAM10	YOR068C	YKL033W-A	Q86ZR7	236 aa		3.72	□□□□□ -1.81
VAM10	YOR068C	SSM4	P40318	1319 aa		3.71	□□□□□ -1.81
VAM10	YOR068C	MER1	P16523	270 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	RPB4	P20433	221 aa	Predicted RBP	3.71	□□□□□ -1.82
VAM10	YOR068C	SEC15	P22224	910 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	PRP22	P24384	1145 aa	Known RBP	3.71	□□□□□ -1.82
VAM10	YOR068C	PRE4	P30657	266 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	MTC7	P32633	139 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	ARC19	P33204	171 aa	Known RBP	3.71	□□□□□ -1.82
VAM10	YOR068C	PHO11	P35842	467 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	PHO12	P38693	467 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	REV7	P38927	245 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	YMR124W	P39523	943 aa	Known RBP	3.71	□□□□□ -1.82
VAM10	YOR068C	SSP120	P39931	234 aa	Known RBP	3.71	□□□□□ -1.82
VAM10	YOR068C	PRM2	P40534	656 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	IRC5	P43610	853 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	RFX1	P48743	811 aa		3.71	□□□□□ -1.82
VAM10	YOR068C	FHN1	P53279	174 aa		3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms