RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	ECM29	P38737	1868 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	LEU1	P07264	779 aa	Known RBP	4.82	□□□□□ -1.64
SSB2	YNL209W	CHS1	P08004	1131 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	EST1	P17214	699 aa	Predicted RBP	4.82	□□□□□ -1.64
SSB2	YNL209W	ARG1	P22768	420 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	VBA3	P25594	458 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	SEC1	P30619	724 aa	Known RBP	4.82	□□□□□ -1.64
SSB2	YNL209W	HXT3	P32466	567 aa	Known RBP	4.82	□□□□□ -1.64
SSB2	YNL209W	MRP4	P32902	394 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	VBA5	P36172	582 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	YBL036C	P38197	257 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	PET100	P38958	111 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	AVT2	P39981	480 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	INP51	P40559	946 aa	Known RBP	4.82	□□□□□ -1.64
SSB2	YNL209W	PXA1	P41909	870 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	SKP2	P42843	763 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	SNZ3	P43545	298 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	YJL045W	P47052	634 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	JJJ3	P47138	172 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	HOP2	P53187	214 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	SNZ2	P53824	298 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	COG6	P53959	839 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	YNL040W	P53960	456 aa	Predicted RBP	4.82	□□□□□ -1.64
SSB2	YNL209W	BET4	Q00618	327 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	ADA2	Q02336	434 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	SHR3	Q02774	210 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	HOT1	Q03213	719 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	YMR027W	Q04371	470 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	CST9	Q06032	482 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	DNL4	Q08387	944 aa	Predicted RBP	4.82	□□□□□ -1.64
SSB2	YNL209W	MET7	Q08645	548 aa		4.82	□□□□□ -1.64
SSB2	YNL209W	RIB2	Q12362	591 aa	Known RBP	4.82	□□□□□ -1.64
SSB2	YNL209W	ILV2	P07342	687 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	YMR085W	P0CF18	432 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	GLN3	P18494	730 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	SLY1	P22213	666 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	APN1	P22936	367 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	SAT4	P25333	603 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	MEI4	P29467	408 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	MSS51	P32335	436 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	LOS1	P33418	1100 aa	Predicted RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	APN2	P38207	520 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	YSW1	P38280	609 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	PCM1	P38628	557 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	UTP18	P40362	594 aa	Predicted RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	RIC1	P40395	1056 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	YIL054W	P40524	105 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	LAM5	P43560	674 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	MND1	P53102	219 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	NMA111	P53920	997 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	ALG11	P53954	548 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	INA17	Q02888	182 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	PRM6	Q04705	352 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	FAP7	Q12055	197 aa	Predicted RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	VPS54	Q12071	889 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	GNT1	Q12096	491 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	MER1	P16523	270 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	BAS1	P22035	811 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	YCR015C	P25616	317 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	SRB2	P34162	210 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	SWC5	P38326	303 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	RTT105	P40063	208 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	RIO2	P40160	425 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	RIM21	P48565	533 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	NCS6	P53088	359 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	DAK1	P54838	584 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	RPL22B	P56628	122 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	MUK1	Q02866	612 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	DOT1	Q04089	582 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	YLR225C	Q05948	407 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	THI7	Q05998	598 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	KAP95	Q06142	861 aa	Known RBP	4.81	□□□□□ -1.64
SSB2	YNL209W	CDC73	Q06697	393 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	AIM39	Q08223	395 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	CTF3	Q12748	733 aa		4.81	□□□□□ -1.64
SSB2	YNL209W	TEF1	P02994	458 aa	Known RBP	4.8	□□□□□ -1.64
SSB2	YNL209W	PRP4	P20053	465 aa	Known RBP	4.8	□□□□□ -1.64
SSB2	YNL209W	YME2	P32843	850 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	BUD2	P33314	1104 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	PET112	P33893	541 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	MOT2	P34909	587 aa	Known RBP	4.8	□□□□□ -1.64
SSB2	YNL209W	GPT2	P36148	743 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	ABZ1	P37254	787 aa	Predicted RBP	4.8	□□□□□ -1.64
SSB2	YNL209W	SMF2	P38778	549 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	YHR054C	P38780	354 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	RSC30	P38781	883 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	OAF1	P39720	1047 aa	Predicted RBP	4.8	□□□□□ -1.64
SSB2	YNL209W	MXR1	P40029	184 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	YER186C	P40101	306 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	ARG2	P40360	574 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	TMA108	P40462	946 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	TDA10	P42938	290 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	SET2	P46995	733 aa	Known RBP	4.8	□□□□□ -1.64
SSB2	YNL209W	YJR054W	P47114	497 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	SRB7	P47822	140 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	CDC55	Q00362	526 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	FMP30	Q02883	468 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	MUB1	Q03162	620 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	MZM1	Q03429	123 aa	Predicted RBP	4.8	□□□□□ -1.64
SSB2	YNL209W	DIS3	Q08162	1001 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms