RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE2	YKL130C	SST2	P11972	698 aa	Known RBP	2.75	□□□□□ -1.97
SHE2	YKL130C	PMA2	P19657	947 aa		2.75	□□□□□ -1.97
SHE2	YKL130C	PRP22	P24384	1145 aa	Known RBP	2.75	□□□□□ -1.97
SHE2	YKL130C	IMG2	P25642	146 aa	Predicted RBP	2.75	□□□□□ -1.97
SHE2	YKL130C	YPT7	P32939	208 aa		2.75	□□□□□ -1.97
SHE2	YKL130C	TDA3	P38758	523 aa		2.75	□□□□□ -1.97
SHE2	YKL130C	EMP65	P40085	556 aa		2.75	□□□□□ -1.97
SHE2	YKL130C	RET2	P43621	546 aa		2.75	□□□□□ -1.97
SHE2	YKL130C	NIT2	P47016	307 aa		2.75	□□□□□ -1.97
SHE2	YKL130C	YGR153W	P48238	217 aa		2.75	□□□□□ -1.97
SHE2	YKL130C	BUD21	Q08492	214 aa	Predicted RBP	2.75	□□□□□ -1.97
SHE2	YKL130C	RMP1	Q12530	201 aa		2.75	□□□□□ -1.97
SHE2	YKL130C	LEU2	P04173	364 aa	Predicted RBP	2.74	□□□□□ -1.97
SHE2	YKL130C	RPL7A	P05737	244 aa	Known RBP	2.74	□□□□□ -1.97
SHE2	YKL130C	YEF3	P16521	1044 aa	Known RBP	2.74	□□□□□ -1.97
SHE2	YKL130C	TFC4	P33339	1025 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	PPE1	P38796	400 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	GPP2	P40106	250 aa	Known RBP	2.74	□□□□□ -1.97
SHE2	YKL130C	SNO3	P43544	222 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	NMD5	P46970	1048 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	YJL043W	P47053	257 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	YIP4	P53093	235 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	SCW4	P53334	386 aa	Known RBP	2.74	□□□□□ -1.97
SHE2	YKL130C	TGL2	P54857	326 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	MFM1	Q02783	413 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	YMR210W	Q03649	449 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	ATG16	Q03818	150 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	RPL7B	Q12213	244 aa	Known RBP	2.74	□□□□□ -1.97
SHE2	YKL130C	MPD2	Q99316	277 aa		2.74	□□□□□ -1.97
SHE2	YKL130C	AQY1	P0CD91	305 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	TRX2	P22803	104 aa	Known RBP	2.73	□□□□□ -1.97
SHE2	YKL130C	RPC34	P32910	317 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	NIC96	P34077	839 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	YKL133C	P36066	463 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	MAL31	P38156	614 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	FUI1	P38196	639 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	APD1	P38281	316 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	JHD1	P40034	492 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	TMN3	P40071	706 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	MNT3	P40549	630 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	BFA1	P47113	574 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	SLD3	P53135	668 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	YGR021W	P53212	290 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	PAP2	P53632	584 aa	Known RBP	2.73	□□□□□ -1.97
SHE2	YKL130C	YNL034W	P53963	612 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	YNL018C	P53976	612 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	UBX4	P54730	416 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	PTA1	Q01329	785 aa	Predicted RBP	2.73	□□□□□ -1.97
SHE2	YKL130C	MET14	Q02196	202 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	ECM9	Q02202	377 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	RCR2	Q03446	210 aa	Known RBP	2.73	□□□□□ -1.97
SHE2	YKL130C	SKY1	Q03656	742 aa		2.73	□□□□□ -1.97
SHE2	YKL130C	ECM16	Q04217	1267 aa	Known RBP	2.73	□□□□□ -1.97
SHE2	YKL130C	RRP6	Q12149	733 aa	Known RBP	2.73	□□□□□ -1.97
SHE2	YKL130C	CPA2	P03965	1118 aa	Known RBP	2.72	□□□□□ -1.97
SHE2	YKL130C	GAL1	P04385	528 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	URE2	P23202	354 aa	Known RBP	2.72	□□□□□ -1.97
SHE2	YKL130C	PTP2	P29461	750 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	YKU70	P32807	602 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	PTH2	P34222	208 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	BEM4	P39011	633 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	PXA1	P41909	870 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	TAN1	P53072	289 aa	Predicted RBP	2.72	□□□□□ -1.97
SHE2	YKL130C	SPC105	P53148	917 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	COQ6	P53318	479 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	RSC9	Q03124	581 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	PHM6	Q05637	104 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	YDL073W	Q07454	984 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	YPL216W	Q08964	1102 aa		2.72	□□□□□ -1.97
SHE2	YKL130C	PGI1	P12709	554 aa	Known RBP	2.71	□□□□□ -1.98
SHE2	YKL130C	COX11	P19516	300 aa	Known RBP	2.71	□□□□□ -1.98
SHE2	YKL130C	HEM12	P32347	362 aa	Predicted RBP	2.71	□□□□□ -1.98
SHE2	YKL130C	SPC97	P38863	823 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	PCI8	P40512	444 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	YHM2	Q04013	314 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	YLR407W	Q06070	228 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	MLC2	Q06580	163 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	YDL121C	Q07541	149 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	PEX15	Q08215	383 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	NEW1	Q08972	1196 aa	Known RBP	2.71	□□□□□ -1.98
SHE2	YKL130C	HFI1	Q12060	488 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	YPR027C	Q12079	277 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	APM4	Q99186	491 aa		2.71	□□□□□ -1.98
SHE2	YKL130C	SEC3	P33332	1336 aa	Known RBP	2.7	□□□□□ -1.98
SHE2	YKL130C	YMR084W	A2P2R3	262 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	PIF1	P07271	859 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	DAL3	P32459	195 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	MRS6	P32864	603 aa	Known RBP	2.7	□□□□□ -1.98
SHE2	YKL130C	ASK1	P35734	292 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	OAF3	P36023	863 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	PXL1	P36166	706 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	HXT6	P39003	570 aa	Known RBP	2.7	□□□□□ -1.98
SHE2	YKL130C	HXT7	P39004	570 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	IES5	P40060	125 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	RNR4	P49723	345 aa	Known RBP	2.7	□□□□□ -1.98
SHE2	YKL130C	SPO1	P53541	631 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	EFR3	Q03653	782 aa	Known RBP	2.7	□□□□□ -1.98
SHE2	YKL130C	TMA64	Q04600	565 aa	Known RBP	2.7	□□□□□ -1.98
SHE2	YKL130C	PSR2	Q07949	397 aa		2.7	□□□□□ -1.98
SHE2	YKL130C	NKP1	Q12493	238 aa		2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms