RNA–Protein interactions for RNA: YJL192C

SOP4, Transcript of ER-membrane protein, yeast

Gene SOP4, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOP4	YJL192C	NGL3	Q03210	505 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	POB3	Q04636	552 aa	Known RBP	4.12	□□□□□ -1.75
SOP4	YJL192C	NDL1	Q06568	189 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	TMA16	Q08687	178 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	NEW1	Q08972	1196 aa	Known RBP	4.12	□□□□□ -1.75
SOP4	YJL192C	DCS2	Q12123	353 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	NCB2	Q92317	146 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	RPB2	P08518	1224 aa	Known RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	TAL1	P15019	335 aa	Known RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	CKI1	P20485	582 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	OPI1	P21957	404 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	MCM3	P24279	971 aa	Known RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	MCM4	P30665	933 aa	Known RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	PUP2	P32379	260 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	HXT1	P32465	570 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	TFC3	P34111	1160 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	YKR018C	P36114	725 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	ADE17	P38009	592 aa	Known RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	KTR3	P38130	404 aa	Predicted RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	GPD2	P41911	440 aa	Known RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	SSY5	P47002	699 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	YGR283C	P53336	341 aa	Predicted RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	SPO19	Q03029	223 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	PKH1	Q03407	766 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	MUS81	Q04149	632 aa	Predicted RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	DLT1	Q04216	342 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	ASM4	Q05166	528 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	YSH1	Q06224	779 aa	Predicted RBP	4.11	□□□□□ -1.75
SOP4	YJL192C	YLR177W	Q06251	628 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	YOR131C	Q12486	218 aa		4.11	□□□□□ -1.75
SOP4	YJL192C	CDC8	P00572	216 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	CAN1	P04817	590 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	PIF1	P07271	859 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	YMR085W	P0CF18	432 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	SPO11	P23179	398 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	KCC4	P25389	1037 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	CDC60	P26637	1090 aa	Known RBP	4.1	□□□□□ -1.75
SOP4	YJL192C	TOA1	P32773	286 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	LOS1	P33418	1100 aa	Predicted RBP	4.1	□□□□□ -1.75
SOP4	YJL192C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
SOP4	YJL192C	GGA2	P38817	585 aa	Known RBP	4.1	□□□□□ -1.75
SOP4	YJL192C	BEM4	P39011	633 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	RSP5	P39940	809 aa	Known RBP	4.1	□□□□□ -1.75
SOP4	YJL192C	PFA3	P42836	336 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	OSW7	P43611	510 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	ALG2	P43636	503 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	YJR142W	P47173	342 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	GFD1	Q04839	188 aa	Known RBP	4.1	□□□□□ -1.75
SOP4	YJL192C	MRD1	Q06106	887 aa	Known RBP	4.1	□□□□□ -1.75
SOP4	YJL192C	ACF2	Q12168	779 aa		4.1	□□□□□ -1.75
SOP4	YJL192C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SOP4	YJL192C	RAD1	P06777	1100 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	CIT2	P08679	460 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	RPS24A	P0CX31	135 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	RPS24B	P0CX32	135 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	NAT1	P12945	854 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	CAF20	P12962	161 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	IME1	P21190	360 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	ARG1	P22768	420 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	CLB4	P24871	460 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	PER1	P25625	357 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	BUD14	P27637	709 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	PEP3	P27801	918 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	GCG1	P32656	232 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	SRL3	P36167	246 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	YBR053C	P38235	358 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	BCD1	P38772	366 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	SMF1	P38925	575 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	UBP12	P39538	1254 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	NOC2	P39744	710 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	PZF1	P39933	429 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	VID28	P40547	921 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	YIL001W	P40560	513 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	BUD6	P41697	788 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	RSC8	P43609	557 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	YJR039W	P47107	1121 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	GND2	P53319	492 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	SUB1	P54000	292 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	HOT1	Q03213	719 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	RPN4	Q03465	531 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	SPC24	Q04477	213 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	FAR8	Q05040	523 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	HCR1	Q05775	265 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	MET7	Q08645	548 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	APL5	Q08951	932 aa	Known RBP	4.09	□□□□□ -1.75
SOP4	YJL192C	TAF10	Q12030	206 aa		4.09	□□□□□ -1.75
SOP4	YJL192C	TUP1	P16649	713 aa		4.08	□□□□□ -1.76
SOP4	YJL192C	ADE2	P21264	571 aa	Known RBP	4.08	□□□□□ -1.76
SOP4	YJL192C	RAD57	P25301	460 aa		4.08	□□□□□ -1.76
SOP4	YJL192C	YCR051W	P25631	222 aa		4.08	□□□□□ -1.76
SOP4	YJL192C	BMH1	P29311	267 aa	Known RBP	4.08	□□□□□ -1.76
SOP4	YJL192C	SWC3	P31376	625 aa		4.08	□□□□□ -1.76
SOP4	YJL192C	MTH1	P35198	433 aa		4.08	□□□□□ -1.76
SOP4	YJL192C	PIH1	P38768	344 aa		4.08	□□□□□ -1.76
SOP4	YJL192C	YMR124W	P39523	943 aa	Known RBP	4.08	□□□□□ -1.76
SOP4	YJL192C	SHQ1	P40486	507 aa	Predicted RBP	4.08	□□□□□ -1.76
SOP4	YJL192C	AXL1	P40851	1208 aa		4.08	□□□□□ -1.76
SOP4	YJL192C	ASI1	P54074	624 aa		4.08	□□□□□ -1.76
SOP4	YJL192C	ADA2	Q02336	434 aa		4.08	□□□□□ -1.76
SOP4	YJL192C	TFB2	Q02939	513 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms