RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C PPE1P38796 400 aa3.11□□□□□ -1.91
NMD2YHR077C AIM18P38884 321 aa3.11□□□□□ -1.91
NMD2YHR077C MXR1P40029 184 aa3.11□□□□□ -1.91
NMD2YHR077C RPT2P40327 437 aaKnown RBP3.11□□□□□ -1.91
NMD2YHR077C MDJ2P42834 146 aa3.11□□□□□ -1.91
NMD2YHR077C COG6P53959 839 aa3.11□□□□□ -1.91
NMD2YHR077C DAK1P54838 584 aaKnown RBP3.11□□□□□ -1.91
NMD2YHR077C TMA46Q12000 345 aaKnown RBP3.11□□□□□ -1.91
NMD2YHR077C HFI1Q12060 488 aa3.11□□□□□ -1.91
NMD2YHR077C GNT1Q12096 491 aa3.11□□□□□ -1.91
NMD2YHR077C YRR1Q12172 810 aa3.11□□□□□ -1.91
NMD2YHR077C SLY1P22213 666 aa3.11□□□□□ -1.91
NMD2YHR077C GID7P25569 745 aa3.11□□□□□ -1.91
NMD2YHR077C MSS51P32335 436 aa3.11□□□□□ -1.91
NMD2YHR077C MAP2P38174 421 aaKnown RBP3.11□□□□□ -1.91
NMD2YHR077C STS1P38637 319 aa3.11□□□□□ -1.91
NMD2YHR077C GGA2P38817 585 aaKnown RBP3.11□□□□□ -1.91
NMD2YHR077C ERP5P38819 212 aa3.11□□□□□ -1.91
NMD2YHR077C MND2P40577 368 aa3.11□□□□□ -1.91
NMD2YHR077C SKP2P42843 763 aa3.11□□□□□ -1.91
NMD2YHR077C SNG1P46950 547 aa3.11□□□□□ -1.91
NMD2YHR077C POL31P46957 487 aa3.11□□□□□ -1.91
NMD2YHR077C MAD3P47074 515 aa3.11□□□□□ -1.91
NMD2YHR077C LIA1P47120 325 aaKnown RBP3.11□□□□□ -1.91
NMD2YHR077C HLJ1P48353 224 aa3.11□□□□□ -1.91
NMD2YHR077C NUP42P49686 430 aaKnown RBP3.11□□□□□ -1.91
NMD2YHR077C STB4P50104 949 aa3.11□□□□□ -1.91
NMD2YHR077C YGR283CP53336 341 aaPredicted RBP3.11□□□□□ -1.91
NMD2YHR077C UBX4P54730 416 aa3.11□□□□□ -1.91
NMD2YHR077C MSC2Q03455 724 aa3.11□□□□□ -1.91
NMD2YHR077C SPC24Q04477 213 aa3.11□□□□□ -1.91
NMD2YHR077C MDM38Q08179 573 aa3.11□□□□□ -1.91
NMD2YHR077C CIR2Q08822 631 aa3.11□□□□□ -1.91
NMD2YHR077C YOR022CQ12204 715 aa3.11□□□□□ -1.91
NMD2YHR077C YMR030W-AQ3E760 96 aa3.11□□□□□ -1.91
NMD2YHR077C BIO2P32451 375 aa3.1□□□□□ -1.91
NMD2YHR077C EFB1P32471 206 aaKnown RBP3.1□□□□□ -1.91
NMD2YHR077C GDA1P32621 518 aa3.1□□□□□ -1.91
NMD2YHR077C YBR284WP38150 797 aa3.1□□□□□ -1.91
NMD2YHR077C CTP1P38152 299 aa3.1□□□□□ -1.91
NMD2YHR077C MEF2P39677 819 aa3.1□□□□□ -1.91
NMD2YHR077C DSN1P40568 576 aa3.1□□□□□ -1.91
NMD2YHR077C SPR3P41901 512 aa3.1□□□□□ -1.91
NMD2YHR077C REF2P42073 533 aaPredicted RBP3.1□□□□□ -1.91
NMD2YHR077C TAF6P53040 516 aa3.1□□□□□ -1.91
NMD2YHR077C YLR455WQ06188 304 aa3.1□□□□□ -1.91
NMD2YHR077C YLR053CQ12026 108 aa3.1□□□□□ -1.91
NMD2YHR077C LDB19Q12502 818 aa3.1□□□□□ -1.91
NMD2YHR077C VPS5Q92331 675 aa3.1□□□□□ -1.91
NMD2YHR077C EXO70P19658 623 aa3.1□□□□□ -1.91
NMD2YHR077C AMS1P22855 1083 aa3.1□□□□□ -1.91
NMD2YHR077C MRPL7P36519 292 aa3.1□□□□□ -1.91
NMD2YHR077C LYS9P38999 446 aa3.1□□□□□ -1.91
NMD2YHR077C SCC4P40090 624 aa3.1□□□□□ -1.91
NMD2YHR077C ISM1P48526 1002 aa3.1□□□□□ -1.91
NMD2YHR077C USE1P53146 245 aa3.1□□□□□ -1.91
NMD2YHR077C BRE5P53741 515 aaKnown RBP3.1□□□□□ -1.91
NMD2YHR077C YAF9P53930 226 aa3.1□□□□□ -1.91
NMD2YHR077C BET4Q00618 327 aa3.1□□□□□ -1.91
NMD2YHR077C ARP9Q05123 467 aa3.1□□□□□ -1.91
NMD2YHR077C GLO2Q05584 274 aa3.1□□□□□ -1.91
NMD2YHR077C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
NMD2YHR077C RCL1Q08096 367 aaPredicted RBP3.1□□□□□ -1.91
NMD2YHR077C SNX3Q08826 162 aaKnown RBP3.1□□□□□ -1.91
NMD2YHR077C TY3A-GQ12173 290 aa3.1□□□□□ -1.91
NMD2YHR077C PUS1Q12211 544 aaKnown RBP3.1□□□□□ -1.91
NMD2YHR077C STB3Q12427 513 aa3.1□□□□□ -1.91
NMD2YHR077C TY3A-IQ99219 290 aa3.1□□□□□ -1.91
NMD2YHR077C ERR1P0CX10 437 aa3.1□□□□□ -1.91
NMD2YHR077C ERR2P0CX11 437 aa3.1□□□□□ -1.91
NMD2YHR077C HSP26P15992 214 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
NMD2YHR077C YBR053CP38235 358 aa3.1□□□□□ -1.91
NMD2YHR077C HSL7P38274 827 aa3.1□□□□□ -1.91
NMD2YHR077C TSC10P38342 320 aa3.1□□□□□ -1.91
NMD2YHR077C SIC1P38634 284 aa3.1□□□□□ -1.91
NMD2YHR077C YHL026CP38740 315 aa3.1□□□□□ -1.91
NMD2YHR077C FHL1P39521 936 aa3.1□□□□□ -1.91
NMD2YHR077C YAT2P40017 923 aa3.1□□□□□ -1.91
NMD2YHR077C ERR3P42222 437 aa3.1□□□□□ -1.91
NMD2YHR077C HOP2P53187 214 aa3.1□□□□□ -1.91
NMD2YHR077C ATF2P53296 535 aa3.1□□□□□ -1.91
NMD2YHR077C ALG11P53954 548 aaKnown RBP3.1□□□□□ -1.91
NMD2YHR077C AIM32Q04689 311 aa3.1□□□□□ -1.91
NMD2YHR077C SUT2Q12286 268 aa3.1□□□□□ -1.91
NMD2YHR077C ATP2P00830 511 aaKnown RBP3.09□□□□□ -1.91
NMD2YHR077C SPS22P25380 463 aa3.09□□□□□ -1.91
NMD2YHR077C SLA2P33338 968 aa3.09□□□□□ -1.91
NMD2YHR077C COY1P34237 679 aa3.09□□□□□ -1.91
NMD2YHR077C NOP4P37838 685 aaKnown RBP3.09□□□□□ -1.91
NMD2YHR077C SIP5P40210 489 aaKnown RBP3.09□□□□□ -1.91
NMD2YHR077C PEP8P40335 379 aa3.09□□□□□ -1.91
NMD2YHR077C ATM1P40416 690 aa3.09□□□□□ -1.91
NMD2YHR077C RFX1P48743 811 aa3.09□□□□□ -1.91
NMD2YHR077C ASN2P49090 572 aaKnown RBP3.09□□□□□ -1.91
NMD2YHR077C UTP8P53276 713 aaKnown RBP3.09□□□□□ -1.91
NMD2YHR077C UBP2Q01476 1272 aa3.09□□□□□ -1.91
NMD2YHR077C SPP1Q03012 353 aa3.09□□□□□ -1.91
NMD2YHR077C JIP4Q03361 876 aa3.09□□□□□ -1.91
NMD2YHR077C ARA2Q04212 335 aa3.09□□□□□ -1.91
NMD2YHR077C YLR225CQ05948 407 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 71.9 ms