RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W RET3P53600 189 aa1.91□□□□□ -2.1
TRM3YDL112W VPS72Q03388 795 aa1.91□□□□□ -2.1
TRM3YDL112W RPN4Q03465 531 aa1.91□□□□□ -2.1
TRM3YDL112W ASM4Q05166 528 aa1.91□□□□□ -2.1
TRM3YDL112W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
TRM3YDL112W PWP2P25635 923 aaKnown RBP1.91□□□□□ -2.1
TRM3YDL112W PEP3P27801 918 aa1.91□□□□□ -2.1
TRM3YDL112W VPH1P32563 840 aaKnown RBP1.91□□□□□ -2.1
TRM3YDL112W TYE7P33122 291 aaPredicted RBP1.91□□□□□ -2.1
TRM3YDL112W BMH2P34730 273 aaKnown RBP1.91□□□□□ -2.1
TRM3YDL112W TSL1P38427 1098 aaKnown RBP1.91□□□□□ -2.1
TRM3YDL112W SKN7P38889 622 aa1.91□□□□□ -2.1
TRM3YDL112W YGL138CP53122 345 aa1.91□□□□□ -2.1
TRM3YDL112W MRPL22P53881 309 aa1.91□□□□□ -2.1
TRM3YDL112W MFM1Q02783 413 aa1.91□□□□□ -2.1
TRM3YDL112W ECM7Q06200 448 aa1.91□□□□□ -2.1
TRM3YDL112W TPO1Q07824 586 aa1.91□□□□□ -2.1
TRM3YDL112W SWM1Q12379 170 aa1.91□□□□□ -2.1
TRM3YDL112W CEX1Q12453 761 aa1.91□□□□□ -2.1
TRM3YDL112W PCD1Q12524 340 aa1.91□□□□□ -2.1
TRM3YDL112W TCP1P12612 559 aaKnown RBP1.91□□□□□ -2.1
TRM3YDL112W CBP3P21560 335 aa1.91□□□□□ -2.1
TRM3YDL112W PRP22P24384 1145 aaKnown RBP1.91□□□□□ -2.1
TRM3YDL112W PGM1P33401 570 aaKnown RBP1.91□□□□□ -2.1
TRM3YDL112W UBP11P36026 717 aa1.91□□□□□ -2.1
TRM3YDL112W HMT1P38074 348 aa1.91□□□□□ -2.1
TRM3YDL112W YJR120WP47157 116 aa1.91□□□□□ -2.1
TRM3YDL112W ORC4P54791 529 aa1.91□□□□□ -2.1
TRM3YDL112W ATP1P07251 545 aaKnown RBP1.9□□□□□ -2.1
TRM3YDL112W ACE2P21192 770 aa1.9□□□□□ -2.1
TRM3YDL112W DAL3P32459 195 aa1.9□□□□□ -2.1
TRM3YDL112W ARP1P38696 384 aa1.9□□□□□ -2.1
TRM3YDL112W ESL1P40456 1118 aa1.9□□□□□ -2.1
TRM3YDL112W FIS1P40515 155 aa1.9□□□□□ -2.1
TRM3YDL112W RPS7BP48164 190 aaKnown RBP1.9□□□□□ -2.1
TRM3YDL112W EMI2Q04409 500 aaKnown RBP1.9□□□□□ -2.1
TRM3YDL112W IRC10Q08118 586 aa1.9□□□□□ -2.1
TRM3YDL112W SDH5Q08230 162 aa1.9□□□□□ -2.1
TRM3YDL112W HAL9Q12180 1030 aa1.9□□□□□ -2.1
TRM3YDL112W SES1P07284 462 aaKnown RBP1.9□□□□□ -2.11
TRM3YDL112W HSF1P10961 833 aa1.9□□□□□ -2.11
TRM3YDL112W IMG2P25642 146 aaPredicted RBP1.9□□□□□ -2.11
TRM3YDL112W YHL026CP38740 315 aa1.9□□□□□ -2.11
TRM3YDL112W YNL195CP40168 261 aa1.9□□□□□ -2.11
TRM3YDL112W CSM2P40465 213 aa1.9□□□□□ -2.11
TRM3YDL112W YGR153WP48238 217 aa1.9□□□□□ -2.11
TRM3YDL112W YDR341CQ05506 607 aaKnown RBP1.9□□□□□ -2.11
TRM3YDL112W ARP6Q12509 438 aa1.9□□□□□ -2.11
TRM3YDL112W HMG1P12683 1054 aa1.9□□□□□ -2.11
TRM3YDL112W SFL1P20134 766 aa1.9□□□□□ -2.11
TRM3YDL112W RFS1P38234 210 aaKnown RBP1.9□□□□□ -2.11
TRM3YDL112W MSS4P38994 779 aa1.9□□□□□ -2.11
TRM3YDL112W MOB1P40484 314 aa1.9□□□□□ -2.11
TRM3YDL112W VID30P53076 958 aa1.9□□□□□ -2.11
TRM3YDL112W NRD1P53617 575 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
TRM3YDL112W PLB2Q03674 706 aa1.9□□□□□ -2.11
TRM3YDL112W COQ9Q05779 260 aa1.9□□□□□ -2.11
TRM3YDL112W NKP2Q06162 153 aa1.9□□□□□ -2.11
TRM3YDL112W YDL177CQ12257 170 aa1.9□□□□□ -2.11
TRM3YDL112W LPX1Q12405 387 aaKnown RBP1.9□□□□□ -2.11
TRM3YDL112W NOP14Q99207 810 aaKnown RBP1.9□□□□□ -2.11
TRM3YDL112W HMG2P12684 1045 aa1.9□□□□□ -2.11
TRM3YDL112W GLN3P18494 730 aa1.9□□□□□ -2.11
TRM3YDL112W MUK1Q02866 612 aa1.9□□□□□ -2.11
TRM3YDL112W HCR1Q05775 265 aaKnown RBP1.9□□□□□ -2.11
TRM3YDL112W SUE1Q06524 206 aa1.9□□□□□ -2.11
TRM3YDL112W GPB1Q08886 897 aa1.9□□□□□ -2.11
TRM3YDL112W MSH2P25847 964 aa1.89□□□□□ -2.11
TRM3YDL112W TMT1P32643 299 aa1.89□□□□□ -2.11
TRM3YDL112W MRX3P38172 270 aa1.89□□□□□ -2.11
TRM3YDL112W SUL1P38359 859 aa1.89□□□□□ -2.11
TRM3YDL112W ASE1P50275 885 aa1.89□□□□□ -2.11
TRM3YDL112W SHE10P53075 577 aa1.89□□□□□ -2.11
TRM3YDL112W CAF130P53280 1122 aaPredicted RBP1.89□□□□□ -2.11
TRM3YDL112W THI73Q07904 523 aa1.89□□□□□ -2.11
TRM3YDL112W ENV7Q12003 364 aa1.89□□□□□ -2.11
TRM3YDL112W RPS13P05756 151 aaKnown RBP1.89□□□□□ -2.11
TRM3YDL112W HAP2P06774 265 aa1.89□□□□□ -2.11
TRM3YDL112W MATALPHA2P0CY08 210 aa1.89□□□□□ -2.11
TRM3YDL112W HMLALPHA2P0CY09 210 aa1.89□□□□□ -2.11
TRM3YDL112W CKA2P19454 339 aa1.89□□□□□ -2.11
TRM3YDL112W SEC15P22224 910 aa1.89□□□□□ -2.11
TRM3YDL112W STO1P34160 861 aaKnown RBP1.89□□□□□ -2.11
TRM3YDL112W ABZ1P37254 787 aaPredicted RBP1.89□□□□□ -2.11
TRM3YDL112W RXT2P38255 430 aa1.89□□□□□ -2.11
TRM3YDL112W LAM1P38851 1228 aa1.89□□□□□ -2.11
TRM3YDL112W VID28P40547 921 aa1.89□□□□□ -2.11
TRM3YDL112W RLP7P40693 322 aaKnown RBP1.89□□□□□ -2.11
TRM3YDL112W SNO2P53823 222 aa1.89□□□□□ -2.11
TRM3YDL112W YKR011CQ02209 353 aa1.89□□□□□ -2.11
TRM3YDL112W LEE1Q02799 301 aaKnown RBP1.89□□□□□ -2.11
TRM3YDL112W REH1Q06709 432 aa1.89□□□□□ -2.11
TRM3YDL112W RXT3Q07458 294 aa1.89□□□□□ -2.11
TRM3YDL112W SMC5Q08204 1093 aa1.89□□□□□ -2.11
TRM3YDL112W YPL277CQ08989 487 aa1.89□□□□□ -2.11
TRM3YDL112W CCH1P50077 2039 aa1.89□□□□□ -2.11
TRM3YDL112W SPE1P08432 466 aa1.89□□□□□ -2.11
TRM3YDL112W GAA1P39012 614 aa1.89□□□□□ -2.11
TRM3YDL112W JSN1P47135 1091 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
TRM3YDL112W DAM1P53267 343 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms