RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W PUS2P53167 370 aa10.77□□□□□ -0.68
MSF1YPR047W YNL144CP53907 740 aa10.77□□□□□ -0.68
MSF1YPR047W KRE33P53914 1056 aaKnown RBP10.77□□□□□ -0.68
MSF1YPR047W AIM32Q04689 311 aa10.77□□□□□ -0.68
MSF1YPR047W SIL1Q08199 421 aa10.77□□□□□ -0.68
MSF1YPR047W PIN2Q12057 282 aa10.77□□□□□ -0.68
MSF1YPR047W EMP46Q12396 444 aa10.77□□□□□ -0.68
MSF1YPR047W VMA4P22203 233 aaKnown RBP10.76□□□□□ -0.69
MSF1YPR047W SMC1P32908 1225 aa10.76□□□□□ -0.69
MSF1YPR047W PPX1P38698 397 aa10.76□□□□□ -0.69
MSF1YPR047W DUN1P39009 513 aa10.76□□□□□ -0.69
MSF1YPR047W PCF11P39081 626 aaPredicted RBP10.76□□□□□ -0.69
MSF1YPR047W UBP7P40453 1071 aa10.76□□□□□ -0.69
MSF1YPR047W YJR079WP47126 109 aa10.76□□□□□ -0.69
MSF1YPR047W COP1P53622 1201 aaKnown RBP10.76□□□□□ -0.69
MSF1YPR047W HPF1Q05164 967 aa10.76□□□□□ -0.69
MSF1YPR047W JIP5Q06214 492 aaPredicted RBP10.76□□□□□ -0.69
MSF1YPR047W RPN12P32496 274 aa10.75□□□□□ -0.69
MSF1YPR047W STE13P33894 931 aa10.75□□□□□ -0.69
MSF1YPR047W DAN4P47179 1161 aa10.75□□□□□ -0.69
MSF1YPR047W VEL1P53058 206 aa10.75□□□□□ -0.69
MSF1YPR047W YMR206WQ03695 313 aa10.75□□□□□ -0.69
MSF1YPR047W RPS6AP0CX37 236 aaKnown RBP10.75□□□□□ -0.69
MSF1YPR047W RPS6BP0CX38 236 aaPredicted RBP10.75□□□□□ -0.69
MSF1YPR047W RTT101P47050 842 aa10.75□□□□□ -0.69
MSF1YPR047W FLC3P53121 802 aa10.75□□□□□ -0.69
MSF1YPR047W THI20Q08224 551 aa10.75□□□□□ -0.69
MSF1YPR047W HMI1Q12039 706 aa10.75□□□□□ -0.69
MSF1YPR047W SPO21Q12411 609 aa10.75□□□□□ -0.69
MSF1YPR047W ARF2P19146 181 aaKnown RBP10.74□□□□□ -0.69
MSF1YPR047W YIH1P25637 258 aa10.74□□□□□ -0.69
MSF1YPR047W SRB2P34162 210 aa10.74□□□□□ -0.69
MSF1YPR047W SHM1P37292 490 aaPredicted RBP10.74□□□□□ -0.69
MSF1YPR047W HSL7P38274 827 aa10.74□□□□□ -0.69
MSF1YPR047W EXO5P38289 585 aa10.74□□□□□ -0.69
MSF1YPR047W PYK2P52489 506 aaKnown RBP10.74□□□□□ -0.69
MSF1YPR047W TRM112P53738 135 aaPredicted RBP10.74□□□□□ -0.69
MSF1YPR047W TDA7P53882 636 aaPredicted RBP10.74□□□□□ -0.69
MSF1YPR047W NDD1Q08887 554 aa10.74□□□□□ -0.69
MSF1YPR047W ACC1Q00955 2233 aaKnown RBP10.73□□□□□ -0.69
MSF1YPR047W PAB1P04147 577 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
MSF1YPR047W ATE1P16639 503 aa10.73□□□□□ -0.69
MSF1YPR047W MET22P32179 357 aa10.73□□□□□ -0.69
MSF1YPR047W SEC6P32844 805 aa10.73□□□□□ -0.69
MSF1YPR047W SAP190P36123 1033 aa10.73□□□□□ -0.69
MSF1YPR047W PXL1P36166 706 aa10.73□□□□□ -0.69
MSF1YPR047W PIK1P39104 1066 aa10.73□□□□□ -0.69
MSF1YPR047W PRP24P49960 444 aaKnown RBP10.73□□□□□ -0.69
MSF1YPR047W NUP84P52891 726 aa10.73□□□□□ -0.69
MSF1YPR047W SMA1Q02651 245 aa10.73□□□□□ -0.69
MSF1YPR047W TUP1P16649 713 aa10.72□□□□□ -0.69
MSF1YPR047W MSH3P25336 1018 aa10.72□□□□□ -0.69
MSF1YPR047W IME2P32581 645 aa10.72□□□□□ -0.69
MSF1YPR047W SNZ3P43545 298 aa10.72□□□□□ -0.69
MSF1YPR047W BST1P43571 1029 aa10.72□□□□□ -0.69
MSF1YPR047W TAD1P53065 400 aa10.72□□□□□ -0.69
MSF1YPR047W SNZ2P53824 298 aa10.72□□□□□ -0.69
MSF1YPR047W YSH1Q06224 779 aaPredicted RBP10.72□□□□□ -0.69
MSF1YPR047W AIM39Q08223 395 aa10.72□□□□□ -0.69
MSF1YPR047W YOR059CQ08448 450 aaKnown RBP10.72□□□□□ -0.69
MSF1YPR047W BI2P03873 423 aa10.71□□□□□ -0.69
MSF1YPR047W BI4P03879 638 aa10.71□□□□□ -0.69
MSF1YPR047W CYC8P14922 966 aa10.71□□□□□ -0.69
MSF1YPR047W PUT4P15380 627 aa10.71□□□□□ -0.69
MSF1YPR047W URA8P38627 578 aaPredicted RBP10.71□□□□□ -0.69
MSF1YPR047W EXO1P39875 702 aa10.71□□□□□ -0.69
MSF1YPR047W PUF2Q12221 1075 aaKnown RBP RIP-Chip data10.71□□□□□ -0.69not detected
MSF1YPR047W BI3Q9ZZW7 517 aa10.71□□□□□ -0.69
MSF1YPR047W MSP1P28737 362 aa10.7□□□□□ -0.7
MSF1YPR047W SEC65P29478 273 aa10.7□□□□□ -0.7
MSF1YPR047W TDA3P38758 523 aa10.7□□□□□ -0.7
MSF1YPR047W CRP1P38845 465 aaKnown RBP10.7□□□□□ -0.7
MSF1YPR047W YER189WP40104 122 aa10.7□□□□□ -0.7
MSF1YPR047W HXT8P40886 569 aa10.7□□□□□ -0.7
MSF1YPR047W KTR6P54070 446 aa10.7□□□□□ -0.7
MSF1YPR047W PEX13P80667 386 aa10.7□□□□□ -0.7
MSF1YPR047W RPN4Q03465 531 aa10.7□□□□□ -0.7
MSF1YPR047W CLU1Q03690 1277 aaKnown RBP10.7□□□□□ -0.7
MSF1YPR047W GYL1Q04322 720 aa10.7□□□□□ -0.7
MSF1YPR047W AAD4Q07747 329 aa10.7□□□□□ -0.7
MSF1YPR047W CLP1Q08685 445 aaPredicted RBP10.7□□□□□ -0.7
MSF1YPR047W VPS5Q92331 675 aa10.7□□□□□ -0.7
MSF1YPR047W KAR3P17119 729 aa10.69□□□□□ -0.7
MSF1YPR047W SEC1P30619 724 aaKnown RBP10.69□□□□□ -0.7
MSF1YPR047W RRN6P32786 894 aa10.69□□□□□ -0.7
MSF1YPR047W SAP185P40856 1058 aa10.69□□□□□ -0.7
MSF1YPR047W RSM7P47150 247 aa10.69□□□□□ -0.7
MSF1YPR047W YCS4Q06156 1176 aa10.69□□□□□ -0.7
MSF1YPR047W YLR012CQ07927 99 aa10.69□□□□□ -0.7
MSF1YPR047W RAD3P06839 778 aa10.68□□□□□ -0.7
MSF1YPR047W LYS9P38999 446 aa10.68□□□□□ -0.7
MSF1YPR047W VFA1P40080 203 aa10.68□□□□□ -0.7
MSF1YPR047W YAP5P40574 245 aa10.68□□□□□ -0.7
MSF1YPR047W MMM1P41800 426 aa10.68□□□□□ -0.7
MSF1YPR047W MRX6P48564 524 aa10.68□□□□□ -0.7
MSF1YPR047W HEL2Q05580 639 aaKnown RBP10.68□□□□□ -0.7
MSF1YPR047W RSB1Q08417 382 aa10.68□□□□□ -0.7
MSF1YPR047W STB3Q12427 513 aa10.68□□□□□ -0.7
MSF1YPR047W EST1P17214 699 aaPredicted RBP10.67□□□□□ -0.7
MSF1YPR047W YJU3P28321 313 aa10.67□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 420.4 ms