RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	YDL124W	Q07551	312 aa	Known RBP	2.75	□□□□□ -1.97
LCL1	YPL056C	YEH2	Q07950	538 aa		2.75	□□□□□ -1.97
LCL1	YPL056C	BUD20	Q08004	166 aa	Predicted RBP	2.75	□□□□□ -1.97
LCL1	YPL056C	RIM20	Q12033	661 aa		2.75	□□□□□ -1.97
LCL1	YPL056C	ATG29	Q12092	213 aa		2.75	□□□□□ -1.97
LCL1	YPL056C	YDL109C	Q12103	647 aa		2.75	□□□□□ -1.97
LCL1	YPL056C	MDM20	Q12387	796 aa	Known RBP	2.75	□□□□□ -1.97
LCL1	YPL056C	FIG2	P25653	1609 aa		2.75	□□□□□ -1.97
LCL1	YPL056C	YLR278C	Q05854	1341 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	RPL24A	P04449	155 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	RPL22A	P05749	121 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	SPS1	P08458	490 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	MTF2	P10849	440 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	MSD1	P15179	658 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	KAR2	P16474	682 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	DBP3	P20447	523 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	SIT4	P20604	311 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	KIN3	P22209	435 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	URE2	P23202	354 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	SWI4	P25302	1093 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	PEP3	P27801	918 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	SEC65	P29478	273 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	MLS1	P30952	554 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	SRB4	P32569	687 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	AFR1	P33304	620 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	CPR5	P35176	225 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	GLG1	P36143	616 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	MET1	P36150	593 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	SHM1	P37292	490 aa	Predicted RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	MAL31	P38156	614 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	YHL017W	P38745	532 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	CCT2	P39076	527 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	GDH3	P39708	457 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	OAF1	P39720	1047 aa	Predicted RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	SMX2	P40204	77 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	PCI8	P40512	444 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	PAC11	P40960	533 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	YFL066C	P43538	392 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	SWP82	P43554	623 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	MDE1	P47095	244 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	BIR1	P47134	954 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	HGH1	P48362	394 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	ISM1	P48526	1002 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	TRF5	P48561	642 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	STB4	P50104	949 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	PSP2	P50109	593 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	PSP1	P50896	841 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	YBP2	P53169	641 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	PEF1	P53238	335 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	ARC35	P53731	342 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	FPK1	P53739	893 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	CNM67	P53865	581 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	MDM1	Q01846	1127 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	FDC1	Q03034	503 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	FCP1	Q03254	732 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	ABZ2	Q03266	374 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	VPS64	Q03944	604 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	HMO1	Q03973	246 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	SHE9	Q04172	456 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	ARP9	Q05123	467 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	SVF1	Q05515	481 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	ATG38	Q05789	226 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	YCS4	Q06156	1176 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	GIC2	Q06648	383 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	DTD1	Q07648	150 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	MLH2	Q07980	695 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	SIL1	Q08199	421 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	SGT1	Q08446	395 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	TRE1	Q08919	783 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	NEW1	Q08972	1196 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	ICL2	Q12031	575 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	BAG7	Q12128	409 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	MNL2	Q12205	849 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	SNU23	Q12368	194 aa	Predicted RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	DBP10	Q12389	995 aa	Known RBP	2.74	□□□□□ -1.97
LCL1	YPL056C	EMP46	Q12396	444 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	ERP4	Q12450	207 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	PMD1	P32634	1753 aa		2.74	□□□□□ -1.97
LCL1	YPL056C	SEM1	O94742	89 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	MPH2	P0CD99	609 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	HMG2	P12684	1045 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	GLN4	P13188	809 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	SRV2	P17555	526 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	HSP60	P19882	572 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	SPO11	P23179	398 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	ILV6	P25605	309 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	PWP2	P25635	923 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	PAT1	P25644	796 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	PRR1	P28708	518 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	NAM7	P30771	971 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	CRM1	P30822	1084 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	EFT1	P32324	842 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	HXT1	P32465	570 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	PRP19	P32523	503 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	YBL055C	P34220	418 aa	Predicted RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	LRG1	P35688	1017 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	MYO3	P36006	1272 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	TEF4	P36008	412 aa	Known RBP	2.73	□□□□□ -1.97
LCL1	YPL056C	SPC42	P36094	363 aa		2.73	□□□□□ -1.97
LCL1	YPL056C	ADE17	P38009	592 aa	Known RBP	2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms