RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W CLF1Q12309 687 aaPredicted RBP2.42□□□□□ -2.02
VPS34YLR240W ECM3Q99252 613 aa2.42□□□□□ -2.02
VPS34YLR240W BCK1Q01389 1478 aa2.41□□□□□ -2.02
VPS34YLR240W PET127P32606 800 aa2.41□□□□□ -2.02
VPS34YLR240W SEC6P32844 805 aa2.41□□□□□ -2.02
VPS34YLR240W SFB3P38810 929 aa2.41□□□□□ -2.02
VPS34YLR240W YNL195CP40168 261 aa2.41□□□□□ -2.02
VPS34YLR240W SMX3P54999 86 aaPredicted RBP2.41□□□□□ -2.02
VPS34YLR240W ERG20P08524 352 aaKnown RBP2.41□□□□□ -2.02
VPS34YLR240W SWI6P09959 803 aa2.41□□□□□ -2.02
VPS34YLR240W YPT7P32939 208 aa2.41□□□□□ -2.02
VPS34YLR240W MTH1P35198 433 aa2.41□□□□□ -2.02
VPS34YLR240W BIT2P38346 545 aa2.41□□□□□ -2.02
VPS34YLR240W OAF1P39720 1047 aaPredicted RBP2.41□□□□□ -2.02
VPS34YLR240W GPP1P41277 250 aaKnown RBP2.41□□□□□ -2.02
VPS34YLR240W ECM9Q02202 377 aa2.41□□□□□ -2.02
VPS34YLR240W YLR407WQ06070 228 aa2.41□□□□□ -2.02
VPS34YLR240W ISA1Q07821 250 aaPredicted RBP2.41□□□□□ -2.02
VPS34YLR240W YTM1Q12024 460 aaPredicted RBP2.41□□□□□ -2.02
VPS34YLR240W YKU70P32807 602 aa2.4□□□□□ -2.02
VPS34YLR240W PHO11P35842 467 aa2.4□□□□□ -2.02
VPS34YLR240W PHO12P38693 467 aa2.4□□□□□ -2.02
VPS34YLR240W HXT6P39003 570 aaKnown RBP2.4□□□□□ -2.02
VPS34YLR240W HXT7P39004 570 aa2.4□□□□□ -2.02
VPS34YLR240W QRI1P43123 477 aaKnown RBP2.4□□□□□ -2.02
VPS34YLR240W BFA1P47113 574 aa2.4□□□□□ -2.02
VPS34YLR240W GND2P53319 492 aa2.4□□□□□ -2.02
VPS34YLR240W HFD1Q04458 532 aa2.4□□□□□ -2.02
VPS34YLR240W IRC10Q08118 586 aa2.4□□□□□ -2.02
VPS34YLR240W DIA2Q08496 732 aaPredicted RBP2.4□□□□□ -2.02
VPS34YLR240W FAP7Q12055 197 aaPredicted RBP2.4□□□□□ -2.02
VPS34YLR240W APM4Q99186 491 aa2.4□□□□□ -2.02
VPS34YLR240W YLR419WQ06698 1435 aaKnown RBP2.4□□□□□ -2.02
VPS34YLR240W FRS1P15624 595 aaKnown RBP2.4□□□□□ -2.03
VPS34YLR240W THR1P17423 357 aaKnown RBP2.4□□□□□ -2.03
VPS34YLR240W OAF3P36023 863 aa2.4□□□□□ -2.03
VPS34YLR240W UBP12P39538 1254 aa2.4□□□□□ -2.03
VPS34YLR240W MNN11P46985 422 aaKnown RBP2.4□□□□□ -2.03
VPS34YLR240W RCR2Q03446 210 aaKnown RBP2.4□□□□□ -2.03
VPS34YLR240W YMR210WQ03649 449 aa2.4□□□□□ -2.03
VPS34YLR240W VPS36Q06696 566 aa2.4□□□□□ -2.03
VPS34YLR240W VHS3Q08438 674 aa2.4□□□□□ -2.03
VPS34YLR240W POM34Q12445 299 aa2.4□□□□□ -2.03
VPS34YLR240W IME1P21190 360 aa2.39□□□□□ -2.03
VPS34YLR240W BIT61P47041 543 aa2.39□□□□□ -2.03
VPS34YLR240W NOP15P53927 220 aaPredicted RBP2.39□□□□□ -2.03
VPS34YLR240W YPS7Q06325 596 aa2.39□□□□□ -2.03
VPS34YLR240W HFI1Q12060 488 aa2.39□□□□□ -2.03
VPS34YLR240W MRH1Q12117 320 aaPredicted RBP2.39□□□□□ -2.03
VPS34YLR240W ZRT2Q12436 422 aa2.39□□□□□ -2.03
VPS34YLR240W RPS21BQ3E754 87 aaKnown RBP2.39□□□□□ -2.03
VPS34YLR240W PDR11P40550 1411 aa2.39□□□□□ -2.03
VPS34YLR240W USO1P25386 1790 aa2.39□□□□□ -2.03
VPS34YLR240W PRP28P23394 588 aa2.39□□□□□ -2.03
VPS34YLR240W BCS1P32839 456 aa2.39□□□□□ -2.03
VPS34YLR240W DID4P36108 232 aa2.39□□□□□ -2.03
VPS34YLR240W CBR1P38626 284 aaKnown RBP2.39□□□□□ -2.03
VPS34YLR240W YAP3P38749 330 aa2.39□□□□□ -2.03
VPS34YLR240W PIG2P40187 538 aa2.39□□□□□ -2.03
VPS34YLR240W NDC80P40460 691 aa2.39□□□□□ -2.03
VPS34YLR240W STU2P46675 888 aa2.39□□□□□ -2.03
VPS34YLR240W VBA4Q04602 768 aaKnown RBP2.39□□□□□ -2.03
VPS34YLR240W MLH3Q12083 715 aa2.39□□□□□ -2.03
VPS34YLR240W TAF3Q12297 353 aa2.39□□□□□ -2.03
VPS34YLR240W RPS17AP02407 136 aaKnown RBP2.38□□□□□ -2.03
VPS34YLR240W RPP0P05317 312 aaKnown RBP2.38□□□□□ -2.03
VPS34YLR240W RPS17BP14127 136 aaKnown RBP2.38□□□□□ -2.03
VPS34YLR240W KIN82P25341 720 aa2.38□□□□□ -2.03
VPS34YLR240W FEN2P25621 512 aaKnown RBP2.38□□□□□ -2.03
VPS34YLR240W SEC65P29478 273 aa2.38□□□□□ -2.03
VPS34YLR240W GRX4P32642 244 aa2.38□□□□□ -2.03
VPS34YLR240W BDH2P39713 417 aa2.38□□□□□ -2.03
VPS34YLR240W ARG2P40360 574 aa2.38□□□□□ -2.03
VPS34YLR240W IES1P43579 692 aa2.38□□□□□ -2.03
VPS34YLR240W ATG4P53867 494 aa2.38□□□□□ -2.03
VPS34YLR240W CHS5Q12114 671 aaKnown RBP2.38□□□□□ -2.03
VPS34YLR240W USV1Q12132 391 aa2.38□□□□□ -2.03
VPS34YLR240W SNF2P22082 1703 aa2.38□□□□□ -2.03
VPS34YLR240W CCT7P42943 550 aaKnown RBP2.38□□□□□ -2.03
VPS34YLR240W PTA1Q01329 785 aaPredicted RBP2.38□□□□□ -2.03
VPS34YLR240W YHM2Q04013 314 aa2.38□□□□□ -2.03
VPS34YLR240W STP4Q07351 490 aa2.38□□□□□ -2.03
VPS34YLR240W TAD3Q9URQ3 322 aa2.38□□□□□ -2.03
VPS34YLR240W RPS21AP0C0V8 87 aaKnown RBP2.38□□□□□ -2.03
VPS34YLR240W PRP22P24384 1145 aaKnown RBP2.38□□□□□ -2.03
VPS34YLR240W SET3P36124 751 aa2.38□□□□□ -2.03
VPS34YLR240W UBS1P38290 277 aa2.38□□□□□ -2.03
VPS34YLR240W YJL206CP39529 758 aa2.38□□□□□ -2.03
VPS34YLR240W YEN1P40028 759 aa2.38□□□□□ -2.03
VPS34YLR240W BUD8P41698 603 aa2.38□□□□□ -2.03
VPS34YLR240W RFX1P48743 811 aa2.38□□□□□ -2.03
VPS34YLR240W PPN1Q04119 674 aa2.38□□□□□ -2.03
VPS34YLR240W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
VPS34YLR240W APC1P53886 1748 aa2.37□□□□□ -2.03
VPS34YLR240W RPS9BP05755 195 aaKnown RBP2.37□□□□□ -2.03
VPS34YLR240W GLN4P13188 809 aaKnown RBP2.37□□□□□ -2.03
VPS34YLR240W KIN3P22209 435 aa2.37□□□□□ -2.03
VPS34YLR240W FAT1P38225 669 aa2.37□□□□□ -2.03
VPS34YLR240W YIL077CP40508 320 aa2.37□□□□□ -2.03
VPS34YLR240W PXA1P41909 870 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms