RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C PHO3P24031 467 aa5.03□□□□□ -1.6
CAF4YKR036C MRX3P38172 270 aa5.03□□□□□ -1.6
CAF4YKR036C TSC10P38342 320 aa5.03□□□□□ -1.6
CAF4YKR036C MMS21P38632 267 aa5.03□□□□□ -1.6
CAF4YKR036C KSP1P38691 1029 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C YHR020WP38708 688 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C GGA2P38817 585 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C HXT6P39003 570 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C HXT7P39004 570 aa5.03□□□□□ -1.6
CAF4YKR036C OAF1P39720 1047 aaPredicted RBP5.03□□□□□ -1.6
CAF4YKR036C YJL055WP47044 245 aa5.03□□□□□ -1.6
CAF4YKR036C GCV2P49095 1034 aa5.03□□□□□ -1.6
CAF4YKR036C UTP6Q02354 440 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C YDR239CQ03780 787 aa5.03□□□□□ -1.6
CAF4YKR036C UTP14Q04500 899 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C YOL036WQ08206 761 aa5.03□□□□□ -1.6
CAF4YKR036C CDC53Q12018 815 aaKnown RBP5.03□□□□□ -1.6
CAF4YKR036C NBL1Q3E7Y6 73 aa5.03□□□□□ -1.6
CAF4YKR036C VPS13Q07878 3144 aa5.03□□□□□ -1.6
CAF4YKR036C RAD18P10862 487 aa5.02□□□□□ -1.61
CAF4YKR036C ALG1P16661 449 aa5.02□□□□□ -1.61
CAF4YKR036C SIS1P25294 352 aaKnown RBP5.02□□□□□ -1.61
CAF4YKR036C CHS3P29465 1165 aa5.02□□□□□ -1.61
CAF4YKR036C UTR4P32626 227 aa5.02□□□□□ -1.61
CAF4YKR036C BCS1P32839 456 aa5.02□□□□□ -1.61
CAF4YKR036C RPT5P33297 434 aaKnown RBP5.02□□□□□ -1.61
CAF4YKR036C TRM2P33753 639 aa5.02□□□□□ -1.61
CAF4YKR036C MNN2P38069 597 aa5.02□□□□□ -1.61
CAF4YKR036C SLM4P38247 162 aa5.02□□□□□ -1.61
CAF4YKR036C YHR112CP38716 378 aa5.02□□□□□ -1.61
CAF4YKR036C RPH1P39956 796 aa5.02□□□□□ -1.61
CAF4YKR036C PCI8P40512 444 aa5.02□□□□□ -1.61
CAF4YKR036C GCD14P46959 383 aaPredicted RBP5.02□□□□□ -1.61
CAF4YKR036C PTK2P47116 818 aaKnown RBP5.02□□□□□ -1.61
CAF4YKR036C HAM1P47119 197 aaKnown RBP5.02□□□□□ -1.61
CAF4YKR036C VMA10P48836 114 aaKnown RBP5.02□□□□□ -1.61
CAF4YKR036C YGR125WP53273 1036 aa5.02□□□□□ -1.61
CAF4YKR036C MDM1Q01846 1127 aa5.02□□□□□ -1.61
CAF4YKR036C SHR3Q02774 210 aa5.02□□□□□ -1.61
CAF4YKR036C SLU7Q02775 382 aaKnown RBP5.02□□□□□ -1.61
CAF4YKR036C BUL2Q03758 920 aaKnown RBP5.02□□□□□ -1.61
CAF4YKR036C SEC10Q06245 871 aa5.02□□□□□ -1.61
CAF4YKR036C MCM21Q06675 368 aa5.02□□□□□ -1.61
CAF4YKR036C GPI13Q07830 1017 aa5.02□□□□□ -1.61
CAF4YKR036C SMC5Q08204 1093 aa5.02□□□□□ -1.61
CAF4YKR036C SOG2Q08817 791 aa5.02□□□□□ -1.61
CAF4YKR036C SAM3Q08986 587 aa5.02□□□□□ -1.61
CAF4YKR036C NMT1P14743 455 aa5.01□□□□□ -1.61
CAF4YKR036C CBF1P17106 351 aa5.01□□□□□ -1.61
CAF4YKR036C COQ1P18900 473 aa5.01□□□□□ -1.61
CAF4YKR036C RGR1P19263 1082 aa5.01□□□□□ -1.61
CAF4YKR036C EXO70P19658 623 aa5.01□□□□□ -1.61
CAF4YKR036C PRP6P19735 899 aaPredicted RBP5.01□□□□□ -1.61
CAF4YKR036C DBP1P24784 617 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C TSR4P25040 408 aa5.01□□□□□ -1.61
CAF4YKR036C HXT3P32466 567 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C YKL050CP35736 922 aa5.01□□□□□ -1.61
CAF4YKR036C SPC42P36094 363 aa5.01□□□□□ -1.61
CAF4YKR036C SET3P36124 751 aa5.01□□□□□ -1.61
CAF4YKR036C DIA4P38705 446 aaPredicted RBP5.01□□□□□ -1.61
CAF4YKR036C YHL050CP38721 697 aa5.01□□□□□ -1.61
CAF4YKR036C RRP8P38961 392 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C PES4P39684 611 aa5.01□□□□□ -1.61
CAF4YKR036C DLD3P39976 496 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C SWP82P43554 623 aa5.01□□□□□ -1.61
CAF4YKR036C ALB1P47019 175 aaPredicted RBP5.01□□□□□ -1.61
CAF4YKR036C RNR4P49723 345 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C MON1P53129 644 aa5.01□□□□□ -1.61
CAF4YKR036C YGR021WP53212 290 aa5.01□□□□□ -1.61
CAF4YKR036C HDA1P53973 706 aa5.01□□□□□ -1.61
CAF4YKR036C UBX4P54730 416 aa5.01□□□□□ -1.61
CAF4YKR036C RAD30Q04049 632 aa5.01□□□□□ -1.61
CAF4YKR036C ARP9Q05123 467 aa5.01□□□□□ -1.61
CAF4YKR036C SSQ1Q05931 657 aaPredicted RBP5.01□□□□□ -1.61
CAF4YKR036C YPR172WQ06608 200 aa5.01□□□□□ -1.61
CAF4YKR036C ACM1Q08981 209 aa5.01□□□□□ -1.61
CAF4YKR036C ATP16Q12165 160 aa5.01□□□□□ -1.61
CAF4YKR036C DBP10Q12389 995 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C SSB1P11484 613 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C SEN2P16658 377 aa5.01□□□□□ -1.61
CAF4YKR036C STF2P16965 84 aa5.01□□□□□ -1.61
CAF4YKR036C KGD2P19262 463 aaPredicted RBP5.01□□□□□ -1.61
CAF4YKR036C SAM2P19358 384 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C MEF1P25039 761 aa5.01□□□□□ -1.61
CAF4YKR036C YJU2P28320 278 aaPredicted RBP5.01□□□□□ -1.61
CAF4YKR036C SMY2P32909 740 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C RXT2P38255 430 aa5.01□□□□□ -1.61
CAF4YKR036C MSC7P38694 644 aa5.01□□□□□ -1.61
CAF4YKR036C YHL012WP38709 493 aa5.01□□□□□ -1.61
CAF4YKR036C YHL008CP38750 627 aa5.01□□□□□ -1.61
CAF4YKR036C TRM5P38793 499 aa5.01□□□□□ -1.61
CAF4YKR036C GDH3P39708 457 aa5.01□□□□□ -1.61
CAF4YKR036C LCP5P40079 357 aaPredicted RBP5.01□□□□□ -1.61
CAF4YKR036C SSB2P40150 613 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C PFK26P40433 827 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C TRF5P48561 642 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C PSP2P50109 593 aaKnown RBP5.01□□□□□ -1.61
CAF4YKR036C ZIP2P53061 704 aa5.01□□□□□ -1.61
CAF4YKR036C YGL108CP53139 140 aa5.01□□□□□ -1.61
CAF4YKR036C RBG2P53295 368 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms