RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C RIA1P53893 1110 aa2.56□□□□□ -2
VPS35YJL154C TIM44Q01852 431 aa2.56□□□□□ -2
VPS35YJL154C HMO1Q03973 246 aaKnown RBP2.56□□□□□ -2
VPS35YJL154C ADY4Q05955 493 aa2.56□□□□□ -2
VPS35YJL154C CHS5Q12114 671 aaKnown RBP2.56□□□□□ -2
VPS35YJL154C TUB2P02557 457 aaKnown RBP2.55□□□□□ -2
VPS35YJL154C GAL1P04385 528 aa2.55□□□□□ -2
VPS35YJL154C PRP28P23394 588 aa2.55□□□□□ -2
VPS35YJL154C FEN2P25621 512 aaKnown RBP2.55□□□□□ -2
VPS35YJL154C MSH1P25846 959 aa2.55□□□□□ -2
VPS35YJL154C LYS9P38999 446 aa2.55□□□□□ -2
VPS35YJL154C FMP52P40008 231 aa2.55□□□□□ -2
VPS35YJL154C UBC11P52492 156 aa2.55□□□□□ -2
VPS35YJL154C ERG5P54781 538 aa2.55□□□□□ -2
VPS35YJL154C RCR2Q03446 210 aaKnown RBP2.55□□□□□ -2
VPS35YJL154C THI22Q06490 572 aa2.55□□□□□ -2
VPS35YJL154C HIM1Q06674 414 aa2.55□□□□□ -2
VPS35YJL154C CDC26P14724 124 aa2.55□□□□□ -2
VPS35YJL154C BCS1P32839 456 aa2.55□□□□□ -2
VPS35YJL154C TGL1P34163 548 aa2.55□□□□□ -2
VPS35YJL154C DEF1P35732 738 aaKnown RBP2.55□□□□□ -2
VPS35YJL154C PPE1P38796 400 aa2.55□□□□□ -2
VPS35YJL154C SSP120P39931 234 aaKnown RBP2.55□□□□□ -2
VPS35YJL154C HOS4P40480 1083 aa2.55□□□□□ -2
VPS35YJL154C PRM2P40534 656 aa2.55□□□□□ -2
VPS35YJL154C BAP3P41815 604 aa2.55□□□□□ -2
VPS35YJL154C PAN2P53010 1115 aaPredicted RBP2.55□□□□□ -2
VPS35YJL154C UBX4P54730 416 aa2.55□□□□□ -2
VPS35YJL154C TGL2P54857 326 aa2.55□□□□□ -2
VPS35YJL154C SSL2Q00578 843 aa2.55□□□□□ -2
VPS35YJL154C RRP6Q12149 733 aaKnown RBP2.55□□□□□ -2
VPS35YJL154C GEA2P39993 1459 aaKnown RBP2.55□□□□□ -2
VPS35YJL154C TUF1P02992 437 aaKnown RBP2.55□□□□□ -2
VPS35YJL154C HMG2P12684 1045 aa2.55□□□□□ -2
VPS35YJL154C MF(ALPHA)2P32435 120 aa2.55□□□□□ -2
VPS35YJL154C SCS2P40075 244 aaKnown RBP2.55□□□□□ -2
VPS35YJL154C TEL2P53038 688 aa2.55□□□□□ -2
VPS35YJL154C YMR206WQ03695 313 aa2.55□□□□□ -2
VPS35YJL154C ATG16Q03818 150 aa2.55□□□□□ -2
VPS35YJL154C YCG1Q06680 1035 aa2.55□□□□□ -2
VPS35YJL154C YLR040CQ07988 224 aa2.55□□□□□ -2
VPS35YJL154C YOL073CQ08232 322 aa2.55□□□□□ -2
VPS35YJL154C MCH5Q08777 521 aa2.55□□□□□ -2
VPS35YJL154C PGI1P12709 554 aaKnown RBP2.54□□□□□ -2
VPS35YJL154C IRC5P43610 853 aa2.54□□□□□ -2
VPS35YJL154C ATG36P46983 293 aa2.54□□□□□ -2
VPS35YJL154C CEF1Q03654 590 aaPredicted RBP2.54□□□□□ -2
VPS35YJL154C YFT2Q06676 274 aa2.54□□□□□ -2
VPS35YJL154C HBT1Q07653 1046 aaKnown RBP2.54□□□□□ -2
VPS35YJL154C YOL114CQ12322 202 aa2.54□□□□□ -2
VPS35YJL154C RPO31P04051 1460 aa2.54□□□□□ -2
VPS35YJL154C TOP1P04786 769 aa2.54□□□□□ -2
VPS35YJL154C IME1P21190 360 aa2.54□□□□□ -2
VPS35YJL154C CBP3P21560 335 aa2.54□□□□□ -2
VPS35YJL154C PWP2P25635 923 aaKnown RBP2.54□□□□□ -2
VPS35YJL154C PHO11P35842 467 aa2.54□□□□□ -2
VPS35YJL154C PPS1P38148 807 aa2.54□□□□□ -2
VPS35YJL154C PHO12P38693 467 aa2.54□□□□□ -2
VPS35YJL154C PCL5P38794 229 aa2.54□□□□□ -2
VPS35YJL154C YEL025CP39991 1188 aa2.54□□□□□ -2
VPS35YJL154C TMN3P40071 706 aa2.54□□□□□ -2
VPS35YJL154C RFX1P48743 811 aa2.54□□□□□ -2
VPS35YJL154C TEP1P53916 434 aa2.54□□□□□ -2
VPS35YJL154C ARP7Q12406 477 aa2.54□□□□□ -2
VPS35YJL154C CTT1P06115 562 aa2.53□□□□□ -2
VPS35YJL154C VAS1P07806 1104 aaKnown RBP2.53□□□□□ -2
VPS35YJL154C CWH43P25618 953 aa2.53□□□□□ -2
VPS35YJL154C PRE4P30657 266 aa2.53□□□□□ -2
VPS35YJL154C PET309P32522 965 aaPredicted RBP2.53□□□□□ -2
VPS35YJL154C HSL1P34244 1518 aa2.53□□□□□ -2
VPS35YJL154C ARG2P40360 574 aa2.53□□□□□ -2
VPS35YJL154C MPS3P47069 682 aa2.53□□□□□ -2
VPS35YJL154C TAH11P47112 604 aa2.53□□□□□ -2
VPS35YJL154C MSE1P48525 536 aa2.53□□□□□ -2
VPS35YJL154C FDC1Q03034 503 aa2.53□□□□□ -2
VPS35YJL154C YSH1Q06224 779 aaPredicted RBP2.53□□□□□ -2
VPS35YJL154C YDL086WQ07505 273 aa2.53□□□□□ -2
VPS35YJL154C USV1Q12132 391 aa2.53□□□□□ -2
VPS35YJL154C TRM13Q12383 476 aa2.53□□□□□ -2
VPS35YJL154C PCK1P10963 549 aa2.53□□□□□ -2
VPS35YJL154C CDC43P18898 376 aa2.53□□□□□ -2
VPS35YJL154C HOP1P20050 605 aa2.53□□□□□ -2
VPS35YJL154C FUB1P25659 250 aa2.53□□□□□ -2
VPS35YJL154C DHR2P36009 735 aaPredicted RBP2.53□□□□□ -2
VPS35YJL154C APL3P38065 1025 aa2.53□□□□□ -2
VPS35YJL154C YHL017WP38745 532 aa2.53□□□□□ -2
VPS35YJL154C THI6P41835 540 aa2.53□□□□□ -2
VPS35YJL154C ACF2Q12168 779 aa2.53□□□□□ -2
VPS35YJL154C TUP1P16649 713 aa2.52□□□□□ -2.01
VPS35YJL154C VPS24P36095 224 aaKnown RBP2.52□□□□□ -2.01
VPS35YJL154C BUL1P48524 976 aa2.52□□□□□ -2.01
VPS35YJL154C MNT2P53059 558 aa2.52□□□□□ -2.01
VPS35YJL154C PEF1P53238 335 aa2.52□□□□□ -2.01
VPS35YJL154C SUB1P54000 292 aaKnown RBP2.52□□□□□ -2.01
VPS35YJL154C HLR1Q04429 423 aa2.52□□□□□ -2.01
VPS35YJL154C CTP1P38152 299 aa2.52□□□□□ -2.01
VPS35YJL154C LNP1P38878 278 aa2.52□□□□□ -2.01
VPS35YJL154C FTR1P40088 404 aa2.52□□□□□ -2.01
VPS35YJL154C KIN4Q01919 800 aa2.52□□□□□ -2.01
VPS35YJL154C MFM1Q02783 413 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 1077.6 ms