RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W POP4P38336 279 aa14.47□□□□□ -0.09
RPN10YHR200W INA22P40576 216 aa14.47□□□□□ -0.09
RPN10YHR200W RSC8P43609 557 aaKnown RBP14.47□□□□□ -0.09
RPN10YHR200W VTC4P47075 721 aa14.47□□□□□ -0.09
RPN10YHR200W NUT1P53114 1132 aa14.47□□□□□ -0.09
RPN10YHR200W ADA2Q02336 434 aa14.47□□□□□ -0.09
RPN10YHR200W YDR278CQ05612 105 aa14.47□□□□□ -0.09
RPN10YHR200W YDR018CQ12185 396 aa14.47□□□□□ -0.09
RPN10YHR200W GCD6P32501 712 aaKnown RBP14.46□□□□□ -0.09
RPN10YHR200W MUD2P36084 527 aaKnown RBP14.46□□□□□ -0.09
RPN10YHR200W HSL7P38274 827 aa14.46□□□□□ -0.09
RPN10YHR200W VHC1P38329 1120 aa14.46□□□□□ -0.09
RPN10YHR200W MCM6P53091 1017 aaKnown RBP14.46□□□□□ -0.09
RPN10YHR200W PEX31P53203 462 aa14.46□□□□□ -0.09
RPN10YHR200W MRI1Q06489 411 aaKnown RBP14.46□□□□□ -0.09
RPN10YHR200W FAP7Q12055 197 aaPredicted RBP14.46□□□□□ -0.09
RPN10YHR200W PRP9P19736 530 aaKnown RBP14.45□□□□□ -0.1
RPN10YHR200W CAD1P24813 409 aaKnown RBP14.45□□□□□ -0.1
RPN10YHR200W MEI4P29467 408 aa14.45□□□□□ -0.1
RPN10YHR200W PLC1P32383 869 aa14.45□□□□□ -0.1
RPN10YHR200W YNL320WP42840 284 aa14.45□□□□□ -0.1
RPN10YHR200W GUF1P46943 645 aa14.45□□□□□ -0.1
RPN10YHR200W NMD5P46970 1048 aa14.45□□□□□ -0.1
RPN10YHR200W ASG7P46993 209 aa14.45□□□□□ -0.1
RPN10YHR200W VPS25P47142 202 aa14.45□□□□□ -0.1
RPN10YHR200W YNL011CP53980 444 aa14.45□□□□□ -0.1
RPN10YHR200W SND1Q04007 877 aa14.45□□□□□ -0.1
RPN10YHR200W DDC1Q08949 612 aa14.45□□□□□ -0.1
RPN10YHR200W RUD3Q12234 484 aaKnown RBP14.45□□□□□ -0.1
RPN10YHR200W RGR1P19263 1082 aa14.44□□□□□ -0.1
RPN10YHR200W YBR284WP38150 797 aa14.44□□□□□ -0.1
RPN10YHR200W MVP1P40959 511 aaKnown RBP14.44□□□□□ -0.1
RPN10YHR200W YGR283CP53336 341 aaPredicted RBP14.44□□□□□ -0.1
RPN10YHR200W MSH6Q03834 1242 aa14.44□□□□□ -0.1
RPN10YHR200W TPO1Q07824 586 aa14.44□□□□□ -0.1
RPN10YHR200W RCL1Q08096 367 aaPredicted RBP14.44□□□□□ -0.1
RPN10YHR200W LEA1Q08963 238 aaPredicted RBP14.44□□□□□ -0.1
RPN10YHR200W SEY1Q99287 776 aa14.44□□□□□ -0.1
RPN10YHR200W YKR023WP36119 530 aaKnown RBP14.43□□□□□ -0.1
RPN10YHR200W SSP1P38871 571 aa14.43□□□□□ -0.1
RPN10YHR200W SLG1P54867 378 aa14.43□□□□□ -0.1
RPN10YHR200W YPL062WQ02781 134 aa14.43□□□□□ -0.1
RPN10YHR200W STE23Q06010 1027 aa14.43□□□□□ -0.1
RPN10YHR200W YKL068W-AQ3E826 78 aa14.43□□□□□ -0.1
RPN10YHR200W APM4Q99186 491 aa14.43□□□□□ -0.1
RPN10YHR200W YML002WP0CF17 737 aa14.42□□□□□ -0.1
RPN10YHR200W ADH4P10127 382 aa14.42□□□□□ -0.1
RPN10YHR200W YME1P32795 747 aa14.42□□□□□ -0.1
RPN10YHR200W YFL052WP43551 465 aa14.42□□□□□ -0.1
RPN10YHR200W MET13P53128 600 aa14.42□□□□□ -0.1
RPN10YHR200W SPP1Q03012 353 aa14.42□□□□□ -0.1
RPN10YHR200W EAR1Q03212 550 aa14.42□□□□□ -0.1
RPN10YHR200W AAD4Q07747 329 aa14.42□□□□□ -0.1
RPN10YHR200W MNL2Q12205 849 aa14.42□□□□□ -0.1
RPN10YHR200W HRT3Q12347 344 aa14.42□□□□□ -0.1
RPN10YHR200W RAD1P06777 1100 aa14.41□□□□□ -0.1
RPN10YHR200W MAS1P10507 462 aa14.41□□□□□ -0.1
RPN10YHR200W PEP5P12868 1029 aa14.41□□□□□ -0.1
RPN10YHR200W PBP2P38151 413 aaKnown RBP RIP-Chip data14.41□□□□□ -0.1not detected
RPN10YHR200W AVT2P39981 480 aa14.41□□□□□ -0.1
RPN10YHR200W MNN11P46985 422 aaKnown RBP14.41□□□□□ -0.1
RPN10YHR200W MTD1Q02046 320 aaKnown RBP14.41□□□□□ -0.1
RPN10YHR200W ELP3Q02908 557 aaKnown RBP14.41□□□□□ -0.1
RPN10YHR200W HEH2Q03281 663 aa14.41□□□□□ -0.1
RPN10YHR200W PUF4P25339 888 aaKnown RBP RIP-Chip data14.4□□□□□ -0.1not detected
RPN10YHR200W YBR053CP38235 358 aa14.4□□□□□ -0.1
RPN10YHR200W SAW1P39735 261 aa14.4□□□□□ -0.1
RPN10YHR200W PCL10P53124 433 aa14.4□□□□□ -0.1
RPN10YHR200W COP1P53622 1201 aaKnown RBP14.4□□□□□ -0.1
RPN10YHR200W CPR6P53691 371 aaKnown RBP14.4□□□□□ -0.1
RPN10YHR200W RAD10P06838 210 aa14.39□□□□□ -0.11
RPN10YHR200W PRM9P39551 298 aa14.39□□□□□ -0.11
RPN10YHR200W FLC2P39719 783 aa14.39□□□□□ -0.11
RPN10YHR200W CDC1P40986 491 aa14.39□□□□□ -0.11
RPN10YHR200W SHR3Q02774 210 aa14.39□□□□□ -0.11
RPN10YHR200W HRD3Q05787 833 aa14.39□□□□□ -0.11
RPN10YHR200W YLL056CQ12177 298 aa14.39□□□□□ -0.11
RPN10YHR200W IZH4Q99393 312 aa14.39□□□□□ -0.11
RPN10YHR200W QCR6P00127 147 aa14.38□□□□□ -0.11
RPN10YHR200W PRC1P00729 532 aa14.38□□□□□ -0.11
RPN10YHR200W GCR1P07261 785 aa14.38□□□□□ -0.11
RPN10YHR200W POL3P15436 1097 aa14.38□□□□□ -0.11
RPN10YHR200W RAD27P26793 382 aa14.38□□□□□ -0.11
RPN10YHR200W TSA1P34760 196 aaKnown RBP14.38□□□□□ -0.11
RPN10YHR200W CDC27P38042 758 aa14.38□□□□□ -0.11
RPN10YHR200W DIA4P38705 446 aaPredicted RBP14.38□□□□□ -0.11
RPN10YHR200W CIN4P39110 191 aa14.38□□□□□ -0.11
RPN10YHR200W PXA1P41909 870 aa14.38□□□□□ -0.11
RPN10YHR200W YVH1Q02256 364 aaKnown RBP14.38□□□□□ -0.11
RPN10YHR200W AIM32Q04689 311 aa14.38□□□□□ -0.11
RPN10YHR200W OMS1Q06668 471 aa14.38□□□□□ -0.11
RPN10YHR200W CDC73Q06697 393 aa14.38□□□□□ -0.11
RPN10YHR200W ARP7Q12406 477 aa14.38□□□□□ -0.11
RPN10YHR200W IDI1P15496 288 aa14.37□□□□□ -0.11
RPN10YHR200W PGS1P25578 521 aa14.37□□□□□ -0.11
RPN10YHR200W RAD5P32849 1169 aaPredicted RBP14.37□□□□□ -0.11
RPN10YHR200W RFS1P38234 210 aaKnown RBP14.37□□□□□ -0.11
RPN10YHR200W CKB2P38930 258 aa14.37□□□□□ -0.11
RPN10YHR200W RFX1P48743 811 aa14.37□□□□□ -0.11
RPN10YHR200W COG6P53959 839 aa14.37□□□□□ -0.11
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms