RNA–Protein interactions for RNA: YDR205W

MSC2, Transcript of Endoplasmic reticulum zinc transporter, yeast

Gene MSC2, Length 2,175 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC2	YDR205W	COQ9	Q05779	260 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	NOP6	Q07623	225 aa	Known RBP	4.81	□□□□□ -1.64
MSC2	YDR205W	NUR1	Q12066	484 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	YDL206W	Q12424	762 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	RMP1	Q12530	201 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	RIF1	P29539	1916 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	MUD1	P32605	298 aa	Known RBP	4.81	□□□□□ -1.64
MSC2	YDR205W	YKL023W	P36103	277 aa	Known RBP	4.81	□□□□□ -1.64
MSC2	YDR205W	BSD2	P38356	321 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	NPP2	P39997	493 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	MRPS18	P42847	217 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	KAP114	P53067	1004 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	RSC4	Q02206	625 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	VTC3	Q02725	835 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	HEH2	Q03281	663 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	YMR018W	Q04364	514 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	NOC3	Q07896	663 aa	Predicted RBP	4.81	□□□□□ -1.64
MSC2	YDR205W	ALR1	Q08269	859 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	IES4	Q08561	116 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	PGC1	Q08959	321 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	MCD1	Q12158	566 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	TY3A-G	Q12173	290 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	TY3A-I	Q99219	290 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	GCR1	P07261	785 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	HVG1	P0CE11	249 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	ERG11	P10614	530 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	CDC48	P25694	835 aa	Known RBP	4.8	□□□□□ -1.64
MSC2	YDR205W	PAP1	P29468	568 aa	Known RBP	4.8	□□□□□ -1.64
MSC2	YDR205W	GCG1	P32656	232 aa	Known RBP	4.8	□□□□□ -1.64
MSC2	YDR205W	MOT2	P34909	587 aa	Known RBP	4.8	□□□□□ -1.64
MSC2	YDR205W	YKL050C	P35736	922 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	RCK2	P38623	610 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	GDH3	P39708	457 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	PIC2	P40035	300 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	PSY2	P40164	858 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	HSV2	P50079	448 aa	Predicted RBP	4.8	□□□□□ -1.64
MSC2	YDR205W	NPY1	P53164	384 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	RTT102	P53330	157 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	MEP3	P53390	489 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	SLD5	Q03406	294 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	SPC19	Q03954	165 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	OSW2	Q12202	724 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	CDC8	P00572	216 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	DED1	P06634	604 aa	Known RBP	4.8	□□□□□ -1.64
MSC2	YDR205W	KEX2	P13134	814 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	TEC1	P18412	486 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	KIP2	P28743	706 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	EFT1	P32324	842 aa	Known RBP	4.8	□□□□□ -1.64
MSC2	YDR205W	DPH2	P32461	534 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	IXR1	P33417	597 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	NIC96	P34077	839 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	PEX5	P35056	612 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	ERC1	P38767	581 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	RRF1	P38771	230 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	AVT1	P47082	602 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	RPA49	Q01080	415 aa	Predicted RBP	4.8	□□□□□ -1.64
MSC2	YDR205W	YMR114C	Q04471	368 aa	Known RBP	4.8	□□□□□ -1.64
MSC2	YDR205W	DAL4	Q04895	635 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	YMR321C	Q04898	105 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	DUS4	Q06063	367 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	TRE2	Q08693	809 aa		4.8	□□□□□ -1.64
MSC2	YDR205W	CDC33	P07260	213 aa	Known RBP	4.79	□□□□□ -1.64
MSC2	YDR205W	GFA1	P14742	717 aa	Known RBP	4.79	□□□□□ -1.64
MSC2	YDR205W	SPO16	P17122	198 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	GUT2	P32191	649 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	GCD11	P32481	527 aa	Known RBP	4.79	□□□□□ -1.64
MSC2	YDR205W	RGT1	P32862	1170 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	MUD2	P36084	527 aa	Known RBP	4.79	□□□□□ -1.64
MSC2	YDR205W	SEA4	P38164	1038 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	MGS1	P40151	587 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	PBP1	P53297	722 aa	Known RBP	4.79	□□□□□ -1.64
MSC2	YDR205W	YNL146W	P53906	100 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	YPL109C	Q02981	657 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	NSE5	Q03718	556 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	ECM7	Q06200	448 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	MLC2	Q06580	163 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	GIS3	Q12418	502 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	TRM11	Q12463	433 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	YKL068W-A	Q3E826	78 aa		4.79	□□□□□ -1.64
MSC2	YDR205W	RPS3	P05750	240 aa	Known RBP	4.78	□□□□□ -1.64
MSC2	YDR205W	BAP2	P38084	609 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	AMN1	P38285	549 aa	Predicted RBP	4.78	□□□□□ -1.64
MSC2	YDR205W	SPC72	P39723	622 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	EAF5	P39995	279 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	MXR1	P40029	184 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	FTR1	P40088	404 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	UTP8	P53276	713 aa	Known RBP	4.78	□□□□□ -1.64
MSC2	YDR205W	TRS130	Q03660	1102 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	MTQ2	Q03920	221 aa	Predicted RBP	4.78	□□□□□ -1.64
MSC2	YDR205W	PPM1	Q04081	328 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	ERV41	Q04651	352 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	EAF1	Q06337	982 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	RIO1	Q12196	484 aa	Known RBP	4.78	□□□□□ -1.64
MSC2	YDR205W	SBP1	P10080	294 aa	Known RBP	4.78	□□□□□ -1.64
MSC2	YDR205W	KIN82	P25341	720 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	AGP1	P25376	633 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	POL4	P25615	582 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	YUR1	P26725	428 aa		4.78	□□□□□ -1.64
MSC2	YDR205W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
MSC2	YDR205W	IRR1	P40541	1150 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms