RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	LRE1	P25579	583 aa	Known RBP	4.85	□□□□□ -1.63
APC4	YDR118W	GCD6	P32501	712 aa	Known RBP	4.85	□□□□□ -1.63
APC4	YDR118W	SRB2	P34162	210 aa		4.85	□□□□□ -1.63
APC4	YDR118W	ABZ1	P37254	787 aa	Predicted RBP	4.85	□□□□□ -1.63
APC4	YDR118W	POA1	P38218	177 aa		4.85	□□□□□ -1.63
APC4	YDR118W	SHE3	P38272	425 aa	Known RBP	4.85	□□□□□ -1.63
APC4	YDR118W	SLX1	P38324	304 aa		4.85	□□□□□ -1.63
APC4	YDR118W	PCA1	P38360	1216 aa		4.85	□□□□□ -1.63
APC4	YDR118W	MSG5	P38590	489 aa		4.85	□□□□□ -1.63
APC4	YDR118W	SOL3	P38858	249 aa		4.85	□□□□□ -1.63
APC4	YDR118W	XDJ1	P39102	459 aa		4.85	□□□□□ -1.63
APC4	YDR118W	KHA1	P40309	873 aa		4.85	□□□□□ -1.63
APC4	YDR118W	YNL320W	P42840	284 aa		4.85	□□□□□ -1.63
APC4	YDR118W	POL31	P46957	487 aa		4.85	□□□□□ -1.63
APC4	YDR118W	NMD5	P46970	1048 aa		4.85	□□□□□ -1.63
APC4	YDR118W	TCB2	P48231	1178 aa		4.85	□□□□□ -1.63
APC4	YDR118W	YRR1	Q12172	810 aa		4.85	□□□□□ -1.63
APC4	YDR118W	YKL068W-A	Q3E826	78 aa		4.85	□□□□□ -1.63
APC4	YDR118W	RAD10	P06838	210 aa		4.85	□□□□□ -1.63
APC4	YDR118W	TUB3	P09734	445 aa	Known RBP	4.85	□□□□□ -1.63
APC4	YDR118W	LAS1	P36146	502 aa	Predicted RBP	4.85	□□□□□ -1.63
APC4	YDR118W	CCL1	P37366	393 aa		4.85	□□□□□ -1.63
APC4	YDR118W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
APC4	YDR118W	ECM2	P38241	364 aa	Known RBP	4.85	□□□□□ -1.63
APC4	YDR118W	SWC5	P38326	303 aa		4.85	□□□□□ -1.63
APC4	YDR118W	MVP1	P40959	511 aa	Known RBP	4.85	□□□□□ -1.63
APC4	YDR118W	YFL040W	P43562	540 aa		4.85	□□□□□ -1.63
APC4	YDR118W	YML6	P51998	286 aa		4.85	□□□□□ -1.63
APC4	YDR118W	SCY1	P53009	804 aa		4.85	□□□□□ -1.63
APC4	YDR118W	SLG1	P54867	378 aa		4.85	□□□□□ -1.63
APC4	YDR118W	SKY1	Q03656	742 aa		4.85	□□□□□ -1.63
APC4	YDR118W	NUT2	Q06213	157 aa		4.85	□□□□□ -1.63
APC4	YDR118W	VPS5	Q92331	675 aa		4.85	□□□□□ -1.63
APC4	YDR118W	HAP2	P06774	265 aa		4.84	□□□□□ -1.63
APC4	YDR118W	RPA135	P22138	1203 aa	Known RBP	4.84	□□□□□ -1.63
APC4	YDR118W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
APC4	YDR118W	ADK2	P26364	225 aa		4.84	□□□□□ -1.63
APC4	YDR118W	SLA2	P33338	968 aa		4.84	□□□□□ -1.63
APC4	YDR118W	MRPL7	P36519	292 aa		4.84	□□□□□ -1.63
APC4	YDR118W	HSL7	P38274	827 aa		4.84	□□□□□ -1.63
APC4	YDR118W	SPP381	P38282	291 aa	Predicted RBP	4.84	□□□□□ -1.63
APC4	YDR118W	YHR202W	P38887	602 aa		4.84	□□□□□ -1.63
APC4	YDR118W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
APC4	YDR118W	SAP1	P39955	897 aa	Known RBP	4.84	□□□□□ -1.63
APC4	YDR118W	FIR1	P40020	876 aa		4.84	□□□□□ -1.63
APC4	YDR118W	YMR134W	P40207	237 aa		4.84	□□□□□ -1.63
APC4	YDR118W	YIL054W	P40524	105 aa		4.84	□□□□□ -1.63
APC4	YDR118W	PFD1	P46988	109 aa		4.84	□□□□□ -1.63
APC4	YDR118W	YNL040W	P53960	456 aa	Predicted RBP	4.84	□□□□□ -1.63
APC4	YDR118W	ELP3	Q02908	557 aa	Known RBP	4.84	□□□□□ -1.63
APC4	YDR118W	SPP1	Q03012	353 aa		4.84	□□□□□ -1.63
APC4	YDR118W	RPN4	Q03465	531 aa		4.84	□□□□□ -1.63
APC4	YDR118W	KAP95	Q06142	861 aa	Known RBP	4.84	□□□□□ -1.63
APC4	YDR118W	VPS13	Q07878	3144 aa		4.84	□□□□□ -1.63
APC4	YDR118W	RAD1	P06777	1100 aa		4.84	□□□□□ -1.64
APC4	YDR118W	MSD1	P15179	658 aa	Known RBP	4.84	□□□□□ -1.64
APC4	YDR118W	AEP2	P22136	580 aa		4.84	□□□□□ -1.64
APC4	YDR118W	GPI10	P30777	616 aa		4.84	□□□□□ -1.64
APC4	YDR118W	MUD2	P36084	527 aa	Known RBP	4.84	□□□□□ -1.64
APC4	YDR118W	VHC1	P38329	1120 aa		4.84	□□□□□ -1.64
APC4	YDR118W	LYS9	P38999	446 aa		4.84	□□□□□ -1.64
APC4	YDR118W	AVT2	P39981	480 aa		4.84	□□□□□ -1.64
APC4	YDR118W	ARG2	P40360	574 aa		4.84	□□□□□ -1.64
APC4	YDR118W	TMA108	P40462	946 aa		4.84	□□□□□ -1.64
APC4	YDR118W	OPT1	P40897	799 aa		4.84	□□□□□ -1.64
APC4	YDR118W	YNL247W	P53852	767 aa	Known RBP	4.84	□□□□□ -1.64
APC4	YDR118W	YNL011C	P53980	444 aa		4.84	□□□□□ -1.64
APC4	YDR118W	CDC55	Q00362	526 aa		4.84	□□□□□ -1.64
APC4	YDR118W	PRM6	Q04705	352 aa		4.84	□□□□□ -1.64
APC4	YDR118W	TAF9	Q05027	157 aa		4.84	□□□□□ -1.64
APC4	YDR118W	THI7	Q05998	598 aa		4.84	□□□□□ -1.64
APC4	YDR118W	CIR2	Q08822	631 aa		4.84	□□□□□ -1.64
APC4	YDR118W	ACM1	Q08981	209 aa		4.84	□□□□□ -1.64
APC4	YDR118W	GPM2	Q12008	311 aa		4.84	□□□□□ -1.64
APC4	YDR118W	TAF10	Q12030	206 aa		4.84	□□□□□ -1.64
APC4	YDR118W	YDR018C	Q12185	396 aa		4.84	□□□□□ -1.64
APC4	YDR118W	YPK1	P12688	680 aa	Known RBP	4.83	□□□□□ -1.64
APC4	YDR118W	SPO16	P17122	198 aa		4.83	□□□□□ -1.64
APC4	YDR118W	SLY1	P22213	666 aa		4.83	□□□□□ -1.64
APC4	YDR118W	MEI4	P29467	408 aa		4.83	□□□□□ -1.64
APC4	YDR118W	PLC1	P32383	869 aa		4.83	□□□□□ -1.64
APC4	YDR118W	ECM32	P32644	1121 aa	Known RBP	4.83	□□□□□ -1.64
APC4	YDR118W	TKL2	P33315	681 aa		4.83	□□□□□ -1.64
APC4	YDR118W	WHI3	P34761	661 aa	Known RBP	4.83	□□□□□ -1.64
APC4	YDR118W	APN2	P38207	520 aa		4.83	□□□□□ -1.64
APC4	YDR118W	SAW1	P39735	261 aa		4.83	□□□□□ -1.64
APC4	YDR118W	YEL023C	P39992	682 aa		4.83	□□□□□ -1.64
APC4	YDR118W	MKT1	P40850	830 aa	Known RBP	4.83	□□□□□ -1.64
APC4	YDR118W	SAP185	P40856	1058 aa		4.83	□□□□□ -1.64
APC4	YDR118W	YJR039W	P47107	1121 aa		4.83	□□□□□ -1.64
APC4	YDR118W	YJR142W	P47173	342 aa		4.83	□□□□□ -1.64
APC4	YDR118W	RPL22B	P56628	122 aa	Known RBP	4.83	□□□□□ -1.64
APC4	YDR118W	VPS16	Q03308	798 aa		4.83	□□□□□ -1.64
APC4	YDR118W	RKM2	Q03942	479 aa		4.83	□□□□□ -1.64
APC4	YDR118W	PIB1	Q06651	286 aa		4.83	□□□□□ -1.64
APC4	YDR118W	FMP25	Q08023	583 aa		4.83	□□□□□ -1.64
APC4	YDR118W	RCL1	Q08096	367 aa	Predicted RBP	4.83	□□□□□ -1.64
APC4	YDR118W	THI20	Q08224	551 aa		4.83	□□□□□ -1.64
APC4	YDR118W	DDC1	Q08949	612 aa		4.83	□□□□□ -1.64
APC4	YDR118W	NBP2	Q12163	236 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms