RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	CDC26	P14724	124 aa		4.04	□□□□□ -1.76
SLU7	YDR088C	FRS1	P15624	595 aa	Known RBP	4.04	□□□□□ -1.76
SLU7	YDR088C	NUP1	P20676	1076 aa		4.04	□□□□□ -1.76
SLU7	YDR088C	ATP12	P22135	325 aa		4.04	□□□□□ -1.76
SLU7	YDR088C	AEP2	P22136	580 aa		4.04	□□□□□ -1.76
SLU7	YDR088C	RPA135	P22138	1203 aa	Known RBP	4.04	□□□□□ -1.76
SLU7	YDR088C	PLC1	P32383	869 aa		4.04	□□□□□ -1.76
SLU7	YDR088C	PET127	P32606	800 aa		4.04	□□□□□ -1.76
SLU7	YDR088C	IES1	P43579	692 aa		4.04	□□□□□ -1.76
SLU7	YDR088C	FMP30	Q02883	468 aa		4.04	□□□□□ -1.76
SLU7	YDR088C	THI22	Q06490	572 aa		4.04	□□□□□ -1.76
SLU7	YDR088C	YPT7	P32939	208 aa		4.03	□□□□□ -1.76
SLU7	YDR088C	GMH1	P36125	273 aa		4.03	□□□□□ -1.76
SLU7	YDR088C	PEX14	P53112	341 aa		4.03	□□□□□ -1.76
SLU7	YDR088C	PGK1	P00560	416 aa	Known RBP	4.02	□□□□□ -1.77
SLU7	YDR088C	ERG20	P08524	352 aa	Known RBP	4.02	□□□□□ -1.77
SLU7	YDR088C	PEX1	P24004	1043 aa		4.02	□□□□□ -1.77
SLU7	YDR088C	HXT4	P32467	576 aa		4.02	□□□□□ -1.77
SLU7	YDR088C	DUN1	P39009	513 aa		4.02	□□□□□ -1.77
SLU7	YDR088C	LTP1	P40347	161 aa		4.02	□□□□□ -1.77
SLU7	YDR088C	BUD8	P41698	603 aa		4.02	□□□□□ -1.77
SLU7	YDR088C	BIT61	P47041	543 aa		4.02	□□□□□ -1.77
SLU7	YDR088C	SKY1	Q03656	742 aa		4.02	□□□□□ -1.77
SLU7	YDR088C	ECM38	Q05902	660 aa	Predicted RBP	4.02	□□□□□ -1.77
SLU7	YDR088C	COX11	P19516	300 aa	Known RBP	4.01	□□□□□ -1.77
SLU7	YDR088C	HEM12	P32347	362 aa	Predicted RBP	4.01	□□□□□ -1.77
SLU7	YDR088C	BIT2	P38346	545 aa		4.01	□□□□□ -1.77
SLU7	YDR088C	RNR4	P49723	345 aa	Known RBP	4.01	□□□□□ -1.77
SLU7	YDR088C	YNL034W	P53963	612 aa		4.01	□□□□□ -1.77
SLU7	YDR088C	YNL018C	P53976	612 aa		4.01	□□□□□ -1.77
SLU7	YDR088C	POM34	Q12445	299 aa		4.01	□□□□□ -1.77
SLU7	YDR088C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
SLU7	YDR088C	KCC4	P25389	1037 aa		4	□□□□□ -1.77
SLU7	YDR088C	YUR1	P26725	428 aa		4	□□□□□ -1.77
SLU7	YDR088C	SEC6	P32844	805 aa		4	□□□□□ -1.77
SLU7	YDR088C	MIT1	P40002	666 aa		4	□□□□□ -1.77
SLU7	YDR088C	YIL077C	P40508	320 aa		4	□□□□□ -1.77
SLU7	YDR088C	PEX8	P53248	589 aa		4	□□□□□ -1.77
SLU7	YDR088C	SPC98	P53540	846 aa		4	□□□□□ -1.77
SLU7	YDR088C	TGL2	P54857	326 aa		4	□□□□□ -1.77
SLU7	YDR088C	VBA4	Q04602	768 aa	Known RBP	4	□□□□□ -1.77
SLU7	YDR088C	RPS9B	P05755	195 aa	Known RBP	3.99	□□□□□ -1.77
SLU7	YDR088C	FEN2	P25621	512 aa	Known RBP	3.99	□□□□□ -1.77
SLU7	YDR088C	YMC1	P32331	307 aa		3.99	□□□□□ -1.77
SLU7	YDR088C	BCS1	P32839	456 aa		3.99	□□□□□ -1.77
SLU7	YDR088C	YMC2	P38087	329 aa		3.99	□□□□□ -1.77
SLU7	YDR088C	KSP1	P38691	1029 aa	Known RBP	3.99	□□□□□ -1.77
SLU7	YDR088C	BPL1	P48445	690 aa	Predicted RBP	3.99	□□□□□ -1.77
SLU7	YDR088C	RFX1	P48743	811 aa		3.99	□□□□□ -1.77
SLU7	YDR088C	SPC105	P53148	917 aa		3.99	□□□□□ -1.77
SLU7	YDR088C	YGR151C	P53287	111 aa		3.99	□□□□□ -1.77
SLU7	YDR088C	MPS1	P54199	764 aa		3.99	□□□□□ -1.77
SLU7	YDR088C	SND1	Q04007	877 aa		3.99	□□□□□ -1.77
SLU7	YDR088C	PHM6	Q05637	104 aa		3.99	□□□□□ -1.77
SLU7	YDR088C	NGL1	Q08213	363 aa	Known RBP	3.99	□□□□□ -1.77
SLU7	YDR088C	CLF1	Q12309	687 aa	Predicted RBP	3.99	□□□□□ -1.77
SLU7	YDR088C	KAR1	P11927	433 aa		3.98	□□□□□ -1.77
SLU7	YDR088C	SAT4	P25333	603 aa	Known RBP	3.98	□□□□□ -1.77
SLU7	YDR088C	MF(ALPHA)2	P32435	120 aa		3.98	□□□□□ -1.77
SLU7	YDR088C	PMC1	P38929	1173 aa	Predicted RBP	3.98	□□□□□ -1.77
SLU7	YDR088C	EAF5	P39995	279 aa		3.98	□□□□□ -1.77
SLU7	YDR088C	TAF4	P50105	388 aa		3.98	□□□□□ -1.77
SLU7	YDR088C	PEX15	Q08215	383 aa		3.98	□□□□□ -1.77
SLU7	YDR088C	DIA2	Q08496	732 aa	Predicted RBP	3.98	□□□□□ -1.77
SLU7	YDR088C	CHS5	Q12114	671 aa	Known RBP	3.98	□□□□□ -1.77
SLU7	YDR088C	MPD2	Q99316	277 aa		3.98	□□□□□ -1.77
SLU7	YDR088C	PHO5	P00635	467 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	ADE5,7	P07244	802 aa	Known RBP	3.97	□□□□□ -1.77
SLU7	YDR088C	TUP1	P16649	713 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
SLU7	YDR088C	APN1	P22936	367 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	KIN82	P25341	720 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	PRE4	P30657	266 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	MSS1	P32559	526 aa	Predicted RBP	3.97	□□□□□ -1.77
SLU7	YDR088C	MTC7	P32633	139 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	GRX7	P38068	203 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	COS111	P38308	924 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	YHR033W	P38690	423 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	PIG2	P40187	538 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	PXA1	P41909	870 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	TAX4	P47030	604 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	ASN1	P49089	572 aa	Known RBP	3.97	□□□□□ -1.77
SLU7	YDR088C	TDA9	Q04545	1251 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	YFT2	Q06676	274 aa		3.97	□□□□□ -1.77
SLU7	YDR088C	DGR2	P32330	852 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	UGP1	P32861	499 aa	Known RBP	3.96	□□□□□ -1.78
SLU7	YDR088C	YHR097C	P38809	366 aa	Known RBP	3.96	□□□□□ -1.78
SLU7	YDR088C	CRG1	P38892	291 aa	RIP-Chip data	3.96	□□□□□ -1.78	not detected
SLU7	YDR088C	PEA2	P40091	420 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	PRM2	P40534	656 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	IRC5	P43610	853 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	YJR008W	P47085	338 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	SLD3	P53135	668 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	SPO1	P53541	631 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	TIM50	Q02776	476 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	NSE5	Q03718	556 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	CIR2	Q08822	631 aa		3.96	□□□□□ -1.78
SLU7	YDR088C	CWC2	Q12046	339 aa	Predicted RBP	3.96	□□□□□ -1.78
SLU7	YDR088C	YEL076C-A	P0CX16	216 aa		3.95	□□□□□ -1.78
SLU7	YDR088C	YLR464W	P0CX17	216 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms