RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Krt40Q6IFX3 439 aa17.08■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Tmem130Q6NXM3 419 aa17.08■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Il1rapl2Q9ERS6 686 aa17.08■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 FliiQ9JJ28 1271 aa17.08■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Chd5A2A8L1 1946 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Rbbp8nlA2ABX0 614 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Adam7O35227 789 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 NpeppsQ11011 920 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Calr4Q3TQS0 420 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Foxn1Q61575 648 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Edrf1Q6GQV7 1239 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Ptpdc1Q6NZK8 747 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Ankrd13aQ80UP5 588 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Cfap69Q8BH53 942 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Map10Q8BJS7 891 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 1700018B08RikQ9DA83 213 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Mkrn1Q9QXP6 481 aa17.07■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Brd1E9PZ26 1189 aaKnown RBP17.06■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Gxylt1Q3UHH8 404 aa17.06■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Q3UJP5 209 aa17.06■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Il17raQ60943 864 aa17.06■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Atl3Q91YH5 541 aa17.06■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Epb41l3Q9WV92 929 aa17.06■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 AfdnQ9QZQ1 1820 aaKnown RBP17.06■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Evi5P97366 809 aa17.05■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Cgnl1Q6AW69 1298 aa17.05■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Tm4sf4Q91XD3 202 aa17.05■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 MthfsQ9D110 203 aa17.05■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Erc2Q6PH08 957 aa17.04■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Col20a1Q923P0 1320 aa17.04■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 SisF8VQM5 1818 aa17.04■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Krt24A1L317 512 aa17.03■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Hmox1P14901 289 aa17.03■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Cacnb3P54285 484 aa17.03■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Cetn4Q8K4K1 168 aa17.03■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Hps4Q99KG7 671 aa17.03■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Sik3Q6P4S6 1311 aa17.03■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Npc1l1Q6T3U4 1333 aa17.03■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Adgra3Q7TT36 1310 aa17.03■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Pnmal2G3X9N3 661 aa17.02■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Grem2O88273 168 aa17.02■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 CnpP16330 420 aa17.02■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Mcm2P97310 904 aa17.02■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 Smc5Q8CG46 1101 aaKnown RBP17.02■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 IcoslgQ9JHJ8 322 aa17.02■□□□□ 0.32
Ccdc171-204ENSMUST00000126429 CalcaP70160 136 aa17.02■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Tbc1d2bQ3U0J8 965 aa17.02■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Abhd15Q5F2F2 459 aa17.02■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Cyp24a1Q64441 514 aa17.02■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Lmod1Q8BVA4 595 aa17.02■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Brf1Q8CFK2 676 aa17.02■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Celf2Q9Z0H4 508 aaKnown RBP17.02■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Gm42688A0A0R3P9D1 673 aa17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Nova2D3YVV7 556 aaKnown RBP17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Cxcl9P18340 126 aa17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Myo1bP46735 1107 aa17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Dynll1P63168 89 aa17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Ccdc142Q8CAI1 738 aa17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Rhot2Q8JZN7 620 aa17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Borcs6Q9D6W8 360 aa17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Cxcl11Q9JHH5 100 aa17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Rbm6S4R1W5 1118 aaKnown RBP17.01■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Lbhd1A0A087WPA0 259 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Hoxa7P02830 229 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Cyp2d10P24456 504 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Ppp4cP97470 307 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Esyt2Q3TZZ7 845 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Lins1Q3U1D0 764 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Klrg2Q3UM83 387 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Mansc4Q3UU94 337 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Tmprss11eQ5S248 423 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Sez6lQ6P1D5 963 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Ppp4r3bQ922R5 820 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Zbed3Q9D0L1 228 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Telo2Q9DC40 840 aaKnown RBP17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Zcchc17Q9ESX4 241 aaKnown RBP17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Stk3Q9JI10 497 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Pus3Q9JI38 481 aa17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Ddx20Q9JJY4 825 aaKnown RBP17■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Flvcr1B2RXV4 560 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Prpmp5E9PXN1 296 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Dhx16G3X8X0 1044 aaKnown RBP16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Gas1Q01721 343 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Washc4Q3UMB9 1173 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Ankrd13cQ3UX43 541 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Lamc2Q61092 1191 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 RubcnQ80U62 956 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Kcnc4Q8R1C0 628 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Pla2g12bQ99P27 195 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 RabggtaQ9JHK4 567 aa16.99■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Pcdh15Q99PJ1 1943 aa16.98■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Prss51A0A286YDY8 319 aa16.98■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Pet2A2AHY8 747 aa16.98■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Cyp2d9P11714 504 aa16.98■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Fdx1P46656 188 aa16.98■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Akap4Q60662 849 aa16.98■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Psen2Q61144 448 aa16.98■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Myh13B1AR69 1938 aa16.98■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Aox4Q3TYQ9 1336 aa16.97■□□□□ 0.31
Ccdc171-204ENSMUST00000126429 Zkscan2G3X952 960 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms